Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:05:34 (756): wrapper (7.7.26015): starting
21:05:34 (756): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 21:05:34] Arguments: --nthreads 8
[2026-03-14 21:05:34] Threads: 8
[2026-03-14 21:05:34] Checking for CVMFS
[2026-03-14 21:05:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 21:05:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 21:05:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 21:05:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 21:05:38] 2.11.2.0 20655 128031 137920 157288 0 54 18677783 25165824 4784 130560 155 39723866 99.834 26876544 965 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 21:05:38] CVMFS is ok
[2026-03-14 21:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:05:38] Checking for apptainer binary...
[2026-03-14 21:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 21:05:38] Running /usr/bin/apptainer --version
[2026-03-14 21:05:38] apptainer version 1.3.2-1.el7
[2026-03-14 21:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:05:42] cg-vwn401.simple-grid.lan
[2026-03-14 21:05:42] apptainer works
[2026-03-14 21:05:42] Set ATHENA_PROC_NUMBER=8
[2026-03-14 21:05:42] Set ATHENA_CORE_NUMBER=8
[2026-03-14 21:05:42] Starting ATLAS job with PandaID=7046305240
[2026-03-14 21:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 00:59:37]  *** The last 200 lines of the pilot log: ***
[2026-03-15 00:59:37] 2026-03-14 23:58:36,570 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7046305240/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,570 | INFO     | extracted standard info from prmon json
[2026-03-15 00:59:37] 2026-03-14 23:58:36,570 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 00:59:37] 2026-03-14 23:58:36,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 00:59:37] 2026-03-14 23:58:36,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 00:59:37] 2026-03-14 23:58:36,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 00:59:37] 2026-03-14 23:58:36,576 | INFO     | fitting pss+swap vs Time
[2026-03-15 00:59:37] 2026-03-14 23:58:36,576 | INFO     | sum of square deviations: 3301699115.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,578 | INFO     | sum of deviations: 32263639258.999996
[2026-03-15 00:59:37] 2026-03-14 23:58:36,578 | INFO     | mean x: 1773526012.5
[2026-03-15 00:59:37] 2026-03-14 23:58:36,578 | INFO     | mean y: 2474222.5090909093
[2026-03-15 00:59:37] 2026-03-14 23:58:36,578 | INFO     | intersect: -17328118751.20975
[2026-03-15 00:59:37] 2026-03-14 23:58:36,579 | INFO     | chi2: 6.312553424346194
[2026-03-15 00:59:37] 2026-03-14 23:58:36,579 | INFO     | sum of square deviations: 3081657780.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,581 | INFO     | sum of deviations: 46078262044.999985
[2026-03-15 00:59:37] 2026-03-14 23:58:36,581 | INFO     | mean x: 1773525860.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,584 | INFO     | mean y: 2483611.9720930234
[2026-03-15 00:59:37] 2026-03-14 23:58:36,584 | INFO     | intersect: -26516031795.882168
[2026-03-15 00:59:37] 2026-03-14 23:58:36,585 | INFO     | chi2: 5.602703984919991
[2026-03-15 00:59:37] 2026-03-14 23:58:36,585 | INFO     | current chi2=5.602703984919991 (change=11.245044464708414 %)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,585 | INFO     | right removable region: 214
[2026-03-15 00:59:37] 2026-03-14 23:58:36,585 | INFO     | sum of square deviations: 3081657780.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,587 | INFO     | sum of deviations: -41911453488.00001
[2026-03-15 00:59:37] 2026-03-14 23:58:36,587 | INFO     | mean x: 1773526165.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,587 | INFO     | mean y: 2525576.088372093
[2026-03-15 00:59:37] 2026-03-14 23:58:36,587 | INFO     | intersect: 24123003799.386913
[2026-03-15 00:59:37] 2026-03-14 23:58:36,588 | INFO     | chi2: 1.8395838364389827
[2026-03-15 00:59:37] 2026-03-14 23:58:36,588 | INFO     | current chi2=1.8395838364389827 (change=70.85832447224773 %)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,588 | INFO     | sum of square deviations: 2871616632.5
[2026-03-15 00:59:37] 2026-03-14 23:58:36,590 | INFO     | sum of deviations: -68345774726.500046
[2026-03-15 00:59:37] 2026-03-14 23:58:36,590 | INFO     | mean x: 1773526317.5
[2026-03-15 00:59:37] 2026-03-14 23:58:36,590 | INFO     | mean y: 2544604.7095238096
[2026-03-15 00:59:37] 2026-03-14 23:58:36,590 | INFO     | intersect: 42213273152.35949
[2026-03-15 00:59:37] 2026-03-14 23:58:36,591 | INFO     | chi2: 1.0059677464847703
[2026-03-15 00:59:37] 2026-03-14 23:58:36,591 | INFO     | current chi2=1.0059677464847703 (change=45.3154715453417 %)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,591 | INFO     | sum of square deviations: 2671343110.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,593 | INFO     | sum of deviations: -65297529971.00001
[2026-03-15 00:59:37] 2026-03-14 23:58:36,595 | INFO     | mean x: 1773526470.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,595 | INFO     | mean y: 2542253.6634146343
[2026-03-15 00:59:37] 2026-03-14 23:58:36,595 | INFO     | intersect: 43354104767.54312
[2026-03-15 00:59:37] 2026-03-14 23:58:36,596 | INFO     | chi2: 0.9959555170077685
[2026-03-15 00:59:37] 2026-03-14 23:58:36,596 | INFO     | current chi2=0.9959555170077685 (change=0.9952833489928729 %)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,596 | INFO     | left removable region: 30
[2026-03-15 00:59:37] 2026-03-14 23:58:36,597 | INFO     | sum of square deviations: 1931608310.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,598 | INFO     | sum of deviations: -32557051333.0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,598 | INFO     | mean x: 1773526744.5
[2026-03-15 00:59:37] 2026-03-14 23:58:36,598 | INFO     | mean y: 2538602.3804347827
[2026-03-15 00:59:37] 2026-03-14 23:58:36,598 | INFO     | intersect: 29895142067.694202
[2026-03-15 00:59:37] 2026-03-14 23:58:36,599 | INFO     | chi2: 0.18586049714391198
[2026-03-15 00:59:37] 2026-03-14 23:58:36,599 | INFO     | current memory leak: -16.85 B/s (using 184 data points, chi2=0.19)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,599 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | ..............................
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . Timing measurements:
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . get job = 0 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . initial setup = 104 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . payload setup = 138 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . stage-in = 0 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . payload execution = 13497 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . stage-out = 4 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | . log creation = 1 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,600 | INFO     | ..............................
[2026-03-15 00:59:37] 2026-03-14 23:58:36,753 | INFO     | 
[2026-03-15 00:59:37] 2026-03-14 23:58:36,753 | INFO     | job summary report
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | --------------------------------------------------
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | PanDA job id: 7046305240
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | task id: 48955010
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | errors: (none)
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | pilot state: finished 
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | transexitcode: 0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | exeerrorcode: 0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,754 | INFO     | exeerrordiag: 
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | exitcode: 0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | exitmsg: OK
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | cpuconsumptiontime: 51853 s
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | nevents: 400
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | neventsw: 0
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | pid: 9431
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | pgrp: 9431
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | corecount: 8
[2026-03-15 00:59:37] 2026-03-14 23:58:36,755 | INFO     | event service: False
[2026-03-15 00:59:37] 2026-03-14 23:58:36,756 | INFO     | sizes: {0: 2279089, 1: 2279775, 2: 2280236, 13639: 2310414, 13640: 2310413, 13645: 2319469, 13648: 2319847}
[2026-03-15 00:59:37] 2026-03-14 23:58:36,756 | INFO     | --------------------------------------------------
[2026-03-15 00:59:37] 2026-03-14 23:58:36,756 | INFO     | 
[2026-03-15 00:59:37] 2026-03-14 23:58:36,756 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-15 00:59:37] 2026-03-14 23:58:37,110 | INFO     | time since job start (13651s) is within the limit (345600.0s)
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 00:59:37] 2026-03-14 23:58:37,276 | INFO     | job 7046305240 has completed (purged errors)
[2026-03-15 00:59:37] 2026-03-14 23:58:37,277 | INFO     | overall cleanup function is called
[2026-03-15 00:59:37] 2026-03-14 23:58:38,285 | INFO     | --- collectZombieJob: --- 10, [9431]
[2026-03-15 00:59:37] 2026-03-14 23:58:38,285 | INFO     | zombie collector waiting for pid 9431
[2026-03-15 00:59:37] 2026-03-14 23:58:38,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 00:59:37] 2026-03-14 23:58:38,286 | INFO     | collected zombie processes
[2026-03-15 00:59:37] 2026-03-14 23:58:38,286 | INFO     | will attempt to kill all subprocesses of pid=9431
[2026-03-15 00:59:37] 2026-03-14 23:58:38,415 | INFO     | process IDs to be killed: [9431] (in reverse order)
[2026-03-15 00:59:37] 2026-03-14 23:58:39,009 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 00:59:37] 2026-03-14 23:58:39,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 00:59:37] 2026-03-14 23:58:39,012 | INFO     | did not find any defunct processes belonging to 9431
[2026-03-15 00:59:37] 2026-03-14 23:58:39,015 | INFO     | did not find any defunct processes belonging to 9431
[2026-03-15 00:59:37] 2026-03-14 23:58:39,015 | INFO     | ready for new job
[2026-03-15 00:59:37] 2026-03-14 23:58:39,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 00:59:37] 2026-03-14 23:58:39,017 | INFO     | **************************************
[2026-03-15 00:59:37] 2026-03-14 23:58:39,017 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 00:59:37] 2026-03-14 23:58:39,017 | INFO     | **************************************
[2026-03-15 00:59:37] 2026-03-14 23:58:39,018 | INFO     | 
[2026-03-15 00:59:37] 2026-03-14 23:58:39,018 | INFO     | pilot is running in a VM
[2026-03-15 00:59:37] 2026-03-14 23:58:39,018 | INFO     | architecture information:
[2026-03-15 00:59:37] 2026-03-14 23:58:39,019 | INFO     | executing command: cat /etc/os-release
[2026-03-15 00:59:37] 2026-03-14 23:58:39,173 | INFO     | cat /etc/os-release:
[2026-03-15 00:59:37] NAME="CentOS Linux"
[2026-03-15 00:59:37] VERSION="7 (Core)"
[2026-03-15 00:59:37] ID="centos"
[2026-03-15 00:59:37] ID_LIKE="rhel fedora"
[2026-03-15 00:59:37] VERSION_ID="7"
[2026-03-15 00:59:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 00:59:37] ANSI_COLOR="0;31"
[2026-03-15 00:59:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 00:59:37] HOME_URL="https://www.centos.org/"
[2026-03-15 00:59:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 00:59:37] 
[2026-03-15 00:59:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 00:59:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 00:59:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 00:59:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 00:59:37] 
[2026-03-15 00:59:37] 2026-03-14 23:58:39,174 | INFO     | **************************************
[2026-03-15 00:59:37] 2026-03-14 23:58:39,677 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-15 00:59:37] 2026-03-14 23:58:39,811 | INFO     | sufficient remaining disk space (496028876800 B)
[2026-03-15 00:59:37] 2026-03-14 23:58:39,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 00:59:37] 2026-03-14 23:58:39,811 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 00:59:37] 2026-03-14 23:58:39,811 | INFO     | update_server=False
[2026-03-15 00:59:37] 2026-03-14 23:58:39,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 00:59:37] 2026-03-14 23:58:39,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 00:59:37] 2026-03-14 23:58:40,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 00:59:37] 2026-03-14 23:58:40,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 00:59:37] 2026-03-14 23:58:40,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:59:37] 2026-03-14 23:58:40,268 | INFO     | will abort loop
[2026-03-15 00:59:37] 2026-03-14 23:58:40,773 | INFO     | all job control threads have been joined
[2026-03-15 00:59:37] 2026-03-14 23:58:40,819 | INFO     | [job] retrieve thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:40,881 | INFO     | all data control threads have been joined
[2026-03-15 00:59:37] 2026-03-14 23:58:40,908 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,104 | INFO     | [data] copytool_in thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,261 | INFO     | all payload control threads have been joined
[2026-03-15 00:59:37] 2026-03-14 23:58:41,273 | INFO     | [job] job monitor thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,750 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,753 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 00:59:37] 2026-03-14 23:58:41,779 | INFO     | [job] control thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,819 | INFO     | [payload] validate_post thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,822 | INFO     | [data] copytool_out thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:41,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 00:59:37] 2026-03-14 23:58:41,887 | INFO     | [data] control thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:42,221 | INFO     | [payload] failed_post thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:42,267 | INFO     | [payload] control thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:42,308 | INFO     | [job] validate thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:42,773 | INFO     | [job] queue monitor thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:58:45,880 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 00:59:37] 2026-03-14 23:59:10,307 | INFO     | PID=4883 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-15 00:59:37] 2026-03-14 23:59:10,308 | INFO     | .. there are 9 such processes running
[2026-03-15 00:59:37] 2026-03-14 23:59:10,309 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 00:59:37] 2026-03-14 23:59:10,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 00:59:37] 2026-03-14 23:59:10,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 00:59:37] 2026-03-14 23:59:28,778 | INFO     | [monitor] cgroup control has ended
[2026-03-15 00:59:37] 2026-03-14 23:59:29,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451373872960)>', '<ExcThread(monitor, started 140450782500608)>']
[2026-03-15 00:59:37] 2026-03-14 23:59:29,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 00:59:37] 2026-03-14 23:59:29,422 | INFO     | [monitor] control thread has ended
[2026-03-15 00:59:37] 2026-03-14 23:59:34,315 | INFO     | all workflow threads have been joined
[2026-03-15 00:59:37] 2026-03-14 23:59:34,315 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 00:59:37] 2026-03-14 23:59:34,316 | INFO     | traces error code: 0
[2026-03-15 00:59:37] 2026-03-14 23:59:34,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 00:59:37] 2026-03-14 23:59:34,605 [wrapper] ==== pilot stdout END ====
[2026-03-15 00:59:37] 2026-03-14 23:59:34,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 00:59:37] 2026-03-14 23:59:34,674 [wrapper] pilotpid: 4883
[2026-03-15 00:59:37] 2026-03-14 23:59:34,733 [wrapper] Pilot exit status: 0
[2026-03-15 00:59:37] 2026-03-14 23:59:34,950 [wrapper] pandaids: 7046305240
[2026-03-15 00:59:37] 2026-03-14 23:59:35,057 [wrapper] cleanup supervisor_pilot 17356 4884
[2026-03-15 00:59:37] 2026-03-14 23:59:35,119 [wrapper] Test setup, not cleaning
[2026-03-15 00:59:37] 2026-03-14 23:59:35,197 [wrapper] apfmon messages muted
[2026-03-15 00:59:37] 2026-03-14 23:59:35,281 [wrapper] ==== wrapper stdout END ====
[2026-03-15 00:59:37] 2026-03-14 23:59:35,349 [wrapper] ==== wrapper stderr END ====
[2026-03-15 00:59:37]  *** Error codes and diagnostics ***
[2026-03-15 00:59:37]     "exeErrorCode": 0,
[2026-03-15 00:59:37]     "exeErrorDiag": "",
[2026-03-15 00:59:37]     "pilotErrorCode": 0,
[2026-03-15 00:59:37]     "pilotErrorDiag": "",
[2026-03-15 00:59:37]  *** Listing of results directory ***
[2026-03-15 00:59:37] total 616400
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc      5111 Mar 14 09:37 queuedata.json
[2026-03-15 00:59:37] -rwx------. 1 boinc boinc     36322 Mar 14 09:37 runpilot2-wrapper.sh
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc    585013 Mar 14 09:39 pilot3.tar.gz
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc       100 Mar 14 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 00:59:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 21:05 run_atlas
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc       105 Mar 14 21:05 job.xml
[2026-03-15 00:59:37] -rw-r--r--. 2 boinc boinc 437678788 Mar 14 21:05 EVNT.46701403._001811.pool.root.1
[2026-03-15 00:59:37] drwxrwx--x. 2 boinc boinc        68 Mar 14 21:05 shared
[2026-03-15 00:59:37] -rw-r--r--. 2 boinc boinc    597533 Mar 14 21:05 input.tar.gz
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc      6392 Mar 14 21:05 init_data.xml
[2026-03-15 00:59:37] -rw-r--r--. 2 boinc boinc     15845 Mar 14 21:05 start_atlas.sh
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc         0 Mar 14 21:05 boinc_lockfile
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc      2563 Mar 14 21:05 pandaJob.out
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc       415 Mar 14 21:10 workernode_map.json
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc   1005897 Mar 14 21:11 agis_schedconf.cvmfs.json
[2026-03-15 00:59:37] drwx------. 5 boinc boinc      4096 Mar 14 21:11 pilot3
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc 184876952 Mar 15 00:57 HITS.48955010._039561.pool.root.1
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc       531 Mar 15 00:57 boinc_task_state.xml
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc      1013 Mar 15 00:58 memory_monitor_summary.json
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc   1511579 Mar 15 00:58 agis_ddmendpoints.agis.ALL.json
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc    456304 Mar 15 00:58 log.48955010._039561.job.log.tgz.1
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc      6329 Mar 15 00:58 heartbeat.json
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc        95 Mar 15 00:59 pilot_heartbeat.json
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc      8192 Mar 15 00:59 boinc_mmap_file
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc        28 Mar 15 00:59 wrapper_checkpoint.txt
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc      5066 Mar 15 00:59 pilotlog.txt
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc   1903971 Mar 15 00:59 log.48955010._039561.job.log.1
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc       357 Mar 15 00:59 output.list
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc       620 Mar 15 00:59 runtime_log
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc   2375680 Mar 15 00:59 result.tar.gz
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc      8832 Mar 15 00:59 runtime_log.err
[2026-03-15 00:59:37] -rw-------. 1 boinc boinc       656 Mar 15 00:59 JIyMDmXgZL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsJsLDmNWwPjm.diag
[2026-03-15 00:59:37] -rw-r--r--. 1 boinc boinc     20729 Mar 15 00:59 stderr.txt
[2026-03-15 00:59:38] HITS file was successfully produced:
[2026-03-15 00:59:38] -rw-------. 1 boinc boinc 184876952 Mar 15 00:57 shared/HITS.pool.root.1
[2026-03-15 00:59:38]  *** Contents of shared directory: ***
[2026-03-15 00:59:38] total 610888
[2026-03-15 00:59:38] -rw-r--r--. 2 boinc boinc 437678788 Mar 14 21:05 ATLAS.root_0
[2026-03-15 00:59:38] -rw-r--r--. 2 boinc boinc    597533 Mar 14 21:05 input.tar.gz
[2026-03-15 00:59:38] -rw-r--r--. 2 boinc boinc     15845 Mar 14 21:05 start_atlas.sh
[2026-03-15 00:59:38] -rw-------. 1 boinc boinc 184876952 Mar 15 00:57 HITS.pool.root.1
[2026-03-15 00:59:38] -rw-------. 1 boinc boinc   2375680 Mar 15 00:59 result.tar.gz
00:59:40 (756): run_atlas exited; CPU time 52055.731891
00:59:40 (756): called boinc_finish(0)

</stderr_txt>
]]>

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