Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:39 (5639): wrapper (7.7.26015): starting
05:14:39 (5639): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 05:14:39] Arguments: --nthreads 8
[2026-03-14 05:14:39] Threads: 8
[2026-03-14 05:14:39] Checking for CVMFS
[2026-03-14 05:14:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 05:14:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 05:14:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 05:14:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 05:14:40] 2.11.2.0 2888 204191 112864 157272 3 1 15713935 20275201 1 130560 0 51430646 99.840 14251308 28533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 05:14:40] CVMFS is ok
[2026-03-14 05:14:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 05:14:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 05:14:40] Further information can be found at the LHC@home message board.
[2026-03-14 05:14:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 05:14:40] Checking for apptainer binary...
[2026-03-14 05:14:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 05:14:40] Running /usr/bin/apptainer --version
[2026-03-14 05:14:40] apptainer version 1.3.2-1.el7
[2026-03-14 05:14:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 05:14:42] c-204-6.aglt2.org
[2026-03-14 05:14:42] apptainer works
[2026-03-14 05:14:42] Set ATHENA_PROC_NUMBER=8
[2026-03-14 05:14:42] Set ATHENA_CORE_NUMBER=8
[2026-03-14 05:14:42] Starting ATLAS job with PandaID=7045457971
[2026-03-14 05:14:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 07:08:41]  *** The last 200 lines of the pilot log: ***
[2026-03-14 07:08:41] 2026-03-14 11:08:09,061 | INFO     | mean x: 1773483089.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,062 | INFO     | mean y: 2615601.7837837837
[2026-03-14 07:08:41] 2026-03-14 11:08:09,062 | INFO     | intersect: 6151593605.758311
[2026-03-14 07:08:41] 2026-03-14 11:08:09,062 | INFO     | chi2: 1.6576541650270566
[2026-03-14 07:08:41] 2026-03-14 11:08:09,062 | INFO     | sum of square deviations: 369281342.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,063 | INFO     | sum of deviations: 270253759.4999998
[2026-03-14 07:08:41] 2026-03-14 11:08:09,063 | INFO     | mean x: 1773482936.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,063 | INFO     | mean y: 2620450.386792453
[2026-03-14 07:08:41] 2026-03-14 11:08:09,064 | INFO     | intersect: -1295280027.7512941
[2026-03-14 07:08:41] 2026-03-14 11:08:09,064 | INFO     | chi2: 1.6588234149961083
[2026-03-14 07:08:41] 2026-03-14 11:08:09,064 | INFO     | current chi2=1.6588234149961083 (change=-0.07053642392486438 %)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,064 | INFO     | right removable region: 105
[2026-03-14 07:08:41] 2026-03-14 11:08:09,064 | INFO     | sum of square deviations: 369281342.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,065 | INFO     | sum of deviations: -19240433919.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,065 | INFO     | mean x: 1773483241.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,065 | INFO     | mean y: 2664136.2358490564
[2026-03-14 07:08:41] 2026-03-14 11:08:09,065 | INFO     | intersect: 92405347912.28232
[2026-03-14 07:08:41] 2026-03-14 11:08:09,066 | INFO     | chi2: 0.13713328221874554
[2026-03-14 07:08:41] 2026-03-14 11:08:09,066 | INFO     | current chi2=0.13713328221874554 (change=91.72726826186286 %)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,066 | INFO     | sum of square deviations: 319447850.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | sum of deviations: -20262538604.000004
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | mean x: 1773483394.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | mean y: 2667099.415841584
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | intersect: 112494504920.44969
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | chi2: 0.08486473154867281
[2026-03-14 07:08:41] 2026-03-14 11:08:09,067 | INFO     | current chi2=0.08486473154867281 (change=38.11514595464692 %)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,068 | INFO     | sum of square deviations: 274312120.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,068 | INFO     | sum of deviations: -18908733670.499992
[2026-03-14 07:08:41] 2026-03-14 11:08:09,068 | INFO     | mean x: 1773483546.5
[2026-03-14 07:08:41] 2026-03-14 11:08:09,068 | INFO     | mean y: 2662511.0520833335
[2026-03-14 07:08:41] 2026-03-14 11:08:09,068 | INFO     | intersect: 122251464531.8388
[2026-03-14 07:08:41] 2026-03-14 11:08:09,069 | INFO     | chi2: 0.07692460548295492
[2026-03-14 07:08:41] 2026-03-14 11:08:09,069 | INFO     | current chi2=0.07692460548295492 (change=9.3562142020846 %)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,069 | INFO     | left removable region: 30
[2026-03-14 07:08:41] 2026-03-14 11:08:09,069 | INFO     | sum of square deviations: 130793150.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,069 | INFO     | sum of deviations: -11971394569.999998
[2026-03-14 07:08:41] 2026-03-14 11:08:09,070 | INFO     | mean x: 1773483821.0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,070 | INFO     | mean y: 2651405.2133333334
[2026-03-14 07:08:41] 2026-03-14 11:08:09,070 | INFO     | intersect: 162328236381.9667
[2026-03-14 07:08:41] 2026-03-14 11:08:09,070 | INFO     | chi2: 0.058407400552406286
[2026-03-14 07:08:41] 2026-03-14 11:08:09,070 | INFO     | current memory leak: -91.53 B/s (using 75 data points, chi2=0.06)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | could have reported an average CPU frequency of 1712 MHz (7 samples)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | ..............................
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . Timing measurements:
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . get job = 0 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . initial setup = 8 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . payload setup = 8 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . stage-in = 0 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,071 | INFO     | . payload execution = 6756 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,072 | INFO     | . stage-out = 0 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,072 | INFO     | . log creation = 0 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,072 | INFO     | ..............................
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | 
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | job summary report
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | --------------------------------------------------
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | PanDA job id: 7045457971
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | task id: 48955010
[2026-03-14 07:08:41] 2026-03-14 11:08:09,158 | INFO     | errors: (none)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | pilot state: finished 
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | transexitcode: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | exeerrorcode: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | exeerrordiag: 
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | exitcode: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | exitmsg: OK
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | cpuconsumptiontime: 50214 s
[2026-03-14 07:08:41] 2026-03-14 11:08:09,159 | INFO     | nevents: 400
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | neventsw: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | pid: 14249
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | pgrp: 14249
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | corecount: 8
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | event service: False
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | sizes: {0: 2279975, 1: 2280209, 11: 2280209, 6768: 2307373, 6769: 2307372, 6770: 2316748}
[2026-03-14 07:08:41] 2026-03-14 11:08:09,160 | INFO     | --------------------------------------------------
[2026-03-14 07:08:41] 2026-03-14 11:08:09,161 | INFO     | 
[2026-03-14 07:08:41] 2026-03-14 11:08:09,161 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 07:08:41] 2026-03-14 11:08:09,189 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,190 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,190 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,193 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,194 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 07:08:41] 2026-03-14 11:08:09,194 | INFO     | job 7045457971 has completed (purged errors)
[2026-03-14 07:08:41] 2026-03-14 11:08:09,194 | INFO     | overall cleanup function is called
[2026-03-14 07:08:41] 2026-03-14 11:08:10,204 | INFO     | --- collectZombieJob: --- 10, [14249]
[2026-03-14 07:08:41] 2026-03-14 11:08:10,204 | INFO     | zombie collector waiting for pid 14249
[2026-03-14 07:08:41] 2026-03-14 11:08:10,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 07:08:41] 2026-03-14 11:08:10,204 | INFO     | collected zombie processes
[2026-03-14 07:08:41] 2026-03-14 11:08:10,205 | INFO     | will attempt to kill all subprocesses of pid=14249
[2026-03-14 07:08:41] 2026-03-14 11:08:10,298 | INFO     | process IDs to be killed: [14249] (in reverse order)
[2026-03-14 07:08:41] 2026-03-14 11:08:10,358 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 07:08:41] 2026-03-14 11:08:10,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 07:08:41] 2026-03-14 11:08:10,365 | INFO     | did not find any defunct processes belonging to 14249
[2026-03-14 07:08:41] 2026-03-14 11:08:10,369 | INFO     | did not find any defunct processes belonging to 14249
[2026-03-14 07:08:41] 2026-03-14 11:08:10,370 | INFO     | ready for new job
[2026-03-14 07:08:41] 2026-03-14 11:08:10,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 07:08:41] 2026-03-14 11:08:10,372 | INFO     | **************************************
[2026-03-14 07:08:41] 2026-03-14 11:08:10,372 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 07:08:41] 2026-03-14 11:08:10,372 | INFO     | **************************************
[2026-03-14 07:08:41] 2026-03-14 11:08:10,372 | INFO     | 
[2026-03-14 07:08:41] 2026-03-14 11:08:10,373 | INFO     | architecture information:
[2026-03-14 07:08:41] 2026-03-14 11:08:10,373 | INFO     | executing command: cat /etc/os-release
[2026-03-14 07:08:41] 2026-03-14 11:08:10,393 | INFO     | cat /etc/os-release:
[2026-03-14 07:08:41] NAME="CentOS Linux"
[2026-03-14 07:08:41] VERSION="7 (Core)"
[2026-03-14 07:08:41] ID="centos"
[2026-03-14 07:08:41] ID_LIKE="rhel fedora"
[2026-03-14 07:08:41] VERSION_ID="7"
[2026-03-14 07:08:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 07:08:41] ANSI_COLOR="0;31"
[2026-03-14 07:08:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 07:08:41] HOME_URL="https://www.centos.org/"
[2026-03-14 07:08:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 07:08:41] 
[2026-03-14 07:08:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 07:08:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 07:08:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 07:08:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 07:08:41] 
[2026-03-14 07:08:41] 2026-03-14 11:08:10,394 | INFO     | **************************************
[2026-03-14 07:08:41] 2026-03-14 11:08:10,896 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 07:08:41] 2026-03-14 11:08:10,918 | INFO     | sufficient remaining disk space (18141413376 B)
[2026-03-14 07:08:41] 2026-03-14 11:08:10,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 07:08:41] 2026-03-14 11:08:10,919 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 07:08:41] 2026-03-14 11:08:10,919 | INFO     | update_server=False
[2026-03-14 07:08:41] 2026-03-14 11:08:10,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 07:08:41] 2026-03-14 11:08:10,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:08:41] 2026-03-14 11:08:10,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 07:08:41] 2026-03-14 11:08:11,011 | INFO     | all payload control threads have been joined
[2026-03-14 07:08:41] 2026-03-14 11:08:11,447 | INFO     | all job control threads have been joined
[2026-03-14 07:08:41] 2026-03-14 11:08:11,549 | INFO     | all data control threads have been joined
[2026-03-14 07:08:41] 2026-03-14 11:08:11,601 | INFO     | job.realtimelogging is not enabled
[2026-03-14 07:08:41] 2026-03-14 11:08:11,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 07:08:41] 2026-03-14 11:08:11,770 | WARNING  | process 14249 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 07:08:41] 2026-03-14 11:08:11,842 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 07:08:41] 2026-03-14 11:08:11,844 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 07:08:41] 2026-03-14 11:08:11,844 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 07:08:41] 2026-03-14 11:08:11,844 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 07:08:41] 2026-03-14 11:08:11,845 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7045457971/payload.stdout) since it has not been created yet
[2026-03-14 07:08:41] 2026-03-14 11:08:11,845 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 07:08:41] 2026-03-14 11:08:11,864 | INFO     | sufficient remaining disk space (18141413376 B)
[2026-03-14 07:08:41] 2026-03-14 11:08:11,865 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 07:08:41] 2026-03-14 11:08:11,865 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7045457971/HITS.48955010._036992.pool.root.1 since it does not exist
[2026-03-14 07:08:41] 2026-03-14 11:08:11,920 | INFO     | [job] retrieve thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:11,922 | INFO     | [job] queue monitor thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:11,960 | INFO     | number of running child processes to parent process 14249: 1
[2026-03-14 07:08:41] 2026-03-14 11:08:11,960 | INFO     | maximum number of monitored processes: 6
[2026-03-14 07:08:41] 2026-03-14 11:08:11,960 | INFO     | aborting job monitoring since job object (job id=7045457971) has expired
[2026-03-14 07:08:41] 2026-03-14 11:08:11,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:08:41] 2026-03-14 11:08:11,960 | INFO     | will abort loop
[2026-03-14 07:08:41] 2026-03-14 11:08:12,013 | INFO     | [payload] control thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,339 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,344 | INFO     | [data] copytool_in thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,346 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,452 | INFO     | [job] control thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,554 | INFO     | [data] control thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,824 | INFO     | [payload] failed_post thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,886 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:12,966 | INFO     | [job] job monitor thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:13,240 | INFO     | [job] validate thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:13,413 | INFO     | [payload] validate_post thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:13,630 | INFO     | [data] copytool_out thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:14,927 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 07:08:41] 2026-03-14 11:08:17,995 | INFO     | [monitor] cgroup control has ended
[2026-03-14 07:08:41] 2026-03-14 11:08:18,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736969217856)>', '<ExcThread(monitor, started 139736005990144)>']
[2026-03-14 07:08:41] 2026-03-14 11:08:23,561 | INFO     | all workflow threads have been joined
[2026-03-14 07:08:41] 2026-03-14 11:08:23,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 07:08:41] 2026-03-14 11:08:23,561 | INFO     | traces error code: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:23,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 07:08:41] 2026-03-14 11:08:40,822 | INFO     | PID=9707 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 07:08:41] 2026-03-14 11:08:40,823 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 07:08:41] 2026-03-14 11:08:40,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 07:08:41] 2026-03-14 11:08:40,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 07:08:41] 2026-03-14 11:08:40,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 07:08:41] 2026-03-14 11:08:40,823 | INFO     | [monitor] control thread has ended
[2026-03-14 07:08:41] 2026-03-14 11:08:40,937 [wrapper] ==== pilot stdout END ====
[2026-03-14 07:08:41] 2026-03-14 11:08:40,941 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 07:08:41] 2026-03-14 11:08:40,946 [wrapper] pilotpid: 9707
[2026-03-14 07:08:41] 2026-03-14 11:08:40,950 [wrapper] Pilot exit status: 0
[2026-03-14 07:08:41] 2026-03-14 11:08:40,968 [wrapper] pandaids: 7045457971
[2026-03-14 07:08:41] 2026-03-14 11:08:41,013 [wrapper] cleanup supervisor_pilot 20659 9708
[2026-03-14 07:08:41] 2026-03-14 11:08:41,017 [wrapper] Test setup, not cleaning
[2026-03-14 07:08:41] 2026-03-14 11:08:41,021 [wrapper] apfmon messages muted
[2026-03-14 07:08:41] 2026-03-14 11:08:41,026 [wrapper] ==== wrapper stdout END ====
[2026-03-14 07:08:41] 2026-03-14 11:08:41,030 [wrapper] ==== wrapper stderr END ====
[2026-03-14 07:08:41]  *** Error codes and diagnostics ***
[2026-03-14 07:08:41]     "exeErrorCode": 0,
[2026-03-14 07:08:41]     "exeErrorDiag": "",
[2026-03-14 07:08:41]     "pilotErrorCode": 0,
[2026-03-14 07:08:41]     "pilotErrorDiag": "",
[2026-03-14 07:08:41]  *** Listing of results directory ***
[2026-03-14 07:08:41] total 607232
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 21:49 pilot3.tar.gz
[2026-03-14 07:08:41] -rwx------ 1 boincer umatlas     36322 Mar 13 21:52 runpilot2-wrapper.sh
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 21:55 queuedata.json
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas       100 Mar 14 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 07:08:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 05:14 run_atlas
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas       105 Mar 14 05:14 job.xml
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas 435974143 Mar 14 05:14 EVNT.46701403._001734.pool.root.1
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas    597520 Mar 14 05:14 input.tar.gz
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 05:14 start_atlas.sh
[2026-03-14 07:08:41] drwxrwx--x 2 boincer umatlas      4096 Mar 14 05:14 shared
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas         0 Mar 14 05:14 boinc_lockfile
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas      2564 Mar 14 05:14 pandaJob.out
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas        57 Mar 14 05:14 setup.sh.local
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas   1004579 Mar 14 05:14 agis_schedconf.cvmfs.json
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas   1511579 Mar 14 05:15 agis_ddmendpoints.agis.ALL.json
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas       432 Mar 14 05:15 workernode_map.json
[2026-03-14 07:08:41] drwx------ 5 boincer umatlas      4096 Mar 14 05:15 pilot3
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas      5909 Mar 14 07:04 init_data.xml
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas 179192982 Mar 14 07:07 HITS.48955010._036992.pool.root.1
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas       530 Mar 14 07:07 boinc_task_state.xml
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas      1062 Mar 14 07:08 memory_monitor_summary.json
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas    388524 Mar 14 07:08 log.48955010._036992.job.log.tgz.1
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas      6411 Mar 14 07:08 heartbeat.json
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 07:08 boinc_mmap_file
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas        27 Mar 14 07:08 wrapper_checkpoint.txt
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas        95 Mar 14 07:08 pilot_heartbeat.json
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas       744 Mar 14 07:08 pilotlog.txt
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas    961898 Mar 14 07:08 log.48955010._036992.job.log.1
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas       357 Mar 14 07:08 output.list
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas       620 Mar 14 07:08 runtime_log
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas   1372160 Mar 14 07:08 result.tar.gz
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas       657 Mar 14 07:08 YtILDmuLTL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmU0oLDm0yqGhn.diag
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas      9336 Mar 14 07:08 runtime_log.err
[2026-03-14 07:08:41] -rw-r--r-- 1 boincer umatlas     21381 Mar 14 07:08 stderr.txt
[2026-03-14 07:08:41] HITS file was successfully produced:
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas 179192982 Mar 14 07:07 shared/HITS.pool.root.1
[2026-03-14 07:08:41]  *** Contents of shared directory: ***
[2026-03-14 07:08:41] total 602700
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas 435974143 Mar 14 05:14 ATLAS.root_0
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas    597520 Mar 14 05:14 input.tar.gz
[2026-03-14 07:08:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 05:14 start_atlas.sh
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas 179192982 Mar 14 07:07 HITS.pool.root.1
[2026-03-14 07:08:41] -rw------- 1 boincer umatlas   1372160 Mar 14 07:08 result.tar.gz
07:08:42 (5639): run_atlas exited; CPU time 50164.390709
07:08:42 (5639): called boinc_finish(0)

</stderr_txt>
]]>

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