Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:46:00 (2851): wrapper (7.7.26015): starting
13:46:00 (2851): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 13:46:00] Arguments: --nthreads 8
[2026-03-14 13:46:00] Threads: 8
[2026-03-14 13:46:00] Checking for CVMFS
[2026-03-14 13:46:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:46:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:46:01] 2.11.0.0 4044 221693 98640 157278 2 188 2608278 4096001 1586 130560 5 10202166 99.486 11615931 358 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-14 13:46:01] CVMFS is ok
[2026-03-14 13:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:46:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:46:01] Further information can be found at the LHC@home message board.
[2026-03-14 13:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:46:01] Checking for apptainer binary...
[2026-03-14 13:46:01] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-14 13:46:01] apptainer is not installed, using version from CVMFS
[2026-03-14 13:46:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:46:01] WARNING: Environment variable TMPDIR already has value [/tmp/job_11308339/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node217
[2026-03-14 13:46:01] apptainer works
[2026-03-14 13:46:01] Set ATHENA_PROC_NUMBER=8
[2026-03-14 13:46:01] Set ATHENA_CORE_NUMBER=8
[2026-03-14 13:46:01] Starting ATLAS job with PandaID=7045584715
[2026-03-14 13:46:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11308339/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 14:31:17]  *** The last 200 lines of the pilot log: ***
[2026-03-14 14:31:17]  lfn=log.48955015._022516.job.log.tgz.1
[2026-03-14 14:31:17]  mtime=0
[2026-03-14 14:31:17]  protocol_id=None
[2026-03-14 14:31:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 14:31:17]  replicas=None
[2026-03-14 14:31:17]  scope=mc23_13p6TeV
[2026-03-14 14:31:17]  status=None
[2026-03-14 14:31:17]  status_code=0
[2026-03-14 14:31:17]  storage_token=
[2026-03-14 14:31:17]  surl=/tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/log.48955015._022516.job.log.tgz.1
[2026-03-14 14:31:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/d2/log.48955015._022516.job.log.tgz.1
[2026-03-14 14:31:17]  workdir=None
[2026-03-14 14:31:17] ]
[2026-03-14 14:31:17] 2026-03-14 13:30:22,715 | INFO     | transferring file log.48955015._022516.job.log.tgz.1 from /tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/log.48955015._022516.job.log.tgz.1 to /tmp/j
[2026-03-14 14:31:17] 2026-03-14 13:30:22,715 | INFO     | executing command: /usr/bin/env mv /tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/log.48955015._022516.job.log.tgz.1 /tmp/job_11308339/atlas/pilot/sl
[2026-03-14 14:31:17] 2026-03-14 13:30:22,723 | INFO     | adding to output.list: log.48955015._022516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/d2/log.48955015._022516.job.log.tg
[2026-03-14 14:31:17] 2026-03-14 13:30:22,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 14:31:17] 2026-03-14 13:30:22,723 | INFO     | summary of transferred files:
[2026-03-14 14:31:17] 2026-03-14 13:30:22,723 | INFO     |  -- lfn=log.48955015._022516.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 14:31:17] 2026-03-14 13:30:22,723 | INFO     | stage-out finished correctly
[2026-03-14 14:31:17] 2026-03-14 13:30:23,343 | INFO     | PID=6968 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 14:31:17] 2026-03-14 13:30:23,344 | INFO     | .. there are 7 such processes running
[2026-03-14 14:31:17] 2026-03-14 13:30:24,344 | INFO     | time since job start (2657s) is within the limit (345600.0s)
[2026-03-14 14:31:17] 2026-03-14 13:30:24,878 | WARNING  | process 14466 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 14:31:17] 2026-03-14 13:30:24,879 | INFO     | using path: /tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 14:31:17] 2026-03-14 13:30:24,980 | INFO     | number of running child processes to parent process 14466: 1
[2026-03-14 14:31:17] 2026-03-14 13:30:24,980 | INFO     | maximum number of monitored processes: 6
[2026-03-14 14:31:17] 2026-03-14 13:30:25,159 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 14:31:17] 2026-03-14 13:30:25,206 | INFO     | job 7045584715 has state=finished
[2026-03-14 14:31:17] 2026-03-14 13:30:25,206 | INFO     | preparing for final server update for job 7045584715 in state='finished'
[2026-03-14 14:31:17] 2026-03-14 13:30:25,762 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,763 | INFO     | reading metadata from: /tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/jobReport.json
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | added worker_node to metadata from /tmp/job_11308339/atlas/pilot/slots/0/workernode_map.json
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | this job has now completed (state=finished)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | log transfer has been attempted: DONE
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | job 7045584715 has finished - writing final server update
[2026-03-14 14:31:17] 2026-03-14 13:30:25,764 | INFO     | total number of processed events: 400 (read)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | INFO     | using path: /tmp/job_11308339/atlas/pilot/slots/0/PanDA_Pilot-7045584715/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | INFO     | extracted standard info from prmon json
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 14:31:17] 2026-03-14 13:30:25,782 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | fitting pss+swap vs Time
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | sum of square deviations: 15695178.0
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | sum of deviations: -190987278.99999997
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | mean x: 1773493786.0
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | mean y: 2543548.3513513515
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | intersect: 21583359803.608112
[2026-03-14 14:31:17] 2026-03-14 13:30:25,783 | INFO     | chi2: 0.0014197730138428158
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | current memory leak: -12.17 B/s (using 37 data points, chi2=0.00)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | could have reported an average CPU frequency of 2486 MHz (5 samples)
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | ..............................
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . Timing measurements:
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . get job = 0 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . initial setup = 2 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . payload setup = 2 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . stage-in = 0 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . payload execution = 2636 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . stage-out = 0 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | . log creation = 0 s
[2026-03-14 14:31:17] 2026-03-14 13:30:25,784 | INFO     | ..............................
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | 
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | job summary report
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | --------------------------------------------------
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | PanDA job id: 7045584715
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | task id: 48955015
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | errors: (none)
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | pilot state: finished 
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | transexitcode: 0
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | exeerrorcode: 0
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | exeerrordiag: 
[2026-03-14 14:31:17] 2026-03-14 13:30:26,064 | INFO     | exitcode: 0
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | exitmsg: OK
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | cpuconsumptiontime: 19192 s
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | nevents: 400
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | neventsw: 0
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | pid: 14466
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | pgrp: 14466
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | corecount: 8
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | event service: False
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | sizes: {0: 2280362, 11: 2280362, 2642: 2305723, 2644: 2314751, 2646: 2314807, 2647: 2315033}
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | --------------------------------------------------
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | 
[2026-03-14 14:31:17] 2026-03-14 13:30:26,065 | INFO     | executing command: ls -lF /tmp/job_11308339/atlas/pilot/slots/0
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 14:31:17] 2026-03-14 13:30:26,075 | INFO     | job 7045584715 has completed (purged errors)
[2026-03-14 14:31:17] 2026-03-14 13:30:26,076 | INFO     | overall cleanup function is called
[2026-03-14 14:31:17] 2026-03-14 13:30:27,081 | INFO     | --- collectZombieJob: --- 10, [14466]
[2026-03-14 14:31:17] 2026-03-14 13:30:27,081 | INFO     | zombie collector waiting for pid 14466
[2026-03-14 14:31:17] 2026-03-14 13:30:27,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 14:31:17] 2026-03-14 13:30:27,081 | INFO     | collected zombie processes
[2026-03-14 14:31:17] 2026-03-14 13:30:27,081 | INFO     | will attempt to kill all subprocesses of pid=14466
[2026-03-14 14:31:17] 2026-03-14 13:30:27,186 | INFO     | process IDs to be killed: [14466] (in reverse order)
[2026-03-14 14:31:17] 2026-03-14 13:30:27,224 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 14:31:17] 2026-03-14 13:30:27,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 14:31:17] 2026-03-14 13:30:27,228 | INFO     | did not find any defunct processes belonging to 14466
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | did not find any defunct processes belonging to 14466
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | ready for new job
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | **************************************
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | **************************************
[2026-03-14 14:31:17] 2026-03-14 13:30:27,232 | INFO     | 
[2026-03-14 14:31:17] 2026-03-14 13:30:27,247 | INFO     | architecture information:
[2026-03-14 14:31:17] 2026-03-14 13:30:27,247 | INFO     | executing command: cat /etc/os-release
[2026-03-14 14:31:17] 2026-03-14 13:30:27,252 | INFO     | cat /etc/os-release:
[2026-03-14 14:31:17] NAME="CentOS Linux"
[2026-03-14 14:31:17] VERSION="7 (Core)"
[2026-03-14 14:31:17] ID="centos"
[2026-03-14 14:31:17] ID_LIKE="rhel fedora"
[2026-03-14 14:31:17] VERSION_ID="7"
[2026-03-14 14:31:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 14:31:17] ANSI_COLOR="0;31"
[2026-03-14 14:31:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 14:31:17] HOME_URL="https://www.centos.org/"
[2026-03-14 14:31:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 14:31:17] 
[2026-03-14 14:31:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 14:31:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 14:31:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 14:31:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 14:31:17] 
[2026-03-14 14:31:17] 2026-03-14 13:30:27,253 | INFO     | **************************************
[2026-03-14 14:31:17] 2026-03-14 13:30:27,755 | INFO     | executing command: df -mP /tmp/job_11308339/atlas/pilot/slots/0
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | INFO     | sufficient remaining disk space (221384802304 B)
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | INFO     | update_server=False
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 14:31:17] 2026-03-14 13:30:27,761 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:31:17] 2026-03-14 13:30:28,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 14:31:17] 2026-03-14 13:30:28,387 | INFO     | all job control threads have been joined
[2026-03-14 14:31:17] 2026-03-14 13:30:28,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:31:17] 2026-03-14 13:30:28,488 | INFO     | aborting loop
[2026-03-14 14:31:17] 2026-03-14 13:30:28,640 | INFO     | all data control threads have been joined
[2026-03-14 14:31:17] 2026-03-14 13:30:28,642 | INFO     | all payload control threads have been joined
[2026-03-14 14:31:17] 2026-03-14 13:30:28,766 | INFO     | [job] retrieve thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:28,766 | INFO     | [job] queue monitor thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:28,872 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:28,977 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,207 | INFO     | [data] copytool_in thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,393 | INFO     | [job] control thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,444 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,493 | INFO     | [job] job monitor thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,645 | INFO     | [data] control thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:29,648 | INFO     | [payload] control thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:30,002 | INFO     | [payload] validate_post thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:30,174 | INFO     | [job] validate thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:30,285 | INFO     | [data] copytool_out thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:30,290 | INFO     | [payload] failed_post thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:31,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 14:31:17] 2026-03-14 13:30:35,217 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:38,546 | INFO     | job.realtimelogging is not enabled
[2026-03-14 14:31:17] 2026-03-14 13:30:39,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 14:31:17] 2026-03-14 13:30:57,531 | INFO     | PID=6968 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 14:31:17] 2026-03-14 13:30:57,531 | INFO     | .. there are 5 such processes running
[2026-03-14 14:31:17] 2026-03-14 13:30:57,532 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 14:31:17] 2026-03-14 13:30:57,532 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 14:31:17] 2026-03-14 13:30:57,532 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 14:31:17] 2026-03-14 13:31:04,955 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-03-14 14:31:17] 2026-03-14 13:31:11,853 | INFO     | [monitor] cgroup control has ended
[2026-03-14 14:31:17] 2026-03-14 13:31:12,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058988288)>']
[2026-03-14 14:31:17] 2026-03-14 13:31:12,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 14:31:17] 2026-03-14 13:31:12,605 | INFO     | [monitor] control thread has ended
[2026-03-14 14:31:17] 2026-03-14 13:31:17,055 | INFO     | all workflow threads have been joined
[2026-03-14 14:31:17] 2026-03-14 13:31:17,055 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 14:31:17] 2026-03-14 13:31:17,056 | INFO     | traces error code: 0
[2026-03-14 14:31:17] 2026-03-14 13:31:17,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 14:31:17] 2026-03-14 13:31:17,106 [wrapper] ==== pilot stdout END ====
[2026-03-14 14:31:17] 2026-03-14 13:31:17,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 14:31:17] 2026-03-14 13:31:17,108 [wrapper] pilotpid: 6968
[2026-03-14 14:31:17] 2026-03-14 13:31:17,110 [wrapper] Pilot exit status: 0
[2026-03-14 14:31:17] 2026-03-14 13:31:17,113 [wrapper] pandaids: 7045584715
[2026-03-14 14:31:17] 2026-03-14 13:31:17,133 [wrapper] cleanup supervisor_pilot 27929 6969
[2026-03-14 14:31:17] 2026-03-14 13:31:17,134 [wrapper] Test setup, not cleaning
[2026-03-14 14:31:17] 2026-03-14 13:31:17,135 [wrapper] apfmon messages muted
[2026-03-14 14:31:17] 2026-03-14 13:31:17,136 [wrapper] ==== wrapper stdout END ====
[2026-03-14 14:31:17] 2026-03-14 13:31:17,137 [wrapper] ==== wrapper stderr END ====
[2026-03-14 14:31:17]  *** Error codes and diagnostics ***
[2026-03-14 14:31:17]     "exeErrorCode": 0,
[2026-03-14 14:31:17]     "exeErrorDiag": "",
[2026-03-14 14:31:17]     "pilotErrorCode": 0,
[2026-03-14 14:31:17]     "pilotErrorDiag": "",
[2026-03-14 14:31:17]  *** Listing of results directory ***
[2026-03-14 14:31:17] total 619880
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-14 14:31:17] -rwx------ 1 mf493845 unix-user     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      5111 Mar 14 02:50 queuedata.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       100 Mar 14 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 14:31:17] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 14 11:54 run_atlas
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       105 Mar 14 11:54 job.xml
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user 438268180 Mar 14 13:46 EVNT.46701403._002508.pool.root.1
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 13:46 start_atlas.sh
[2026-03-14 14:31:17] drwxrwx--x 2 mf493845 unix-user       100 Mar 14 13:46 shared
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user    597527 Mar 14 13:46 input.tar.gz
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      6391 Mar 14 13:46 init_data.xml
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user         0 Mar 14 13:46 boinc_setup_complete
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      8192 Mar 14 13:46 boinc_mmap_file
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user         0 Mar 14 13:46 boinc_lockfile
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      2571 Mar 14 13:46 pandaJob.out
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user   1004579 Mar 14 13:46 agis_schedconf.cvmfs.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user   1511579 Mar 14 13:46 agis_ddmendpoints.agis.ALL.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       420 Mar 14 13:46 workernode_map.json
[2026-03-14 14:31:17] drwx------ 5 mf493845 unix-user       440 Mar 14 13:46 pilot3
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user 191102268 Mar 14 14:29 HITS.48955015._022516.pool.root.1
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      1014 Mar 14 14:30 memory_monitor_summary.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user    309128 Mar 14 14:30 log.48955015._022516.job.log.tgz.1
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      6315 Mar 14 14:30 heartbeat.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user        95 Mar 14 14:30 pilot_heartbeat.json
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      4902 Mar 14 14:31 pilotlog.txt
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user    427671 Mar 14 14:31 log.48955015._022516.job.log.1
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       357 Mar 14 14:31 output.list
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       620 Mar 14 14:31 runtime_log
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user    757760 Mar 14 14:31 result.tar.gz
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user      9219 Mar 14 14:31 runtime_log.err
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user       641 Mar 14 14:31 h0xLDmbJTL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVyoLDm9XLzgm.diag
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user     22218 Mar 14 14:31 stderr.txt
[2026-03-14 14:31:17] HITS file was successfully produced:
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user 191102268 Mar 14 14:29 shared/HITS.pool.root.1
[2026-03-14 14:31:17]  *** Contents of shared directory: ***
[2026-03-14 14:31:17] total 615964
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user 438268180 Mar 14 13:46 ATLAS.root_0
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 13:46 start_atlas.sh
[2026-03-14 14:31:17] -rw-r--r-- 2 mf493845 unix-user    597527 Mar 14 13:46 input.tar.gz
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user 191102268 Mar 14 14:29 HITS.pool.root.1
[2026-03-14 14:31:17] -rw------- 1 mf493845 unix-user    757760 Mar 14 14:31 result.tar.gz
14:31:18 (2851): run_atlas exited; CPU time 19233.864396
14:31:18 (2851): called boinc_finish(0)

</stderr_txt>
]]>

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