Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:47:46 (524457): wrapper (7.7.26015): starting
08:47:46 (524457): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 08:47:46] Arguments: --nthreads 12
[2026-03-14 08:47:46] Threads: 12
[2026-03-14 08:47:46] Checking for CVMFS
[2026-03-14 08:47:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 08:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 08:47:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 08:47:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 08:47:48] 2.11.5.0 3459277 148910 260164 157282 1 534 35198743 45568001 20668 130560 0 1351224796 99.818 775576170 20252 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-14 08:47:48] CVMFS is ok
[2026-03-14 08:47:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 08:47:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 08:47:48] Further information can be found at the LHC@home message board.
[2026-03-14 08:47:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 08:47:48] Checking for apptainer binary...
[2026-03-14 08:47:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 08:47:48] Running /usr/bin/apptainer --version
[2026-03-14 08:47:48] apptainer version 1.4.1-1.el9
[2026-03-14 08:47:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 08:47:49] wns0066.triumf.lcg
[2026-03-14 08:47:49] apptainer works
[2026-03-14 08:47:49] Set ATHENA_PROC_NUMBER=12
[2026-03-14 08:47:49] Set ATHENA_CORE_NUMBER=12
[2026-03-14 08:47:49] Starting ATLAS job with PandaID=7046546930
[2026-03-14 08:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 08:52:34]  *** The last 200 lines of the pilot log: ***
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | wrong length of table data, x=[1773503360.0], y=[1840.0] (must be same and length>=4)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | could have reported an average CPU frequency of 2677 MHz (4 samples)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . Timing measurements:
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . get job = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . initial setup = 14 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload setup = 26 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-in = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload execution = 52 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-out = 1 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . log creation = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046546930/pilotlog.txt
[2026-03-14 08:52:34] 2026-03-14 15:51:52,682 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-14 08:52:34] - Log from pilotlog.txt -
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7046546930/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | extracted standard info from prmon json
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | wrong length of table data, x=[1773503360.0], y=[1840.0] (must be same and length>=4)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | could have reported an average CPU frequency of 2677 MHz (4 samples)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . Timing measurements:
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . get job = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . initial setup = 14 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload setup = 26 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-in = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload execution = 52 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-out = 1 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . log creation = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046546930/pilotlog.txt
[2026-03-14 08:52:34] 2026-03-14 15:51:52,682 | WARNING  | 
[2026-03-14 08:52:34] [begin log extracts]
[2026-03-14 08:52:34] - Log from pilotlog.txt -
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7046546930/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | extracted standard info from prmon json
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 08:52:34] 2026-03-14 15:51:52,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | WARNING  | wrong length of table data, x=[1773503360.0], y=[1840.0] (must be same and length>=4)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | could have reported an average CPU frequency of 2677 MHz (4 samples)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,574 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . Timing measurements:
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . get job = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . initial setup = 14 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload setup = 26 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-in = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . payload execution = 52 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . stage-out = 1 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | . log creation = 0 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | ..............................
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-14 08:52:34] 2026-03-14 15:51:52,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7046546930/pilotlog.txt
[2026-03-14 08:52:34] [end log extracts]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,683 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,683 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | 
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | job summary report
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | --------------------------------------------------
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | PanDA job id: 7046546930
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | task id: 48955010
[2026-03-14 08:52:34] 2026-03-14 15:51:52,786 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-14 08:49:44,436 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | pilot state: failed 
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | transexitcode: 65
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | exeerrorcode: 65
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | exitcode: 65
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | cpuconsumptiontime: 14 s
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | nevents: 0
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | neventsw: 0
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | pid: 532806
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | pgrp: 532806
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | corecount: 12
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | event service: False
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | sizes: {0: 2279090, 1: 2279772, 2: 2279772, 3: 2280261, 82: 2303567, 83: 2303571, 85: 2308075, 201: 2308213}
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | --------------------------------------------------
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | 
[2026-03-14 08:52:34] 2026-03-14 15:51:52,787 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-14 08:52:34] 2026-03-14 15:51:52,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,909 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,909 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 08:52:34] 2026-03-14 15:51:52,909 | INFO     | job 7046546930 has completed (purged errors)
[2026-03-14 08:52:34] 2026-03-14 15:51:52,909 | INFO     | overall cleanup function is called
[2026-03-14 08:52:34] 2026-03-14 15:51:53,916 | INFO     | --- collectZombieJob: --- 10, [532806]
[2026-03-14 08:52:34] 2026-03-14 15:51:53,916 | INFO     | zombie collector waiting for pid 532806
[2026-03-14 08:52:34] 2026-03-14 15:51:53,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 08:52:34] 2026-03-14 15:51:53,916 | INFO     | collected zombie processes
[2026-03-14 08:52:34] 2026-03-14 15:51:53,916 | INFO     | will attempt to kill all subprocesses of pid=532806
[2026-03-14 08:52:34] 2026-03-14 15:51:54,305 | INFO     | process IDs to be killed: [532806] (in reverse order)
[2026-03-14 08:52:34] 2026-03-14 15:51:54,378 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 08:52:34] 2026-03-14 15:51:54,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 08:52:34] 2026-03-14 15:51:54,386 | INFO     | did not find any defunct processes belonging to 532806
[2026-03-14 08:52:34] 2026-03-14 15:51:54,393 | INFO     | did not find any defunct processes belonging to 532806
[2026-03-14 08:52:34] 2026-03-14 15:51:54,393 | INFO     | ready for new job
[2026-03-14 08:52:34] 2026-03-14 15:51:54,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 08:52:34] 2026-03-14 15:51:54,395 | INFO     | **************************************
[2026-03-14 08:52:34] 2026-03-14 15:51:54,395 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 08:52:34] 2026-03-14 15:51:54,395 | INFO     | **************************************
[2026-03-14 08:52:34] 2026-03-14 15:51:54,395 | INFO     | 
[2026-03-14 08:52:34] 2026-03-14 15:51:54,397 | INFO     | architecture information:
[2026-03-14 08:52:34] 2026-03-14 15:51:54,397 | INFO     | executing command: cat /etc/os-release
[2026-03-14 08:52:34] 2026-03-14 15:51:54,475 | INFO     | cat /etc/os-release:
[2026-03-14 08:52:34] NAME="CentOS Linux"
[2026-03-14 08:52:34] VERSION="7 (Core)"
[2026-03-14 08:52:34] ID="centos"
[2026-03-14 08:52:34] ID_LIKE="rhel fedora"
[2026-03-14 08:52:34] VERSION_ID="7"
[2026-03-14 08:52:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 08:52:34] ANSI_COLOR="0;31"
[2026-03-14 08:52:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 08:52:34] HOME_URL="https://www.centos.org/"
[2026-03-14 08:52:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 08:52:34] 
[2026-03-14 08:52:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 08:52:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 08:52:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 08:52:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 08:52:34] 
[2026-03-14 08:52:34] 2026-03-14 15:51:54,475 | INFO     | **************************************
[2026-03-14 08:52:34] 2026-03-14 15:51:54,987 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-14 08:52:34] 2026-03-14 15:51:55,015 | INFO     | sufficient remaining disk space (1963740626944 B)
[2026-03-14 08:52:34] 2026-03-14 15:51:55,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 08:52:34] 2026-03-14 15:51:55,017 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 08:52:34] 2026-03-14 15:51:55,017 | INFO     | update_server=False
[2026-03-14 08:52:34] 2026-03-14 15:51:55,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 08:52:34] 2026-03-14 15:51:55,038 | INFO     | all job control threads have been joined
[2026-03-14 08:52:34] 2026-03-14 15:51:55,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 08:52:34] 2026-03-14 15:51:55,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 08:52:34] 2026-03-14 15:51:55,544 | INFO     | all data control threads have been joined
[2026-03-14 08:52:34] 2026-03-14 15:51:55,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:52:34] 2026-03-14 15:51:55,818 | INFO     | aborting loop
[2026-03-14 08:52:34] 2026-03-14 15:51:56,023 | INFO     | [job] retrieve thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,044 | INFO     | [job] control thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,108 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,111 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,418 | INFO     | [payload] failed_post thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,471 | INFO     | all payload control threads have been joined
[2026-03-14 08:52:34] 2026-03-14 15:51:56,550 | INFO     | [data] control thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:56,824 | INFO     | [job] job monitor thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,083 | INFO     | [job] validate thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,085 | INFO     | [data] copytool_out thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,138 | INFO     | [data] copytool_in thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,146 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,212 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,245 | INFO     | [payload] validate_post thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,477 | INFO     | [payload] control thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:57,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:52:34] 2026-03-14 15:51:58,807 | INFO     | [job] queue monitor thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:51:59,554 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 08:52:34] 2026-03-14 15:52:25,494 | INFO     | PID=528207 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 08:52:34] 2026-03-14 15:52:25,494 | INFO     | .. there are 28 such processes running
[2026-03-14 08:52:34] 2026-03-14 15:52:25,507 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 08:52:34] 2026-03-14 15:52:25,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 08:52:34] 2026-03-14 15:52:25,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 08:52:34] 2026-03-14 15:52:28,156 | INFO     | [monitor] cgroup control has ended
[2026-03-14 08:52:34] 2026-03-14 15:52:28,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866908149568)>', '<ExcThread(monitor, started 139866499159808)>']
[2026-03-14 08:52:34] 2026-03-14 15:52:28,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 08:52:34] 2026-03-14 15:52:28,525 | INFO     | [monitor] control thread has ended
[2026-03-14 08:52:34] 2026-03-14 15:52:33,419 | INFO     | all workflow threads have been joined
[2026-03-14 08:52:34] 2026-03-14 15:52:33,419 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 08:52:34] 2026-03-14 15:52:33,419 | INFO     | traces error code: 0
[2026-03-14 08:52:34] 2026-03-14 15:52:33,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 08:52:34] 2026-03-14 15:52:33,905 [wrapper] ==== pilot stdout END ====
[2026-03-14 08:52:34] 2026-03-14 15:52:33,920 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 08:52:34] 2026-03-14 15:52:33,925 [wrapper] pilotpid: 528207
[2026-03-14 08:52:34] 2026-03-14 15:52:33,945 [wrapper] Pilot exit status: 0
[2026-03-14 08:52:34] 2026-03-14 15:52:34,060 [wrapper] pandaids: 7046546930
[2026-03-14 08:52:34] 2026-03-14 15:52:34,126 [wrapper] cleanup supervisor_pilot  528213 528208
[2026-03-14 08:52:34] 2026-03-14 15:52:34,130 [wrapper] Test setup, not cleaning
[2026-03-14 08:52:34] 2026-03-14 15:52:34,132 [wrapper] apfmon messages muted
[2026-03-14 08:52:34] 2026-03-14 15:52:34,134 [wrapper] ==== wrapper stdout END ====
[2026-03-14 08:52:34] 2026-03-14 15:52:34,135 [wrapper] ==== wrapper stderr END ====
[2026-03-14 08:52:34]  *** Error codes and diagnostics ***
[2026-03-14 08:52:34]     "exeErrorCode": 65,
[2026-03-14 08:52:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 08:52:34]     "pilotErrorCode": 1305,
[2026-03-14 08:52:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-14 08:52:34]  *** Listing of results directory ***
[2026-03-14 08:52:34] total 435808
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc    585013 Mar 14 02:56 pilot3.tar.gz
[2026-03-14 08:52:34] -rwx------. 1 boinc boinc     36322 Mar 14 03:00 runpilot2-wrapper.sh
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc      5111 Mar 14 03:01 queuedata.json
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc       100 Mar 14 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 08:52:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 08:47 run_atlas
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc       105 Mar 14 08:47 job.xml
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc      6594 Mar 14 08:47 init_data.xml
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc 442119676 Mar 14 08:47 EVNT.46701403._001855.pool.root.1
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc     15845 Mar 14 08:47 start_atlas.sh
[2026-03-14 08:52:34] drwxrwx--x. 2 boinc boinc      4096 Mar 14 08:47 shared
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc    597526 Mar 14 08:47 input.tar.gz
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc         0 Mar 14 08:47 boinc_lockfile
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc      2564 Mar 14 08:47 pandaJob.out
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc   1004579 Mar 14 08:48 agis_schedconf.cvmfs.json
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc   1511579 Mar 14 08:48 agis_ddmendpoints.agis.ALL.json
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc       444 Mar 14 08:48 workernode_map.json
[2026-03-14 08:52:34] drwx------. 5 boinc boinc      4096 Mar 14 08:48 pilot3
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc       523 Mar 14 08:49 boinc_task_state.xml
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc       964 Mar 14 08:49 memory_monitor_summary.json
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc     21618 Mar 14 08:49 log.48955010._041762.job.log.tgz.1
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc      7039 Mar 14 08:51 heartbeat.json
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc        95 Mar 14 08:52 pilot_heartbeat.json
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc      8192 Mar 14 08:52 boinc_mmap_file
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc        22 Mar 14 08:52 wrapper_checkpoint.txt
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc      4818 Mar 14 08:52 pilotlog.txt
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc     86310 Mar 14 08:52 log.48955010._041762.job.log.1
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc       188 Mar 14 08:52 output.list
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc       620 Mar 14 08:52 runtime_log
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc    122880 Mar 14 08:52 result.tar.gz
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc       644 Mar 14 08:52 VO6LDm7xaL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm29pLDmuqVHin.diag
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc      8635 Mar 14 08:52 runtime_log.err
[2026-03-14 08:52:34] -rw-r--r--. 1 boinc boinc     21780 Mar 14 08:52 stderr.txt
[2026-03-14 08:52:34] No HITS result produced
[2026-03-14 08:52:34]  *** Contents of shared directory: ***
[2026-03-14 08:52:34] total 432484
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc 442119676 Mar 14 08:47 ATLAS.root_0
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc     15845 Mar 14 08:47 start_atlas.sh
[2026-03-14 08:52:34] -rw-r--r--. 2 boinc boinc    597526 Mar 14 08:47 input.tar.gz
[2026-03-14 08:52:34] -rw-------. 1 boinc boinc    122880 Mar 14 08:52 result.tar.gz
08:52:36 (524457): run_atlas exited; CPU time 21.026841
08:52:36 (524457): called boinc_finish(0)

</stderr_txt>
]]>

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