Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:06 (7974): wrapper (7.7.26015): starting
18:00:06 (7974): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 18:00:06] Arguments: --nthreads 8
[2026-03-14 18:00:06] Threads: 8
[2026-03-14 18:00:06] Checking for CVMFS
[2026-03-14 18:00:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:00:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:00:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:00:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:00:10] 2.11.2.0 24263 127847 135052 157284 1 53 24517720 25165825 4784 130560 158 40632107 99.827 30558587 1064 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 18:00:10] CVMFS is ok
[2026-03-14 18:00:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:00:10] Checking for apptainer binary...
[2026-03-14 18:00:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:00:10] Running /usr/bin/apptainer --version
[2026-03-14 18:00:10] apptainer version 1.3.2-1.el7
[2026-03-14 18:00:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:00:23] cg-vwn484.simple-grid.lan
[2026-03-14 18:00:23] apptainer works
[2026-03-14 18:00:23] Set ATHENA_PROC_NUMBER=8
[2026-03-14 18:00:23] Set ATHENA_CORE_NUMBER=8
[2026-03-14 18:00:23] Starting ATLAS job with PandaID=7045652984
[2026-03-14 18:00:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 21:34:16]  *** The last 200 lines of the pilot log: ***
[2026-03-14 21:34:16] 2026-03-14 20:33:32,055 | INFO     | total number of processed events: 400 (read)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,056 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7045652984/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,057 | INFO     | extracted standard info from prmon json
[2026-03-14 21:34:16] 2026-03-14 20:33:32,057 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 21:34:16] 2026-03-14 20:33:32,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 21:34:16] 2026-03-14 20:33:32,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 21:34:16] 2026-03-14 20:33:32,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 21:34:16] 2026-03-14 20:33:32,062 | INFO     | fitting pss+swap vs Time
[2026-03-14 21:34:16] 2026-03-14 20:33:32,063 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,064 | INFO     | sum of deviations: 58955224124.000015
[2026-03-14 21:34:16] 2026-03-14 20:33:32,064 | INFO     | mean x: 1773514280.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,064 | INFO     | mean y: 2445340.8258706466
[2026-03-14 21:34:16] 2026-03-14 20:33:32,065 | INFO     | intersect: -41521741632.00321
[2026-03-14 21:34:16] 2026-03-14 20:33:32,065 | INFO     | chi2: 7.28941499021677
[2026-03-14 21:34:16] 2026-03-14 20:33:32,065 | INFO     | sum of square deviations: 2334722845.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,067 | INFO     | sum of deviations: 70919511279.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,067 | INFO     | mean x: 1773514127.5
[2026-03-14 21:34:16] 2026-03-14 20:33:32,067 | INFO     | mean y: 2455073.724489796
[2026-03-14 21:34:16] 2026-03-14 20:33:32,067 | INFO     | intersect: -53869787380.26242
[2026-03-14 21:34:16] 2026-03-14 20:33:32,068 | INFO     | chi2: 6.596710059391465
[2026-03-14 21:34:16] 2026-03-14 20:33:32,068 | INFO     | current chi2=6.596710059391465 (change=9.502887841548247 %)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,068 | INFO     | right removable region: 195
[2026-03-14 21:34:16] 2026-03-14 20:33:32,068 | INFO     | sum of square deviations: 2334722845.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,070 | INFO     | sum of deviations: -9509307140.999996
[2026-03-14 21:34:16] 2026-03-14 20:33:32,070 | INFO     | mean x: 1773514432.5
[2026-03-14 21:34:16] 2026-03-14 20:33:32,070 | INFO     | mean y: 2502241.8061224488
[2026-03-14 21:34:16] 2026-03-14 20:33:32,070 | INFO     | intersect: 7226012087.420712
[2026-03-14 21:34:16] 2026-03-14 20:33:32,071 | INFO     | chi2: 2.4871677651131483
[2026-03-14 21:34:16] 2026-03-14 20:33:32,071 | INFO     | current chi2=2.4871677651131483 (change=65.87973426603901 %)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,071 | INFO     | sum of square deviations: 2160561440.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,072 | INFO     | sum of deviations: -45618653824.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,073 | INFO     | mean x: 1773514585.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,073 | INFO     | mean y: 2533634.717277487
[2026-03-14 21:34:16] 2026-03-14 20:33:32,073 | INFO     | intersect: 37448979918.11018
[2026-03-14 21:34:16] 2026-03-14 20:33:32,073 | INFO     | chi2: 0.9170692756554284
[2026-03-14 21:34:16] 2026-03-14 20:33:32,073 | INFO     | current chi2=0.9170692756554284 (change=63.12796874746773 %)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,074 | INFO     | sum of square deviations: 1995283922.5
[2026-03-14 21:34:16] 2026-03-14 20:33:32,075 | INFO     | sum of deviations: -48478927293.00001
[2026-03-14 21:34:16] 2026-03-14 20:33:32,075 | INFO     | mean x: 1773514737.5
[2026-03-14 21:34:16] 2026-03-14 20:33:32,075 | INFO     | mean y: 2536225.3333333335
[2026-03-14 21:34:16] 2026-03-14 20:33:32,075 | INFO     | intersect: 43093191666.790436
[2026-03-14 21:34:16] 2026-03-14 20:33:32,076 | INFO     | chi2: 0.8732733816610052
[2026-03-14 21:34:16] 2026-03-14 20:33:32,076 | INFO     | current chi2=0.8732733816610052 (change=4.775636383971354 %)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,076 | INFO     | left removable region: 30
[2026-03-14 21:34:16] 2026-03-14 20:33:32,076 | INFO     | sum of square deviations: 1392881930.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,077 | INFO     | sum of deviations: -25282533115.999996
[2026-03-14 21:34:16] 2026-03-14 20:33:32,078 | INFO     | mean x: 1773515012.0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,078 | INFO     | mean y: 2539207.963636364
[2026-03-14 21:34:16] 2026-03-14 20:33:32,078 | INFO     | intersect: 32194034450.215164
[2026-03-14 21:34:16] 2026-03-14 20:33:32,078 | INFO     | chi2: 0.0820418818227382
[2026-03-14 21:34:16] 2026-03-14 20:33:32,078 | INFO     | current memory leak: -18.15 B/s (using 165 data points, chi2=0.08)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | ..............................
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | . Timing measurements:
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | . get job = 0 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | . initial setup = 98 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | . payload setup = 119 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,079 | INFO     | . stage-in = 0 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,080 | INFO     | . payload execution = 12325 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,080 | INFO     | . stage-out = 4 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,080 | INFO     | . log creation = 1 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,080 | INFO     | ..............................
[2026-03-14 21:34:16] 2026-03-14 20:33:32,190 | INFO     | 
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | job summary report
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | --------------------------------------------------
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | PanDA job id: 7045652984
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | task id: 48955010
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | errors: (none)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | pilot state: finished 
[2026-03-14 21:34:16] 2026-03-14 20:33:32,191 | INFO     | transexitcode: 0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | exeerrorcode: 0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | exeerrordiag: 
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | exitcode: 0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | exitmsg: OK
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | cpuconsumptiontime: 47016 s
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | nevents: 400
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | neventsw: 0
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | pid: 16580
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | pgrp: 16580
[2026-03-14 21:34:16] 2026-03-14 20:33:32,192 | INFO     | corecount: 8
[2026-03-14 21:34:16] 2026-03-14 20:33:32,193 | INFO     | event service: False
[2026-03-14 21:34:16] 2026-03-14 20:33:32,193 | INFO     | sizes: {0: 2279091, 1: 2279777, 2: 2280238, 13: 2280238, 12448: 2310057, 12453: 2319057, 12454: 2319241, 12456: 2319435}
[2026-03-14 21:34:16] 2026-03-14 20:33:32,193 | INFO     | --------------------------------------------------
[2026-03-14 21:34:16] 2026-03-14 20:33:32,193 | INFO     | 
[2026-03-14 21:34:16] 2026-03-14 20:33:32,193 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-14 21:34:16] 2026-03-14 20:33:32,252 | INFO     | time since job start (12469s) is within the limit (345600.0s)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,719 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,719 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 21:34:16] 2026-03-14 20:33:32,719 | INFO     | job 7045652984 has completed (purged errors)
[2026-03-14 21:34:16] 2026-03-14 20:33:32,719 | INFO     | overall cleanup function is called
[2026-03-14 21:34:16] 2026-03-14 20:33:33,727 | INFO     | --- collectZombieJob: --- 10, [16580]
[2026-03-14 21:34:16] 2026-03-14 20:33:33,728 | INFO     | zombie collector waiting for pid 16580
[2026-03-14 21:34:16] 2026-03-14 20:33:33,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 21:34:16] 2026-03-14 20:33:33,728 | INFO     | collected zombie processes
[2026-03-14 21:34:16] 2026-03-14 20:33:33,728 | INFO     | will attempt to kill all subprocesses of pid=16580
[2026-03-14 21:34:16] 2026-03-14 20:33:33,846 | INFO     | process IDs to be killed: [16580] (in reverse order)
[2026-03-14 21:34:16] 2026-03-14 20:33:34,617 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 21:34:16] 2026-03-14 20:33:34,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 21:34:16] 2026-03-14 20:33:34,620 | INFO     | did not find any defunct processes belonging to 16580
[2026-03-14 21:34:16] 2026-03-14 20:33:34,623 | INFO     | did not find any defunct processes belonging to 16580
[2026-03-14 21:34:16] 2026-03-14 20:33:34,623 | INFO     | ready for new job
[2026-03-14 21:34:16] 2026-03-14 20:33:34,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 21:34:16] 2026-03-14 20:33:34,626 | INFO     | **************************************
[2026-03-14 21:34:16] 2026-03-14 20:33:34,626 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 21:34:16] 2026-03-14 20:33:34,626 | INFO     | **************************************
[2026-03-14 21:34:16] 2026-03-14 20:33:34,626 | INFO     | 
[2026-03-14 21:34:16] 2026-03-14 20:33:34,627 | INFO     | pilot is running in a VM
[2026-03-14 21:34:16] 2026-03-14 20:33:34,627 | INFO     | architecture information:
[2026-03-14 21:34:16] 2026-03-14 20:33:34,627 | INFO     | executing command: cat /etc/os-release
[2026-03-14 21:34:16] 2026-03-14 20:33:34,830 | INFO     | cat /etc/os-release:
[2026-03-14 21:34:16] NAME="CentOS Linux"
[2026-03-14 21:34:16] VERSION="7 (Core)"
[2026-03-14 21:34:16] ID="centos"
[2026-03-14 21:34:16] ID_LIKE="rhel fedora"
[2026-03-14 21:34:16] VERSION_ID="7"
[2026-03-14 21:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 21:34:16] ANSI_COLOR="0;31"
[2026-03-14 21:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 21:34:16] HOME_URL="https://www.centos.org/"
[2026-03-14 21:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 21:34:16] 
[2026-03-14 21:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 21:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 21:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 21:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 21:34:16] 
[2026-03-14 21:34:16] 2026-03-14 20:33:34,830 | INFO     | **************************************
[2026-03-14 21:34:16] 2026-03-14 20:33:35,334 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-14 21:34:16] 2026-03-14 20:33:35,561 | INFO     | sufficient remaining disk space (495002320896 B)
[2026-03-14 21:34:16] 2026-03-14 20:33:35,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 21:34:16] 2026-03-14 20:33:35,561 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 21:34:16] 2026-03-14 20:33:35,562 | INFO     | update_server=False
[2026-03-14 21:34:16] 2026-03-14 20:33:35,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 21:34:16] 2026-03-14 20:33:35,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:34:16] 2026-03-14 20:33:35,566 | INFO     | aborting loop
[2026-03-14 21:34:16] 2026-03-14 20:33:35,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 21:34:16] 2026-03-14 20:33:36,076 | INFO     | all data control threads have been joined
[2026-03-14 21:34:16] 2026-03-14 20:33:36,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 21:34:16] 2026-03-14 20:33:36,240 | INFO     | all payload control threads have been joined
[2026-03-14 21:34:16] 2026-03-14 20:33:36,568 | INFO     | [job] retrieve thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:36,572 | INFO     | [job] job monitor thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:36,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:36,899 | INFO     | [job] validate thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,004 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,082 | INFO     | [data] control thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,105 | INFO     | all job control threads have been joined
[2026-03-14 21:34:16] 2026-03-14 20:33:37,127 | INFO     | [payload] validate_post thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 21:34:16] 2026-03-14 20:33:37,246 | INFO     | [payload] control thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,364 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,579 | INFO     | [data] copytool_out thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,626 | INFO     | [payload] failed_post thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,720 | INFO     | [data] copytool_in thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:37,842 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:38,111 | INFO     | [job] control thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:38,212 | INFO     | [job] queue monitor thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:33:40,108 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 21:34:16] 2026-03-14 20:34:04,438 | INFO     | [monitor] cgroup control has ended
[2026-03-14 21:34:16] 2026-03-14 20:34:05,410 | INFO     | PID=12098 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 21:34:16] 2026-03-14 20:34:05,411 | INFO     | .. there are 9 such processes running
[2026-03-14 21:34:16] 2026-03-14 20:34:05,412 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 21:34:16] 2026-03-14 20:34:05,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 21:34:16] 2026-03-14 20:34:05,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 21:34:16] 2026-03-14 20:34:06,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433457985344)>', '<ExcThread(monitor, started 140432881219328)>']
[2026-03-14 21:34:16] 2026-03-14 20:34:06,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 21:34:16] 2026-03-14 20:34:06,418 | INFO     | [monitor] control thread has ended
[2026-03-14 21:34:16] 2026-03-14 20:34:07,495 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-03-14 21:34:16] 2026-03-14 20:34:11,132 | INFO     | all workflow threads have been joined
[2026-03-14 21:34:16] 2026-03-14 20:34:11,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 21:34:16] 2026-03-14 20:34:11,133 | INFO     | traces error code: 0
[2026-03-14 21:34:16] 2026-03-14 20:34:11,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 21:34:16] 2026-03-14 20:34:11,526 [wrapper] ==== pilot stdout END ====
[2026-03-14 21:34:16] 2026-03-14 20:34:11,581 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 21:34:16] 2026-03-14 20:34:11,645 [wrapper] pilotpid: 12098
[2026-03-14 21:34:16] 2026-03-14 20:34:11,739 [wrapper] Pilot exit status: 0
[2026-03-14 21:34:16] 2026-03-14 20:34:12,133 [wrapper] pandaids: 7045652984
[2026-03-14 21:34:16] 2026-03-14 20:34:13,115 [wrapper] cleanup supervisor_pilot 24400 12099
[2026-03-14 21:34:16] 2026-03-14 20:34:13,182 [wrapper] Test setup, not cleaning
[2026-03-14 21:34:16] 2026-03-14 20:34:13,271 [wrapper] apfmon messages muted
[2026-03-14 21:34:16] 2026-03-14 20:34:13,375 [wrapper] ==== wrapper stdout END ====
[2026-03-14 21:34:16] 2026-03-14 20:34:13,426 [wrapper] ==== wrapper stderr END ====
[2026-03-14 21:34:16]  *** Error codes and diagnostics ***
[2026-03-14 21:34:16]     "exeErrorCode": 0,
[2026-03-14 21:34:16]     "exeErrorDiag": "",
[2026-03-14 21:34:16]     "pilotErrorCode": 0,
[2026-03-14 21:34:16]     "pilotErrorDiag": "",
[2026-03-14 21:34:16]  *** Listing of results directory ***
[2026-03-14 21:34:16] total 610024
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc    585013 Mar 14 04:09 pilot3.tar.gz
[2026-03-14 21:34:16] -rwx------. 1 boinc boinc     36322 Mar 14 04:10 runpilot2-wrapper.sh
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc      5111 Mar 14 04:10 queuedata.json
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 21:34:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:00 run_atlas
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:00 job.xml
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc      6393 Mar 14 18:00 init_data.xml
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc 436435132 Mar 14 18:00 EVNT.46701403._001786.pool.root.1
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:00 start_atlas.sh
[2026-03-14 21:34:16] drwxrwx--x. 2 boinc boinc        68 Mar 14 18:00 shared
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc    597525 Mar 14 18:00 input.tar.gz
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:00 boinc_lockfile
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc      2564 Mar 14 18:00 pandaJob.out
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc       415 Mar 14 18:05 workernode_map.json
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc   1004579 Mar 14 18:05 agis_schedconf.cvmfs.json
[2026-03-14 21:34:16] drwx------. 5 boinc boinc      4096 Mar 14 18:05 pilot3
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc 179873117 Mar 14 21:32 HITS.48955010._038234.pool.root.1
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc       531 Mar 14 21:32 boinc_task_state.xml
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc      1031 Mar 14 21:33 memory_monitor_summary.json
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc   1511579 Mar 14 21:33 agis_ddmendpoints.agis.ALL.json
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc    468524 Mar 14 21:33 log.48955010._038234.job.log.tgz.1
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc      6330 Mar 14 21:33 heartbeat.json
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc      8192 Mar 14 21:33 boinc_mmap_file
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc        28 Mar 14 21:33 wrapper_checkpoint.txt
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc        95 Mar 14 21:34 pilot_heartbeat.json
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc      4881 Mar 14 21:34 pilotlog.txt
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc   1749600 Mar 14 21:34 log.48955010._038234.job.log.1
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc       357 Mar 14 21:34 output.list
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc       620 Mar 14 21:34 runtime_log
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc   2232320 Mar 14 21:34 result.tar.gz
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc      8832 Mar 14 21:34 runtime_log.err
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc       655 Mar 14 21:34 NzGKDmbZUL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNrrLDmP2UfNn.diag
[2026-03-14 21:34:16] -rw-r--r--. 1 boinc boinc     20718 Mar 14 21:34 stderr.txt
[2026-03-14 21:34:16] HITS file was successfully produced:
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc 179873117 Mar 14 21:32 shared/HITS.pool.root.1
[2026-03-14 21:34:16]  *** Contents of shared directory: ***
[2026-03-14 21:34:16] total 604648
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc 436435132 Mar 14 18:00 ATLAS.root_0
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:00 start_atlas.sh
[2026-03-14 21:34:16] -rw-r--r--. 2 boinc boinc    597525 Mar 14 18:00 input.tar.gz
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc 179873117 Mar 14 21:32 HITS.pool.root.1
[2026-03-14 21:34:16] -rw-------. 1 boinc boinc   2232320 Mar 14 21:34 result.tar.gz
21:34:18 (7974): run_atlas exited; CPU time 47193.998960
21:34:18 (7974): called boinc_finish(0)

</stderr_txt>
]]>

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