Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:25 (547015): wrapper (7.7.26015): starting
16:10:25 (547015): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:10:25] Arguments: --nthreads 4
[2026-03-15 16:10:25] Threads: 4
[2026-03-15 16:10:25] Checking for CVMFS
[2026-03-15 16:10:25] No cvmfs_config command found, will try listing directly
[2026-03-15 16:10:25] CVMFS is ok
[2026-03-15 16:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:10:25] Further information can be found at the LHC@home message board.
[2026-03-15 16:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:10:25] Checking for apptainer binary...
[2026-03-15 16:10:25] which: no apptainer in ((null))
[2026-03-15 16:10:25] apptainer is not installed, using version from CVMFS
[2026-03-15 16:10:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:10:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-15 16:10:26] apptainer works
[2026-03-15 16:10:26] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:10:26] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:10:26] Starting ATLAS job with PandaID=7046546968
[2026-03-15 16:10:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 17:28:17]  *** The last 200 lines of the pilot log: ***
[2026-03-15 17:28:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 17:28:17]  replicas=None
[2026-03-15 17:28:17]  scope=mc23_13p6TeV
[2026-03-15 17:28:17]  status=None
[2026-03-15 17:28:17]  status_code=0
[2026-03-15 17:28:17]  storage_token=
[2026-03-15 17:28:17]  surl=/var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/log.48955010._041800.job.log.tgz.1
[2026-03-15 17:28:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/8a/log.48955010._041800.job.log.tgz.1
[2026-03-15 17:28:17]  workdir=None
[2026-03-15 17:28:17] ]
[2026-03-15 17:28:17] 2026-03-15 16:27:38,237 | INFO     | transferring file log.48955010._041800.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/log.48955010._041800.job.log.tgz.1 to /var/lib/b
[2026-03-15 17:28:17] 2026-03-15 16:27:38,237 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/log.48955010._041800.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/3/lo
[2026-03-15 17:28:17] 2026-03-15 16:27:38,255 | INFO     | adding to output.list: log.48955010._041800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/8a/log.48955010._041800.job.log.tg
[2026-03-15 17:28:17] 2026-03-15 16:27:38,255 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 17:28:17] 2026-03-15 16:27:38,255 | INFO     | summary of transferred files:
[2026-03-15 17:28:17] 2026-03-15 16:27:38,255 | INFO     |  -- lfn=log.48955010._041800.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 17:28:17] 2026-03-15 16:27:38,256 | INFO     | stage-out finished correctly
[2026-03-15 17:28:17] 2026-03-15 16:27:39,233 | INFO     | time since job start (4620s) is within the limit (345600.0s)
[2026-03-15 17:28:17] 2026-03-15 16:27:40,917 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 17:28:17] 2026-03-15 16:27:41,238 | INFO     | time since job start (4622s) is within the limit (345600.0s)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,244 | INFO     | time since job start (4624s) is within the limit (345600.0s)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,328 | WARNING  | process 563767 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 17:28:17] 2026-03-15 16:27:43,329 | INFO     | using path: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,329 | INFO     | using path: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,329 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 17:28:17] 2026-03-15 16:27:43,329 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 17:28:17] 2026-03-15 16:27:43,558 | INFO     | job 7046546968 has state=finished
[2026-03-15 17:28:17] 2026-03-15 16:27:43,558 | INFO     | preparing for final server update for job 7046546968 in state='finished'
[2026-03-15 17:28:17] 2026-03-15 16:27:43,559 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/jobReport.json
[2026-03-15 17:28:17] 2026-03-15 16:27:43,560 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/3/workernode_map.json
[2026-03-15 17:28:17] 2026-03-15 16:27:43,560 | INFO     | this job has now completed (state=finished)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,560 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,561 | INFO     | log transfer has been attempted: DONE
[2026-03-15 17:28:17] 2026-03-15 16:27:43,561 | INFO     | job 7046546968 has finished - writing final server update
[2026-03-15 17:28:17] 2026-03-15 16:27:43,561 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2332256/.job.ad'
[2026-03-15 17:28:17] 2026-03-15 16:27:43,561 | INFO     | total number of processed events: 400 (read)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,584 | INFO     | using path: /var/lib/boinc/var/slot96/slots/3/PanDA_Pilot-7046546968/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,584 | INFO     | extracted standard info from prmon json
[2026-03-15 17:28:17] 2026-03-15 16:27:43,584 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 17:28:17] 2026-03-15 16:27:43,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 17:28:17] 2026-03-15 16:27:43,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 17:28:17] 2026-03-15 16:27:43,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | fitting pss+swap vs Time
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | sum of square deviations: 101843770.0
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | sum of deviations: 500957375.9999999
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | mean x: 1773589838.0
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | mean y: 2328371.072463768
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | intersect: -8721748824.270412
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | chi2: 0.0003784960473067385
[2026-03-15 17:28:17] 2026-03-15 16:27:43,586 | INFO     | current memory leak: 4.92 B/s (using 69 data points, chi2=0.00)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | could have reported an average CPU frequency of 3578 MHz (6 samples)
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | ..............................
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . Timing measurements:
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . get job = 0 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . initial setup = 5 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . payload setup = 4 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . stage-in = 0 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . payload execution = 4599 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . stage-out = 0 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | . log creation = 0 s
[2026-03-15 17:28:17] 2026-03-15 16:27:43,587 | INFO     | ..............................
[2026-03-15 17:28:17] 2026-03-15 16:27:43,866 | INFO     | number of running child processes to parent process 563767: 1
[2026-03-15 17:28:17] 2026-03-15 16:27:43,866 | INFO     | maximum number of monitored processes: 6
[2026-03-15 17:28:17] 2026-03-15 16:27:43,866 | INFO     | aborting job monitoring since job object (job id=7046546968) has expired
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | 
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | job summary report
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | --------------------------------------------------
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | PanDA job id: 7046546968
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | task id: 48955010
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | errors: (none)
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | pilot state: finished 
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | transexitcode: 0
[2026-03-15 17:28:17] 2026-03-15 16:27:44,045 | INFO     | exeerrorcode: 0
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | exeerrordiag: 
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | exitcode: 0
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | exitmsg: OK
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | cpuconsumptiontime: 17572 s
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | nevents: 400
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | neventsw: 0
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | pid: 563767
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | pgrp: 563767
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | corecount: 4
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | event service: False
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | sizes: {0: 2279929, 1: 2280219, 11: 2280219, 4607: 2306419, 4608: 2315439, 4611: 2315495, 4613: 2315817}
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | --------------------------------------------------
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | 
[2026-03-15 17:28:17] 2026-03-15 16:27:44,046 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/3
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | job 7046546968 has completed (purged errors)
[2026-03-15 17:28:17] 2026-03-15 16:27:44,066 | INFO     | overall cleanup function is called
[2026-03-15 17:28:17] 2026-03-15 16:27:45,073 | INFO     | --- collectZombieJob: --- 10, [563767]
[2026-03-15 17:28:17] 2026-03-15 16:27:45,073 | INFO     | zombie collector waiting for pid 563767
[2026-03-15 17:28:17] 2026-03-15 16:27:45,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 17:28:17] 2026-03-15 16:27:45,073 | INFO     | collected zombie processes
[2026-03-15 17:28:17] 2026-03-15 16:27:45,073 | INFO     | will attempt to kill all subprocesses of pid=563767
[2026-03-15 17:28:17] 2026-03-15 16:27:45,531 | INFO     | process IDs to be killed: [563767] (in reverse order)
[2026-03-15 17:28:17] 2026-03-15 16:27:45,767 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 17:28:17] 2026-03-15 16:27:45,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 17:28:17] 2026-03-15 16:27:45,798 | INFO     | did not find any defunct processes belonging to 563767
[2026-03-15 17:28:17] 2026-03-15 16:27:45,833 | INFO     | did not find any defunct processes belonging to 563767
[2026-03-15 17:28:17] 2026-03-15 16:27:45,833 | INFO     | ready for new job
[2026-03-15 17:28:17] 2026-03-15 16:27:45,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 17:28:17] 2026-03-15 16:27:45,835 | INFO     | **************************************
[2026-03-15 17:28:17] 2026-03-15 16:27:45,835 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 17:28:17] 2026-03-15 16:27:45,835 | INFO     | **************************************
[2026-03-15 17:28:17] 2026-03-15 16:27:45,835 | INFO     | 
[2026-03-15 17:28:17] 2026-03-15 16:27:45,841 | INFO     | architecture information:
[2026-03-15 17:28:17] 2026-03-15 16:27:45,842 | INFO     | executing command: cat /etc/os-release
[2026-03-15 17:28:17] 2026-03-15 16:27:45,857 | INFO     | cat /etc/os-release:
[2026-03-15 17:28:17] NAME="CentOS Linux"
[2026-03-15 17:28:17] VERSION="7 (Core)"
[2026-03-15 17:28:17] ID="centos"
[2026-03-15 17:28:17] ID_LIKE="rhel fedora"
[2026-03-15 17:28:17] VERSION_ID="7"
[2026-03-15 17:28:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 17:28:17] ANSI_COLOR="0;31"
[2026-03-15 17:28:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 17:28:17] HOME_URL="https://www.centos.org/"
[2026-03-15 17:28:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 17:28:17] 
[2026-03-15 17:28:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 17:28:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 17:28:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 17:28:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 17:28:17] 
[2026-03-15 17:28:17] 2026-03-15 16:27:45,857 | INFO     | **************************************
[2026-03-15 17:28:17] 2026-03-15 16:27:46,360 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/3
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | INFO     | sufficient remaining disk space (148817051648 B)
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | INFO     | update_server=False
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 17:28:17] 2026-03-15 16:27:46,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 17:28:17] 2026-03-15 16:27:46,532 | INFO     | [monitor] cgroup control has ended
[2026-03-15 17:28:17] 2026-03-15 16:27:46,792 | INFO     | all data control threads have been joined
[2026-03-15 17:28:17] 2026-03-15 16:27:46,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 17:28:17] 2026-03-15 16:27:47,287 | INFO     | all job control threads have been joined
[2026-03-15 17:28:17] 2026-03-15 16:27:47,334 | INFO     | all payload control threads have been joined
[2026-03-15 17:28:17] 2026-03-15 16:27:47,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:28:17] 2026-03-15 16:27:47,374 | INFO     | aborting loop
[2026-03-15 17:28:17] 2026-03-15 16:27:47,379 | INFO     | [job] retrieve thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:47,710 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:47,797 | INFO     | [data] control thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:47,898 | INFO     | [job] validate thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:47,978 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,150 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,151 | INFO     | [data] copytool_in thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,292 | INFO     | [job] control thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,339 | INFO     | [payload] control thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,367 | INFO     | [payload] validate_post thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,377 | INFO     | [job] job monitor thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,379 | INFO     | [data] copytool_out thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,586 | INFO     | [payload] failed_post thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:48,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:28:17] 2026-03-15 16:27:49,644 | INFO     | [job] queue monitor thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:50,975 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:56,475 | INFO     | job.realtimelogging is not enabled
[2026-03-15 17:28:17] 2026-03-15 16:27:57,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 17:28:17] 2026-03-15 16:27:59,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23181482092352)>', '<ExcThread(monitor, started 23181244249856)>']
[2026-03-15 17:28:17] 2026-03-15 16:28:04,218 | INFO     | all workflow threads have been joined
[2026-03-15 17:28:17] 2026-03-15 16:28:04,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 17:28:17] 2026-03-15 16:28:04,218 | INFO     | traces error code: 0
[2026-03-15 17:28:17] 2026-03-15 16:28:04,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 17:28:17] 2026-03-15 16:28:16,862 | INFO     | PID=557891 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | INFO     | .. there are 48 such processes running
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 17:28:17] 2026-03-15 16:28:16,863 | INFO     | [monitor] control thread has ended
[2026-03-15 17:28:17] 2026-03-15 16:28:17,029 [wrapper] ==== pilot stdout END ====
[2026-03-15 17:28:17] 2026-03-15 16:28:17,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 17:28:17] 2026-03-15 16:28:17,036 [wrapper] pilotpid: 557891
[2026-03-15 17:28:17] 2026-03-15 16:28:17,038 [wrapper] Pilot exit status: 0
[2026-03-15 17:28:17] 2026-03-15 16:28:17,048 [wrapper] pandaids: 7046546968
[2026-03-15 17:28:17] 2026-03-15 16:28:17,185 [wrapper] cleanup supervisor_pilot 1249920 557892
[2026-03-15 17:28:17] 2026-03-15 16:28:17,188 [wrapper] Test setup, not cleaning
[2026-03-15 17:28:17] 2026-03-15 16:28:17,190 [wrapper] apfmon messages muted
[2026-03-15 17:28:17] 2026-03-15 16:28:17,192 [wrapper] ==== wrapper stdout END ====
[2026-03-15 17:28:17] 2026-03-15 16:28:17,194 [wrapper] ==== wrapper stderr END ====
[2026-03-15 17:28:17]  *** Error codes and diagnostics ***
[2026-03-15 17:28:17]     "exeErrorCode": 0,
[2026-03-15 17:28:17]     "exeErrorDiag": "",
[2026-03-15 17:28:17]     "pilotErrorCode": 0,
[2026-03-15 17:28:17]     "pilotErrorDiag": "",
[2026-03-15 17:28:17]  *** Listing of results directory ***
[2026-03-15 17:28:17] total 618296
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc    585013 Mar 14 10:56 pilot3.tar.gz
[2026-03-15 17:28:17] -rwx------. 1 boinc boinc     36322 Mar 14 11:00 runpilot2-wrapper.sh
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc      5111 Mar 14 11:01 queuedata.json
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 17:28:17] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:10 run_atlas
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:10 job.xml
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc 443488606 Mar 15 16:10 EVNT.46701403._001856.pool.root.1
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:10 start_atlas.sh
[2026-03-15 17:28:17] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:10 shared
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:10 input.tar.gz
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc      6708 Mar 15 16:10 init_data.xml
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:10 boinc_lockfile
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc      2564 Mar 15 16:10 pandaJob.out
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc   1006481 Mar 15 16:10 agis_schedconf.cvmfs.json
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc   1511579 Mar 15 16:10 agis_ddmendpoints.agis.ALL.json
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc       444 Mar 15 16:10 workernode_map.json
[2026-03-15 17:28:17] drwx------. 5 boinc boinc      4096 Mar 15 16:10 pilot3
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc 183827425 Mar 15 17:27 HITS.48955010._041800.pool.root.1
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc       530 Mar 15 17:27 boinc_task_state.xml
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc      1026 Mar 15 17:27 memory_monitor_summary.json
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc    262485 Mar 15 17:27 log.48955010._041800.job.log.tgz.1
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc      6346 Mar 15 17:27 heartbeat.json
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc      8192 Mar 15 17:27 boinc_mmap_file
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc        27 Mar 15 17:27 wrapper_checkpoint.txt
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc       822 Mar 15 17:28 pilotlog.txt
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc        95 Mar 15 17:28 pilot_heartbeat.json
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc    678519 Mar 15 17:28 log.48955010._041800.job.log.1
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc       357 Mar 15 17:28 output.list
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc       620 Mar 15 17:28 runtime_log
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc    962560 Mar 15 17:28 result.tar.gz
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc      9204 Mar 15 17:28 runtime_log.err
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc       662 Mar 15 17:28 ZILODm9xaL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxssLDms3F8Ln.diag
[2026-03-15 17:28:17] -rw-r--r--. 1 boinc boinc     21827 Mar 15 17:28 stderr.txt
[2026-03-15 17:28:17] HITS file was successfully produced:
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc 183827425 Mar 15 17:27 shared/HITS.pool.root.1
[2026-03-15 17:28:17]  *** Contents of shared directory: ***
[2026-03-15 17:28:17] total 614164
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc 443488606 Mar 15 16:10 ATLAS.root_0
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:10 start_atlas.sh
[2026-03-15 17:28:17] -rw-r--r--. 2 boinc boinc    597528 Mar 15 16:10 input.tar.gz
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc 183827425 Mar 15 17:27 HITS.pool.root.1
[2026-03-15 17:28:17] -rw-------. 1 boinc boinc    962560 Mar 15 17:28 result.tar.gz
17:28:18 (547015): run_atlas exited; CPU time 17787.146271
17:28:18 (547015): called boinc_finish(0)

</stderr_txt>
]]>

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