Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:39 (654907): wrapper (7.7.26015): starting
05:40:39 (654907): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 05:40:39] Arguments: --nthreads 4
[2026-03-15 05:40:39] Threads: 4
[2026-03-15 05:40:39] Checking for CVMFS
[2026-03-15 05:40:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 05:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 05:40:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 05:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 05:40:42] 2.13.3.0 5621 6723 51168 157286 2 188 3723482 6144001 2215 130560 0 11605197 99.995 238749 71 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-03-15 05:40:42] CVMFS is ok
[2026-03-15 05:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 05:40:42] Checking for apptainer binary...
[2026-03-15 05:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-15 05:40:42] Running /usr/bin/apptainer --version
[2026-03-15 05:40:42] apptainer version 1.4.0
[2026-03-15 05:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 05:40:42] Zen
[2026-03-15 05:40:42] apptainer works
[2026-03-15 05:40:42] Set ATHENA_PROC_NUMBER=4
[2026-03-15 05:40:42] Set ATHENA_CORE_NUMBER=4
[2026-03-15 05:40:42] Starting ATLAS job with PandaID=7045605433
[2026-03-15 05:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:55:15]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:55:15]  surl=/home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/log.48955010._037677.job.log.tgz.1
[2026-03-15 06:55:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/e8/log.48955010._037677.job.log.tgz.1
[2026-03-15 06:55:15]  workdir=None
[2026-03-15 06:55:15] ]
[2026-03-15 06:55:15] 2026-03-14 19:54:17,145 | INFO     | transferring file log.48955010._037677.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/log.48955010._037677.job.log.tgz.1 to /home/mich
[2026-03-15 06:55:15] 2026-03-14 19:54:17,145 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/log.48955010._037677.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/2/lo
[2026-03-15 06:55:15] 2026-03-14 19:54:17,158 | INFO     | adding to output.list: log.48955010._037677.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/e8/log.48955010._037677.job.log.tg
[2026-03-15 06:55:15] 2026-03-14 19:54:17,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 06:55:15] 2026-03-14 19:54:17,159 | INFO     | summary of transferred files:
[2026-03-15 06:55:15] 2026-03-14 19:54:17,159 | INFO     |  -- lfn=log.48955010._037677.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 06:55:15] 2026-03-14 19:54:17,159 | INFO     | stage-out finished correctly
[2026-03-15 06:55:15] 2026-03-14 19:54:18,171 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 06:55:15] 2026-03-14 19:54:18,607 | INFO     | time since job start (4397s) is within the limit (345600.0s)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,097 | WARNING  | process 663643 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 06:55:15] 2026-03-14 19:54:20,097 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2037602 B
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15381 B
[2026-03-15 06:55:15] 2026-03-14 19:54:20,098 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/2
[2026-03-15 06:55:15] 2026-03-14 19:54:20,112 | INFO     | sufficient remaining disk space (197196251136 B)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,112 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,113 | INFO     | size of work directory /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433: 2334837 B (within 5033164800 B limit)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,113 | INFO     | pfn file=/home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/HITS.48955010._037677.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,113 | INFO     | total size of present files: 0 B (workdir size: 2334837 B)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,113 | INFO     | output file size check: skipping output file /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/HITS.48955010._037677.pool.root.1 since it does not exist
[2026-03-15 06:55:15] 2026-03-14 19:54:20,204 | INFO     | number of running child processes to parent process 663643: 1
[2026-03-15 06:55:15] 2026-03-14 19:54:20,204 | INFO     | maximum number of monitored processes: 6
[2026-03-15 06:55:15] 2026-03-14 19:54:20,609 | INFO     | time since job start (4399s) is within the limit (345600.0s)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,863 | INFO     | job 7045605433 has state=finished
[2026-03-15 06:55:15] 2026-03-14 19:54:20,863 | INFO     | preparing for final server update for job 7045605433 in state='finished'
[2026-03-15 06:55:15] 2026-03-14 19:54:20,863 | INFO     | reading metadata from: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/jobReport.json
[2026-03-15 06:55:15] 2026-03-14 19:54:20,864 | INFO     | added worker_node to metadata from /home/michael/Boinc/BOINC/slots/2/workernode_map.json
[2026-03-15 06:55:15] 2026-03-14 19:54:20,864 | INFO     | this job has now completed (state=finished)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,864 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,864 | INFO     | log transfer has been attempted: DONE
[2026-03-15 06:55:15] 2026-03-14 19:54:20,864 | INFO     | job 7045605433 has finished - writing final server update
[2026-03-15 06:55:15] 2026-03-14 19:54:20,865 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,866 | INFO     | using path: /home/michael/Boinc/BOINC/slots/2/PanDA_Pilot-7045605433/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | INFO     | extracted standard info from prmon json
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:55:15] 2026-03-14 19:54:20,867 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | sum of square deviations: 85136480.0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | sum of deviations: -3583827836.0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | mean x: 1773515935.0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | mean y: 2372140.769230769
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | intersect: 74658686043.37086
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | chi2: 0.008809494146936634
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | current memory leak: -42.10 B/s (using 65 data points, chi2=0.01)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | could have reported an average CPU frequency of 4259 MHz (6 samples)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | ..............................
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . Timing measurements:
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . get job = 0 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . initial setup = 9 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . payload setup = 3 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . stage-in = 0 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . payload execution = 4376 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . stage-out = 0 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | . log creation = 0 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,868 | INFO     | ..............................
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | 
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | job summary report
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | --------------------------------------------------
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | PanDA job id: 7045605433
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | task id: 48955010
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | errors: (none)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | pilot state: finished 
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | transexitcode: 0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | exeerrorcode: 0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | exeerrordiag: 
[2026-03-15 06:55:15] 2026-03-14 19:54:20,900 | INFO     | exitcode: 0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | exitmsg: OK
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | cpuconsumptiontime: 16464 s
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | nevents: 400
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | neventsw: 0
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | pid: 663643
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | pgrp: 663643
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | corecount: 4
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | event service: False
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | sizes: {0: 2280190, 11: 2280190, 4383: 2306386, 4384: 2315406, 4385: 2315462, 4388: 2315684}
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | --------------------------------------------------
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | 
[2026-03-15 06:55:15] 2026-03-14 19:54:20,901 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/2
[2026-03-15 06:55:15] 2026-03-14 19:54:20,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,918 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:55:15] 2026-03-14 19:54:20,919 | INFO     | job 7045605433 has completed (purged errors)
[2026-03-15 06:55:15] 2026-03-14 19:54:20,919 | INFO     | overall cleanup function is called
[2026-03-15 06:55:15] 2026-03-14 19:54:21,925 | INFO     | --- collectZombieJob: --- 10, [663643]
[2026-03-15 06:55:15] 2026-03-14 19:54:21,925 | INFO     | zombie collector waiting for pid 663643
[2026-03-15 06:55:15] 2026-03-14 19:54:21,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:55:15] 2026-03-14 19:54:21,925 | INFO     | collected zombie processes
[2026-03-15 06:55:15] 2026-03-14 19:54:21,925 | INFO     | will attempt to kill all subprocesses of pid=663643
[2026-03-15 06:55:15] 2026-03-14 19:54:22,019 | INFO     | process IDs to be killed: [663643] (in reverse order)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,069 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:55:15] 2026-03-14 19:54:22,072 | INFO     | did not find any defunct processes belonging to 663643
[2026-03-15 06:55:15] 2026-03-14 19:54:22,074 | INFO     | did not find any defunct processes belonging to 663643
[2026-03-15 06:55:15] 2026-03-14 19:54:22,074 | INFO     | ready for new job
[2026-03-15 06:55:15] 2026-03-14 19:54:22,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:55:15] 2026-03-14 19:54:22,075 | INFO     | **************************************
[2026-03-15 06:55:15] 2026-03-14 19:54:22,075 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:55:15] 2026-03-14 19:54:22,075 | INFO     | **************************************
[2026-03-15 06:55:15] 2026-03-14 19:54:22,075 | INFO     | 
[2026-03-15 06:55:15] 2026-03-14 19:54:22,076 | INFO     | architecture information:
[2026-03-15 06:55:15] 2026-03-14 19:54:22,076 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:55:15] 2026-03-14 19:54:22,087 | INFO     | cat /etc/os-release:
[2026-03-15 06:55:15] NAME="CentOS Linux"
[2026-03-15 06:55:15] VERSION="7 (Core)"
[2026-03-15 06:55:15] ID="centos"
[2026-03-15 06:55:15] ID_LIKE="rhel fedora"
[2026-03-15 06:55:15] VERSION_ID="7"
[2026-03-15 06:55:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:55:15] ANSI_COLOR="0;31"
[2026-03-15 06:55:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:55:15] HOME_URL="https://www.centos.org/"
[2026-03-15 06:55:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:55:15] 
[2026-03-15 06:55:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:55:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:55:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:55:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:55:15] 
[2026-03-15 06:55:15] 2026-03-14 19:54:22,087 | INFO     | **************************************
[2026-03-15 06:55:15] 2026-03-14 19:54:22,590 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/2
[2026-03-15 06:55:15] 2026-03-14 19:54:22,604 | INFO     | sufficient remaining disk space (197199396864 B)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:55:15] 2026-03-14 19:54:22,604 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | INFO     | update_server=False
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:55:15] 2026-03-14 19:54:22,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:55:15] 2026-03-14 19:54:22,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:55:15] 2026-03-14 19:54:22,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 06:55:15] 2026-03-14 19:54:22,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 06:55:15] 2026-03-14 19:54:22,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:55:15] 2026-03-14 19:54:22,707 | INFO     | will abort loop
[2026-03-15 06:55:15] 2026-03-14 19:54:22,842 | INFO     | all data control threads have been joined
[2026-03-15 06:55:15] 2026-03-14 19:54:23,410 | INFO     | all job control threads have been joined
[2026-03-15 06:55:15] 2026-03-14 19:54:23,610 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:23,610 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:23,712 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:23,847 | INFO     | [data] control thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:23,886 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:23,910 | INFO     | all payload control threads have been joined
[2026-03-15 06:55:15] 2026-03-14 19:54:24,205 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:55:15] 2026-03-14 19:54:24,415 | INFO     | [job] control thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,423 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,436 | INFO     | [job] validate thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,550 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,564 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,701 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,705 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,763 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,913 | INFO     | [payload] control thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:24,939 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:54:28,210 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:55:15] 2026-03-14 19:55:07,826 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:55:15] 2026-03-14 19:55:09,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136707907798848)>', '<ExcThread(monitor, started 136707550713600)>']
[2026-03-15 06:55:15] 2026-03-14 19:55:09,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:55:15] 2026-03-14 19:55:09,817 | INFO     | [monitor] control thread has ended
[2026-03-15 06:55:15] 2026-03-14 19:55:14,838 | INFO     | all workflow threads have been joined
[2026-03-15 06:55:15] 2026-03-14 19:55:14,838 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:55:15] 2026-03-14 19:55:14,838 | INFO     | traces error code: 0
[2026-03-15 06:55:15] 2026-03-14 19:55:14,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:55:15] 2026-03-14 19:55:14,919 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:55:15] 2026-03-14 19:55:14,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:55:15] 2026-03-14 19:55:14,924 [wrapper] pilotpid: 659125
[2026-03-15 06:55:15] 2026-03-14 19:55:14,926 [wrapper] Pilot exit status: 0
[2026-03-15 06:55:15] 2026-03-14 19:55:14,933 [wrapper] pandaids: 7045605433
[2026-03-15 06:55:15] 2026-03-14 19:55:14,968 [wrapper] cleanup supervisor_pilot  711638 659126
[2026-03-15 06:55:15] 2026-03-14 19:55:14,970 [wrapper] Test setup, not cleaning
[2026-03-15 06:55:15] 2026-03-14 19:55:14,972 [wrapper] apfmon messages muted
[2026-03-15 06:55:15] 2026-03-14 19:55:14,975 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:55:15] 2026-03-14 19:55:14,977 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:55:15]  *** Error codes and diagnostics ***
[2026-03-15 06:55:15]     "exeErrorCode": 0,
[2026-03-15 06:55:15]     "exeErrorDiag": "",
[2026-03-15 06:55:15]     "pilotErrorCode": 0,
[2026-03-15 06:55:15]     "pilotErrorDiag": "",
[2026-03-15 06:55:15]  *** Listing of results directory ***
[2026-03-15 06:55:15] total 624372
[2026-03-15 06:55:15] -rw-r--r-- 1 michael michael    585013 Mar 14 12:49 pilot3.tar.gz
[2026-03-15 06:55:15] -rwx------ 1 michael michael     36322 Mar 14 12:52 runpilot2-wrapper.sh
[2026-03-15 06:55:15] -rw-r--r-- 1 michael michael      5111 Mar 14 12:56 queuedata.json
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael       100 Mar 15 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:55:15] -rwxr-xr-x 1 michael michael      7986 Mar 15 05:40 run_atlas
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael       105 Mar 15 05:40 job.xml
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael 443351626 Mar 15 05:40 EVNT.46701403._001776.pool.root.1
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael      9816 Mar 15 05:40 init_data.xml
[2026-03-15 06:55:15] drwxrwx--x 2 michael michael      4096 Mar 15 05:40 shared
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael    597534 Mar 15 05:40 input.tar.gz
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael     15845 Mar 15 05:40 start_atlas.sh
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael         0 Mar 15 05:40 boinc_lockfile
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael      2563 Mar 15 05:40 pandaJob.out
[2026-03-15 06:55:15] -rw------- 1 michael michael        50 Mar 15 05:40 setup.sh.local
[2026-03-15 06:55:15] -rw------- 1 michael michael   1005889 Mar 15 05:40 agis_schedconf.cvmfs.json
[2026-03-15 06:55:15] -rw------- 1 michael michael   1511579 Mar 15 05:40 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:55:15] -rw------- 1 michael michael       417 Mar 15 05:41 workernode_map.json
[2026-03-15 06:55:15] drwx------ 5 michael michael      4096 Mar 15 05:41 pilot3
[2026-03-15 06:55:15] -rw------- 1 michael michael        95 Mar 15 06:53 pilot_heartbeat.json
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael       530 Mar 15 06:53 boinc_task_state.xml
[2026-03-15 06:55:15] -rw------- 1 michael michael 190225716 Mar 15 06:53 HITS.48955010._037677.pool.root.1
[2026-03-15 06:55:15] -rw------- 1 michael michael      1023 Mar 15 06:54 memory_monitor_summary.json
[2026-03-15 06:55:15] -rw------- 1 michael michael    250352 Mar 15 06:54 log.48955010._037677.job.log.tgz.1
[2026-03-15 06:55:15] -rw------- 1 michael michael      6273 Mar 15 06:54 heartbeat.json
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael      8192 Mar 15 06:54 boinc_mmap_file
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael        27 Mar 15 06:54 wrapper_checkpoint.txt
[2026-03-15 06:55:15] -rw------- 1 michael michael      4746 Mar 15 06:55 pilotlog.txt
[2026-03-15 06:55:15] -rw------- 1 michael michael    665982 Mar 15 06:55 log.48955010._037677.job.log.1
[2026-03-15 06:55:15] -rw------- 1 michael michael       357 Mar 15 06:55 output.list
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael       620 Mar 15 06:55 runtime_log
[2026-03-15 06:55:15] -rw------- 1 michael michael    931840 Mar 15 06:55 result.tar.gz
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael      9444 Mar 15 06:55 runtime_log.err
[2026-03-15 06:55:15] -rw------- 1 michael michael       638 Mar 15 06:55 i5VLDm1LTL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhkrLDmTyzMcm.diag
[2026-03-15 06:55:15] -rw-rw-r-- 1 michael michael     22322 Mar 15 06:55 stderr.txt
[2026-03-15 06:55:15] HITS file was successfully produced:
[2026-03-15 06:55:15] -rw------- 1 michael michael 190225716 Mar 15 06:53 shared/HITS.pool.root.1
[2026-03-15 06:55:15]  *** Contents of shared directory: ***
[2026-03-15 06:55:15] total 620252
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael 443351626 Mar 15 05:40 ATLAS.root_0
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael    597534 Mar 15 05:40 input.tar.gz
[2026-03-15 06:55:15] -rw-r--r-- 2 michael michael     15845 Mar 15 05:40 start_atlas.sh
[2026-03-15 06:55:15] -rw------- 1 michael michael 190225716 Mar 15 06:53 HITS.pool.root.1
[2026-03-15 06:55:15] -rw------- 1 michael michael    931840 Mar 15 06:55 result.tar.gz
06:55:16 (654907): run_atlas exited; CPU time 16514.457670
06:55:16 (654907): called boinc_finish(0)

</stderr_txt>
]]>

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