Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:20:19 (2749327): wrapper (7.7.26015): starting
22:20:19 (2749327): wrapper: running run_atlas (--nthreads 2)
[2026-03-14 22:20:19] Arguments: --nthreads 2
[2026-03-14 22:20:19] Threads: 2
[2026-03-14 22:20:19] Checking for CVMFS
[2026-03-14 22:20:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 22:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 22:20:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 22:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 22:20:20] 2.9.2.0 2369423 3674 58300 157290 0 50 30892570 36864001 0 130560 0 1057504 99.977 140365 13189 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 22:20:20] CVMFS is ok
[2026-03-14 22:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 22:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 22:20:20] Further information can be found at the LHC@home message board.
[2026-03-14 22:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 22:20:20] Checking for apptainer binary...
[2026-03-14 22:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 22:20:20] Running /usr/bin/apptainer --version
[2026-03-14 22:20:20] apptainer version 1.4.1-1.1
[2026-03-14 22:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 22:20:20] thA310
[2026-03-14 22:20:20] apptainer works
[2026-03-14 22:20:20] Set ATHENA_PROC_NUMBER=2
[2026-03-14 22:20:20] Set ATHENA_CORE_NUMBER=2
[2026-03-14 22:20:20] Starting ATLAS job with PandaID=7054482756
[2026-03-14 22:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 00:54:21]  *** The last 200 lines of the pilot log: ***
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 00:54:21] 2026-03-14 23:53:50,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 00:54:21] 2026-03-14 23:53:50,309 | INFO     | job 7054482756 has completed (purged errors)
[2026-03-15 00:54:21] 2026-03-14 23:53:50,309 | INFO     | overall cleanup function is called
[2026-03-15 00:54:21] 2026-03-14 23:53:51,315 | INFO     | --- collectZombieJob: --- 10, [2757774]
[2026-03-15 00:54:21] 2026-03-14 23:53:51,315 | INFO     | zombie collector waiting for pid 2757774
[2026-03-15 00:54:21] 2026-03-14 23:53:51,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 00:54:21] 2026-03-14 23:53:51,316 | INFO     | collected zombie processes
[2026-03-15 00:54:21] 2026-03-14 23:53:51,316 | INFO     | will attempt to kill all subprocesses of pid=2757774
[2026-03-15 00:54:21] 2026-03-14 23:53:51,354 | INFO     | process IDs to be killed: [2757774] (in reverse order)
[2026-03-15 00:54:21] 2026-03-14 23:53:51,377 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 00:54:21] 2026-03-14 23:53:51,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 00:54:21] 2026-03-14 23:53:51,382 | INFO     | did not find any defunct processes belonging to 2757774
[2026-03-15 00:54:21] 2026-03-14 23:53:51,386 | INFO     | did not find any defunct processes belonging to 2757774
[2026-03-15 00:54:21] 2026-03-14 23:53:51,387 | INFO     | ready for new job
[2026-03-15 00:54:21] 2026-03-14 23:53:51,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 00:54:21] 2026-03-14 23:53:51,389 | INFO     | **************************************
[2026-03-15 00:54:21] 2026-03-14 23:53:51,389 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 00:54:21] 2026-03-14 23:53:51,390 | INFO     | **************************************
[2026-03-15 00:54:21] 2026-03-14 23:53:51,390 | INFO     | 
[2026-03-15 00:54:21] 2026-03-14 23:53:51,391 | INFO     | architecture information:
[2026-03-15 00:54:21] 2026-03-14 23:53:51,391 | INFO     | executing command: cat /etc/os-release
[2026-03-15 00:54:21] 2026-03-14 23:53:51,417 | INFO     | cat /etc/os-release:
[2026-03-15 00:54:21] NAME="CentOS Linux"
[2026-03-15 00:54:21] VERSION="7 (Core)"
[2026-03-15 00:54:21] ID="centos"
[2026-03-15 00:54:21] ID_LIKE="rhel fedora"
[2026-03-15 00:54:21] VERSION_ID="7"
[2026-03-15 00:54:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 00:54:21] ANSI_COLOR="0;31"
[2026-03-15 00:54:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 00:54:21] HOME_URL="https://www.centos.org/"
[2026-03-15 00:54:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 00:54:21] 
[2026-03-15 00:54:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 00:54:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 00:54:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 00:54:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 00:54:21] 
[2026-03-15 00:54:21] 2026-03-14 23:53:51,417 | INFO     | **************************************
[2026-03-15 00:54:21] 2026-03-14 23:53:51,921 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | INFO     | sufficient remaining disk space (492623101952 B)
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | INFO     | update_server=False
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 00:54:21] 2026-03-14 23:53:51,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:54:21] 2026-03-14 23:53:51,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:54:21] 2026-03-14 23:53:51,935 | INFO     | aborting loop
[2026-03-15 00:54:21] 2026-03-14 23:53:52,222 | INFO     | [monitor] cgroup control has ended
[2026-03-15 00:54:21] 2026-03-14 23:53:52,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 00:54:21] 2026-03-14 23:53:52,555 | INFO     | all payload control threads have been joined
[2026-03-15 00:54:21] 2026-03-14 23:53:52,940 | INFO     | [job] retrieve thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:52,941 | INFO     | [job] queue monitor thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:52,942 | INFO     | [job] job monitor thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,010 | INFO     | all data control threads have been joined
[2026-03-15 00:54:21] 2026-03-14 23:53:53,072 | INFO     | all job control threads have been joined
[2026-03-15 00:54:21] 2026-03-14 23:53:53,471 | INFO     | [job] validate thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,511 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,522 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,561 | INFO     | [payload] control thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,642 | INFO     | [data] copytool_in thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,801 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:53,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 00:54:21] 2026-03-14 23:53:53,949 | INFO     | [payload] validate_post thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:54,016 | INFO     | [data] control thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:54,078 | INFO     | [job] control thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:54,254 | INFO     | [payload] failed_post thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:54,350 | INFO     | [data] copytool_out thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:53:57,884 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:54:02,785 | INFO     | job.realtimelogging is not enabled
[2026-03-15 00:54:21] 2026-03-14 23:54:03,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 00:54:21] 2026-03-14 23:54:03,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688572307264)>', '<ExcThread(monitor, started 140687559358208)>']
[2026-03-15 00:54:21] 2026-03-14 23:54:08,882 | INFO     | all workflow threads have been joined
[2026-03-15 00:54:21] 2026-03-14 23:54:08,884 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 00:54:21] 2026-03-14 23:54:08,884 | INFO     | traces error code: 0
[2026-03-15 00:54:21] 2026-03-14 23:54:08,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 00:54:21] 2026-03-14 23:54:21,631 | INFO     | PID=2753359 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 00:54:21] 2026-03-14 23:54:21,632 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 00:54:21] 2026-03-14 23:54:21,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 00:54:21] 2026-03-14 23:54:21,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 00:54:21] 2026-03-14 23:54:21,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 00:54:21] 2026-03-14 23:54:21,632 | INFO     | [monitor] control thread has ended
[2026-03-15 00:54:21] 2026-03-14 23:54:21,672 [wrapper] ==== pilot stdout END ====
[2026-03-15 00:54:21] 2026-03-14 23:54:21,674 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 00:54:21] 2026-03-14 23:54:21,676 [wrapper] pilotpid: 2753359
[2026-03-15 00:54:21] 2026-03-14 23:54:21,678 [wrapper] Pilot exit status: 0
[2026-03-15 00:54:21] 2026-03-14 23:54:21,685 [wrapper] pandaids: 7054482756
[2026-03-15 00:54:21] 2026-03-14 23:54:21,697 [wrapper] cleanup supervisor_pilot 2764791 2753360
[2026-03-15 00:54:21] 2026-03-14 23:54:21,700 [wrapper] Test setup, not cleaning
[2026-03-15 00:54:21] 2026-03-14 23:54:21,701 [wrapper] apfmon messages muted
[2026-03-15 00:54:21] 2026-03-14 23:54:21,703 [wrapper] ==== wrapper stdout END ====
[2026-03-15 00:54:21] 2026-03-14 23:54:21,705 [wrapper] ==== wrapper stderr END ====
[2026-03-15 00:54:21]  *** Error codes and diagnostics ***
[2026-03-15 00:54:21]     "exeErrorCode": 0,
[2026-03-15 00:54:21]     "exeErrorDiag": "",
[2026-03-15 00:54:21]     "pilotErrorCode": 0,
[2026-03-15 00:54:21]     "pilotErrorDiag": "",
[2026-03-15 00:54:21]  *** Listing of results directory ***
[2026-03-15 00:54:21] total 409808
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc    585013 Mar 14 09:39 pilot3.tar.gz
[2026-03-15 00:54:21] -rwx------ 1 boinc boinc     36322 Mar 14 09:39 runpilot2-wrapper.sh
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc      5111 Mar 14 09:41 queuedata.json
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc       100 Mar 14 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 00:54:21] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 22:20 run_atlas
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc       105 Mar 14 22:20 job.xml
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc 213161178 Mar 14 22:20 EVNT.48967083._000920.pool.root.1
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc    597530 Mar 14 22:20 input.tar.gz
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc     15845 Mar 14 22:20 start_atlas.sh
[2026-03-15 00:54:21] drwxrwx--x 2 boinc boinc      4096 Mar 14 22:20 shared
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc         0 Mar 14 22:20 boinc_setup_complete
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc      6205 Mar 14 22:20 init_data.xml
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc         0 Mar 14 22:20 boinc_lockfile
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc      2564 Mar 14 22:20 pandaJob.out
[2026-03-15 00:54:21] -rw------- 1 boinc boinc   1006481 Mar 14 22:20 agis_schedconf.cvmfs.json
[2026-03-15 00:54:21] -rw------- 1 boinc boinc   1511579 Mar 14 22:20 agis_ddmendpoints.agis.ALL.json
[2026-03-15 00:54:21] -rw------- 1 boinc boinc       419 Mar 14 22:20 workernode_map.json
[2026-03-15 00:54:21] drwx------ 5 boinc boinc      4096 Mar 14 22:20 pilot3
[2026-03-15 00:54:21] -rw------- 1 boinc boinc 199331021 Mar 15 00:53 HITS.48967085._022803.pool.root.1
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc       529 Mar 15 00:53 boinc_task_state.xml
[2026-03-15 00:54:21] -rw------- 1 boinc boinc      1032 Mar 15 00:53 memory_monitor_summary.json
[2026-03-15 00:54:21] -rw------- 1 boinc boinc    305890 Mar 15 00:53 log.48967085._022803.job.log.tgz.1
[2026-03-15 00:54:21] -rw------- 1 boinc boinc      6300 Mar 15 00:53 heartbeat.json
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc      8192 Mar 15 00:54 boinc_mmap_file
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc        27 Mar 15 00:54 wrapper_checkpoint.txt
[2026-03-15 00:54:21] -rw------- 1 boinc boinc       747 Mar 15 00:54 pilotlog.txt
[2026-03-15 00:54:21] -rw------- 1 boinc boinc        95 Mar 15 00:54 pilot_heartbeat.json
[2026-03-15 00:54:21] -rw------- 1 boinc boinc   1309835 Mar 15 00:54 log.48967085._022803.job.log.1
[2026-03-15 00:54:21] -rw------- 1 boinc boinc       357 Mar 15 00:54 output.list
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc       620 Mar 15 00:54 runtime_log
[2026-03-15 00:54:21] -rw------- 1 boinc boinc   1638400 Mar 15 00:54 result.tar.gz
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc      8896 Mar 15 00:54 runtime_log.err
[2026-03-15 00:54:21] -rw------- 1 boinc boinc       657 Mar 15 00:54 RBDNDmwhZL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFdpLDmt4TiQm.diag
[2026-03-15 00:54:21] -rw-r--r-- 1 boinc boinc     11816 Mar 15 00:54 stderr.txt
[2026-03-15 00:54:21] HITS file was successfully produced:
[2026-03-15 00:54:21] -rw------- 1 boinc boinc 199331021 Mar 15 00:53 shared/HITS.pool.root.1
[2026-03-15 00:54:21]  *** Contents of shared directory: ***
[2026-03-15 00:54:21] total 405032
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc 213161178 Mar 14 22:20 ATLAS.root_0
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc    597530 Mar 14 22:20 input.tar.gz
[2026-03-15 00:54:21] -rw-r--r-- 2 boinc boinc     15845 Mar 14 22:20 start_atlas.sh
[2026-03-15 00:54:21] -rw------- 1 boinc boinc 199331021 Mar 15 00:53 HITS.pool.root.1
[2026-03-15 00:54:21] -rw------- 1 boinc boinc   1638400 Mar 15 00:54 result.tar.gz
00:54:23 (2749327): run_atlas exited; CPU time 17750.543904
00:54:23 (2749327): called boinc_finish(0)

</stderr_txt>
]]>

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