Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:52:22 (8919): wrapper (7.7.26015): starting
09:52:22 (8919): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 09:52:22] Arguments: --nthreads 8
[2026-03-14 09:52:22] Threads: 8
[2026-03-14 09:52:22] Checking for CVMFS
[2026-03-14 09:52:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 09:52:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 09:52:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 09:52:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 09:52:23] 2.11.2.0 2990 64861 78256 157279 1 50 12426558 20275201 1 130560 0 19321592 99.950 3395154 22873 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 09:52:23] CVMFS is ok
[2026-03-14 09:52:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 09:52:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 09:52:23] Further information can be found at the LHC@home message board.
[2026-03-14 09:52:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:52:23] Checking for apptainer binary...
[2026-03-14 09:52:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 09:52:23] Running /usr/bin/apptainer --version
[2026-03-14 09:52:23] apptainer version 1.3.2-1.el7
[2026-03-14 09:52:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:52:24] c-204-25.aglt2.org
[2026-03-14 09:52:24] apptainer works
[2026-03-14 09:52:24] Set ATHENA_PROC_NUMBER=8
[2026-03-14 09:52:24] Set ATHENA_CORE_NUMBER=8
[2026-03-14 09:52:24] Starting ATLAS job with PandaID=7046340008
[2026-03-14 09:52:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 11:46:22]  *** The last 200 lines of the pilot log: ***
[2026-03-14 11:46:22] 2026-03-14 15:45:49,549 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 11:46:22] 2026-03-14 15:45:49,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 11:46:22] 2026-03-14 15:45:49,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 11:46:22] 2026-03-14 15:45:49,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 11:46:22] 2026-03-14 15:45:49,553 | INFO     | fitting pss+swap vs Time
[2026-03-14 11:46:22] 2026-03-14 15:45:49,553 | INFO     | sum of square deviations: 424045160.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,554 | INFO     | sum of deviations: 3572151764.999996
[2026-03-14 11:46:22] 2026-03-14 15:45:49,554 | INFO     | mean x: 1773499749.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,554 | INFO     | mean y: 2503482.5675675673
[2026-03-14 11:46:22] 2026-03-14 15:45:49,554 | INFO     | intersect: -14937438901.440308
[2026-03-14 11:46:22] 2026-03-14 15:45:49,554 | INFO     | chi2: 1.5121451180913714
[2026-03-14 11:46:22] 2026-03-14 15:45:49,555 | INFO     | sum of square deviations: 369281342.5
[2026-03-14 11:46:22] 2026-03-14 15:45:49,555 | INFO     | sum of deviations: 3581255191.500001
[2026-03-14 11:46:22] 2026-03-14 15:45:49,555 | INFO     | mean x: 1773499596.5
[2026-03-14 11:46:22] 2026-03-14 15:45:49,555 | INFO     | mean y: 2503507.9716981133
[2026-03-14 11:46:22] 2026-03-14 15:45:49,555 | INFO     | intersect: -17196726201.524883
[2026-03-14 11:46:22] 2026-03-14 15:45:49,556 | INFO     | chi2: 1.5144694062927102
[2026-03-14 11:46:22] 2026-03-14 15:45:49,556 | INFO     | current chi2=1.5144694062927102 (change=-0.15370801211675383 %)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,556 | INFO     | right removable region: 105
[2026-03-14 11:46:22] 2026-03-14 15:45:49,556 | INFO     | sum of square deviations: 369281342.5
[2026-03-14 11:46:22] 2026-03-14 15:45:49,557 | INFO     | sum of deviations: -12113553179.000002
[2026-03-14 11:46:22] 2026-03-14 15:45:49,557 | INFO     | mean x: 1773499901.5
[2026-03-14 11:46:22] 2026-03-14 15:45:49,557 | INFO     | mean y: 2546210.5849056602
[2026-03-14 11:46:22] 2026-03-14 15:45:49,557 | INFO     | intersect: 58178746568.63986
[2026-03-14 11:46:22] 2026-03-14 15:45:49,558 | INFO     | chi2: 0.1043209902496877
[2026-03-14 11:46:22] 2026-03-14 15:45:49,558 | INFO     | current chi2=0.1043209902496877 (change=93.10112574503685 %)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,558 | INFO     | sum of square deviations: 319447850.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,558 | INFO     | sum of deviations: -10194175796.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,558 | INFO     | mean x: 1773500054.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,559 | INFO     | mean y: 2540208.9306930695
[2026-03-14 11:46:22] 2026-03-14 15:45:49,559 | INFO     | intersect: 56598229692.17966
[2026-03-14 11:46:22] 2026-03-14 15:45:49,559 | INFO     | chi2: 0.0933173874047805
[2026-03-14 11:46:22] 2026-03-14 15:45:49,559 | INFO     | current chi2=0.0933173874047805 (change=10.547832050453664 %)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,559 | INFO     | left removable region: 20
[2026-03-14 11:46:22] 2026-03-14 15:45:49,560 | INFO     | sum of square deviations: 190403570.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,560 | INFO     | sum of deviations: -3028490912.0000005
[2026-03-14 11:46:22] 2026-03-14 15:45:49,560 | INFO     | mean x: 1773500176.0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,560 | INFO     | mean y: 2516205.011764706
[2026-03-14 11:46:22] 2026-03-14 15:45:49,560 | INFO     | intersect: 28211174085.98743
[2026-03-14 11:46:22] 2026-03-14 15:45:49,561 | INFO     | chi2: 0.05149156392758215
[2026-03-14 11:46:22] 2026-03-14 15:45:49,561 | INFO     | current memory leak: -15.91 B/s (using 85 data points, chi2=0.05)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,561 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,561 | INFO     | ..............................
[2026-03-14 11:46:22] 2026-03-14 15:45:49,561 | INFO     | . Timing measurements:
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . get job = 0 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . initial setup = 8 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . payload setup = 8 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . stage-in = 0 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . payload execution = 6754 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . stage-out = 0 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,562 | INFO     | . log creation = 0 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,563 | INFO     | ..............................
[2026-03-14 11:46:22] 2026-03-14 15:45:49,648 | INFO     | 
[2026-03-14 11:46:22] 2026-03-14 15:45:49,648 | INFO     | job summary report
[2026-03-14 11:46:22] 2026-03-14 15:45:49,648 | INFO     | --------------------------------------------------
[2026-03-14 11:46:22] 2026-03-14 15:45:49,648 | INFO     | PanDA job id: 7046340008
[2026-03-14 11:46:22] 2026-03-14 15:45:49,649 | INFO     | task id: 48955010
[2026-03-14 11:46:22] 2026-03-14 15:45:49,649 | INFO     | errors: (none)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 11:46:22] 2026-03-14 15:45:49,649 | INFO     | pilot state: finished 
[2026-03-14 11:46:22] 2026-03-14 15:45:49,649 | INFO     | transexitcode: 0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | exeerrorcode: 0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | exeerrordiag: 
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | exitcode: 0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | exitmsg: OK
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | cpuconsumptiontime: 49878 s
[2026-03-14 11:46:22] 2026-03-14 15:45:49,650 | INFO     | nevents: 400
[2026-03-14 11:46:22] 2026-03-14 15:45:49,651 | INFO     | neventsw: 0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,651 | INFO     | pid: 17122
[2026-03-14 11:46:22] 2026-03-14 15:45:49,651 | INFO     | pgrp: 17122
[2026-03-14 11:46:22] 2026-03-14 15:45:49,651 | INFO     | corecount: 8
[2026-03-14 11:46:22] 2026-03-14 15:45:49,651 | INFO     | event service: False
[2026-03-14 11:46:22] 2026-03-14 15:45:49,652 | INFO     | sizes: {0: 2279693, 1: 2280210, 12: 2280210, 6766: 2307338, 6767: 2316336, 6770: 2316714}
[2026-03-14 11:46:22] 2026-03-14 15:45:49,652 | INFO     | --------------------------------------------------
[2026-03-14 11:46:22] 2026-03-14 15:45:49,652 | INFO     | 
[2026-03-14 11:46:22] 2026-03-14 15:45:49,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 11:46:22] 2026-03-14 15:45:49,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,682 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,685 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,686 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 11:46:22] 2026-03-14 15:45:49,686 | INFO     | job 7046340008 has completed (purged errors)
[2026-03-14 11:46:22] 2026-03-14 15:45:49,686 | INFO     | overall cleanup function is called
[2026-03-14 11:46:22] 2026-03-14 15:45:50,695 | INFO     | --- collectZombieJob: --- 10, [17122]
[2026-03-14 11:46:22] 2026-03-14 15:45:50,695 | INFO     | zombie collector waiting for pid 17122
[2026-03-14 11:46:22] 2026-03-14 15:45:50,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 11:46:22] 2026-03-14 15:45:50,695 | INFO     | collected zombie processes
[2026-03-14 11:46:22] 2026-03-14 15:45:50,696 | INFO     | will attempt to kill all subprocesses of pid=17122
[2026-03-14 11:46:22] 2026-03-14 15:45:50,789 | INFO     | process IDs to be killed: [17122] (in reverse order)
[2026-03-14 11:46:22] 2026-03-14 15:45:50,848 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 11:46:22] 2026-03-14 15:45:50,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 11:46:22] 2026-03-14 15:45:50,854 | INFO     | did not find any defunct processes belonging to 17122
[2026-03-14 11:46:22] 2026-03-14 15:45:50,857 | INFO     | did not find any defunct processes belonging to 17122
[2026-03-14 11:46:22] 2026-03-14 15:45:50,857 | INFO     | ready for new job
[2026-03-14 11:46:22] 2026-03-14 15:45:50,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 11:46:22] 2026-03-14 15:45:50,859 | INFO     | **************************************
[2026-03-14 11:46:22] 2026-03-14 15:45:50,859 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 11:46:22] 2026-03-14 15:45:50,859 | INFO     | **************************************
[2026-03-14 11:46:22] 2026-03-14 15:45:50,860 | INFO     | 
[2026-03-14 11:46:22] 2026-03-14 15:45:50,860 | INFO     | architecture information:
[2026-03-14 11:46:22] 2026-03-14 15:45:50,861 | INFO     | executing command: cat /etc/os-release
[2026-03-14 11:46:22] 2026-03-14 15:45:50,879 | INFO     | cat /etc/os-release:
[2026-03-14 11:46:22] NAME="CentOS Linux"
[2026-03-14 11:46:22] VERSION="7 (Core)"
[2026-03-14 11:46:22] ID="centos"
[2026-03-14 11:46:22] ID_LIKE="rhel fedora"
[2026-03-14 11:46:22] VERSION_ID="7"
[2026-03-14 11:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 11:46:22] ANSI_COLOR="0;31"
[2026-03-14 11:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 11:46:22] HOME_URL="https://www.centos.org/"
[2026-03-14 11:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 11:46:22] 
[2026-03-14 11:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 11:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 11:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 11:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 11:46:22] 
[2026-03-14 11:46:22] 2026-03-14 15:45:50,880 | INFO     | **************************************
[2026-03-14 11:46:22] 2026-03-14 15:45:51,383 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 11:46:22] 2026-03-14 15:45:51,404 | INFO     | sufficient remaining disk space (18109956096 B)
[2026-03-14 11:46:22] 2026-03-14 15:45:51,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 11:46:22] 2026-03-14 15:45:51,405 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 11:46:22] 2026-03-14 15:45:51,405 | INFO     | update_server=False
[2026-03-14 11:46:22] 2026-03-14 15:45:51,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 11:46:22] 2026-03-14 15:45:51,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 11:46:22] 2026-03-14 15:45:51,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:46:22] 2026-03-14 15:45:51,552 | INFO     | job.realtimelogging is not enabled
[2026-03-14 11:46:22] 2026-03-14 15:45:51,792 | INFO     | all payload control threads have been joined
[2026-03-14 11:46:22] 2026-03-14 15:45:52,120 | INFO     | all data control threads have been joined
[2026-03-14 11:46:22] 2026-03-14 15:45:52,411 | INFO     | [job] retrieve thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:52,412 | INFO     | [job] queue monitor thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:52,500 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:52,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 11:46:22] 2026-03-14 15:45:52,532 | INFO     | all job control threads have been joined
[2026-03-14 11:46:22] 2026-03-14 15:45:52,557 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:52,706 | WARNING  | process 17122 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 11:46:22] 2026-03-14 15:45:52,780 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 11:46:22] 2026-03-14 15:45:52,782 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 11:46:22] 2026-03-14 15:45:52,783 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 11:46:22] 2026-03-14 15:45:52,783 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 11:46:22] 2026-03-14 15:45:52,783 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7046340008/payload.stdout) since it has not been created yet
[2026-03-14 11:46:22] 2026-03-14 15:45:52,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 11:46:22] 2026-03-14 15:45:52,799 | INFO     | [payload] control thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:52,802 | INFO     | sufficient remaining disk space (18109956096 B)
[2026-03-14 11:46:22] 2026-03-14 15:45:52,802 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 11:46:22] 2026-03-14 15:45:52,802 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7046340008/HITS.48955010._039849.pool.root.1 since it does not exist
[2026-03-14 11:46:22] 2026-03-14 15:45:52,892 | INFO     | number of running child processes to parent process 17122: 1
[2026-03-14 11:46:22] 2026-03-14 15:45:52,892 | INFO     | maximum number of monitored processes: 6
[2026-03-14 11:46:22] 2026-03-14 15:45:52,892 | INFO     | aborting job monitoring since job object (job id=7046340008) has expired
[2026-03-14 11:46:22] 2026-03-14 15:45:52,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 11:46:22] 2026-03-14 15:45:52,892 | INFO     | will abort loop
[2026-03-14 11:46:22] 2026-03-14 15:45:52,970 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,070 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,071 | INFO     | [data] copytool_in thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,125 | INFO     | [data] control thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,411 | INFO     | [payload] validate_post thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,537 | INFO     | [job] control thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,608 | INFO     | [job] validate thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,735 | INFO     | [payload] failed_post thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:53,898 | INFO     | [job] job monitor thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:54,516 | INFO     | [data] copytool_out thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:55,412 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 11:46:22] 2026-03-14 15:45:58,680 | INFO     | [monitor] cgroup control has ended
[2026-03-14 11:46:22] 2026-03-14 15:46:00,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455984850752)>', '<ExcThread(monitor, started 140454809032448)>']
[2026-03-14 11:46:22] 2026-03-14 15:46:05,095 | INFO     | all workflow threads have been joined
[2026-03-14 11:46:22] 2026-03-14 15:46:05,096 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 11:46:22] 2026-03-14 15:46:05,096 | INFO     | traces error code: 0
[2026-03-14 11:46:22] 2026-03-14 15:46:05,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 11:46:22] 2026-03-14 15:46:22,388 | INFO     | PID=12666 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 11:46:22] 2026-03-14 15:46:22,389 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 11:46:22] 2026-03-14 15:46:22,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 11:46:22] 2026-03-14 15:46:22,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 11:46:22] 2026-03-14 15:46:22,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 11:46:22] 2026-03-14 15:46:22,389 | INFO     | [monitor] control thread has ended
[2026-03-14 11:46:22] 2026-03-14 15:46:22,505 [wrapper] ==== pilot stdout END ====
[2026-03-14 11:46:22] 2026-03-14 15:46:22,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 11:46:22] 2026-03-14 15:46:22,514 [wrapper] pilotpid: 12666
[2026-03-14 11:46:22] 2026-03-14 15:46:22,518 [wrapper] Pilot exit status: 0
[2026-03-14 11:46:22] 2026-03-14 15:46:22,535 [wrapper] pandaids: 7046340008
[2026-03-14 11:46:22] 2026-03-14 15:46:22,580 [wrapper] cleanup supervisor_pilot 25081 12667
[2026-03-14 11:46:22] 2026-03-14 15:46:22,585 [wrapper] Test setup, not cleaning
[2026-03-14 11:46:22] 2026-03-14 15:46:22,589 [wrapper] apfmon messages muted
[2026-03-14 11:46:22] 2026-03-14 15:46:22,594 [wrapper] ==== wrapper stdout END ====
[2026-03-14 11:46:22] 2026-03-14 15:46:22,598 [wrapper] ==== wrapper stderr END ====
[2026-03-14 11:46:22]  *** Error codes and diagnostics ***
[2026-03-14 11:46:22]     "exeErrorCode": 0,
[2026-03-14 11:46:22]     "exeErrorDiag": "",
[2026-03-14 11:46:22]     "pilotErrorCode": 0,
[2026-03-14 11:46:22]     "pilotErrorDiag": "",
[2026-03-14 11:46:22]  *** Listing of results directory ***
[2026-03-14 11:46:22] total 604148
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 05:39 pilot3.tar.gz
[2026-03-14 11:46:22] -rwx------ 1 boincer umatlas     36322 Mar 14 05:43 runpilot2-wrapper.sh
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 05:47 queuedata.json
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas       100 Mar 14 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 11:46:22] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 09:52 run_atlas
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas       105 Mar 14 09:52 job.xml
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas 436947685 Mar 14 09:52 EVNT.46701403._001816.pool.root.1
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 09:52 start_atlas.sh
[2026-03-14 11:46:22] drwxrwx--x 2 boincer umatlas      4096 Mar 14 09:52 shared
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas    597539 Mar 14 09:52 input.tar.gz
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas         0 Mar 14 09:52 boinc_lockfile
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas      2565 Mar 14 09:52 pandaJob.out
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas        57 Mar 14 09:52 setup.sh.local
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas   1004579 Mar 14 09:52 agis_schedconf.cvmfs.json
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas   1511579 Mar 14 09:52 agis_ddmendpoints.agis.ALL.json
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas       432 Mar 14 09:52 workernode_map.json
[2026-03-14 11:46:22] drwx------ 5 boincer umatlas      4096 Mar 14 09:52 pilot3
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas      5910 Mar 14 11:38 init_data.xml
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas 175058070 Mar 14 11:45 HITS.48955010._039849.pool.root.1
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas       530 Mar 14 11:45 boinc_task_state.xml
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas      1047 Mar 14 11:45 memory_monitor_summary.json
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas    395861 Mar 14 11:45 log.48955010._039849.job.log.tgz.1
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas      6407 Mar 14 11:45 heartbeat.json
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 11:46 boinc_mmap_file
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas        27 Mar 14 11:46 wrapper_checkpoint.txt
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas        95 Mar 14 11:46 pilot_heartbeat.json
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas       745 Mar 14 11:46 pilotlog.txt
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas    961848 Mar 14 11:46 log.48955010._039849.job.log.1
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas       357 Mar 14 11:46 output.list
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas       620 Mar 14 11:46 runtime_log
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas   1372160 Mar 14 11:46 result.tar.gz
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas      9341 Mar 14 11:46 runtime_log.err
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas       658 Mar 14 11:46 7kzKDmmhaL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7asLDmzKiOzn.diag
[2026-03-14 11:46:22] -rw-r--r-- 1 boincer umatlas     21413 Mar 14 11:46 stderr.txt
[2026-03-14 11:46:22] HITS file was successfully produced:
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas 175058070 Mar 14 11:45 shared/HITS.pool.root.1
[2026-03-14 11:46:22]  *** Contents of shared directory: ***
[2026-03-14 11:46:22] total 599608
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas 436947685 Mar 14 09:52 ATLAS.root_0
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 09:52 start_atlas.sh
[2026-03-14 11:46:22] -rw-r--r-- 2 boincer umatlas    597539 Mar 14 09:52 input.tar.gz
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas 175058070 Mar 14 11:45 HITS.pool.root.1
[2026-03-14 11:46:22] -rw------- 1 boincer umatlas   1372160 Mar 14 11:46 result.tar.gz
11:46:24 (8919): run_atlas exited; CPU time 49849.802331
11:46:24 (8919): called boinc_finish(0)

</stderr_txt>
]]>

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