Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:01:23 (486845): wrapper (7.7.26015): starting
23:01:23 (486845): wrapper: running run_atlas (--nthreads 3)
[2026-03-16 23:01:23] Arguments: --nthreads 3
[2026-03-16 23:01:23] Threads: 3
[2026-03-16 23:01:23] Checking for CVMFS
[2026-03-16 23:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 23:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 23:01:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 23:01:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 23:01:26] 2.13.3.0 4272 26811 50268 157351 0 188 2787158 4096000 0 130560 0 1565629 99.925 941720 77 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-03-16 23:01:26] CVMFS is ok
[2026-03-16 23:01:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 23:01:26] Checking for apptainer binary...
[2026-03-16 23:01:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 23:01:26] Running /usr/bin/apptainer --version
[2026-03-16 23:01:26] apptainer version 1.4.5
[2026-03-16 23:01:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 23:01:26] ahanllin07
[2026-03-16 23:01:26] apptainer works
[2026-03-16 23:01:26] Set ATHENA_PROC_NUMBER=3
[2026-03-16 23:01:26] Set ATHENA_CORE_NUMBER=3
[2026-03-16 23:01:26] Starting ATLAS job with PandaID=7046305376
[2026-03-16 23:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 08:22:50]  *** The last 200 lines of the pilot log: ***
[2026-03-17 08:22:50] 2026-03-17 07:21:58,140 | INFO     | job 7046305376 has state=finished
[2026-03-17 08:22:50] 2026-03-17 07:21:58,141 | INFO     | preparing for final server update for job 7046305376 in state='finished'
[2026-03-17 08:22:50] 2026-03-17 07:21:58,141 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7046305376/jobReport.json
[2026-03-17 08:22:50] 2026-03-17 07:21:58,145 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-17 08:22:50] 2026-03-17 07:21:58,146 | INFO     | this job has now completed (state=finished)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,147 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,147 | INFO     | log transfer has been attempted: DONE
[2026-03-17 08:22:50] 2026-03-17 07:21:58,147 | INFO     | job 7046305376 has finished - writing final server update
[2026-03-17 08:22:50] 2026-03-17 07:21:58,148 | INFO     | total number of processed events: 400 (read)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,149 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7046305376/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,150 | INFO     | extracted standard info from prmon json
[2026-03-17 08:22:50] 2026-03-17 07:21:58,151 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 08:22:50] 2026-03-17 07:21:58,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 08:22:50] 2026-03-17 07:21:58,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 08:22:50] 2026-03-17 07:21:58,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 08:22:50] 2026-03-17 07:21:58,164 | INFO     | fitting pss+swap vs Time
[2026-03-17 08:22:50] 2026-03-17 07:21:58,165 | INFO     | sum of square deviations: 51871856300.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,176 | INFO     | sum of deviations: -823061479783.9998
[2026-03-17 08:22:50] 2026-03-17 07:21:58,177 | INFO     | mean x: 1773715300.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,177 | INFO     | mean y: 2483039.9310344825
[2026-03-17 08:22:50] 2026-03-17 07:21:58,177 | INFO     | intersect: 28146390809.30695
[2026-03-17 08:22:50] 2026-03-17 07:21:58,178 | INFO     | chi2: 2.6069923730384184
[2026-03-17 08:22:50] 2026-03-17 07:21:58,179 | INFO     | sum of square deviations: 50472509132.5
[2026-03-17 08:22:50] 2026-03-17 07:21:58,188 | INFO     | sum of deviations: -809408217919.0001
[2026-03-17 08:22:50] 2026-03-17 07:21:58,188 | INFO     | mean x: 1773715147.5
[2026-03-17 08:22:50] 2026-03-17 07:21:58,188 | INFO     | mean y: 2484528.8754578754
[2026-03-17 08:22:50] 2026-03-17 07:21:58,188 | INFO     | intersect: 28446872202.668934
[2026-03-17 08:22:50] 2026-03-17 07:21:58,189 | INFO     | chi2: 2.593467930068546
[2026-03-17 08:22:50] 2026-03-17 07:21:58,189 | INFO     | current chi2=2.593467930068546 (change=0.5187757014459399 %)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,190 | INFO     | right removable region: 545
[2026-03-17 08:22:50] 2026-03-17 07:21:58,191 | INFO     | sum of square deviations: 50472509132.5
[2026-03-17 08:22:50] 2026-03-17 07:21:58,199 | INFO     | sum of deviations: -901831602003.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,199 | INFO     | mean x: 1773715452.5
[2026-03-17 08:22:50] 2026-03-17 07:21:58,200 | INFO     | mean y: 2491585.8571428573
[2026-03-17 08:22:50] 2026-03-17 07:21:58,200 | INFO     | intersect: 31694846008.465977
[2026-03-17 08:22:50] 2026-03-17 07:21:58,201 | INFO     | chi2: 1.0834372589984658
[2026-03-17 08:22:50] 2026-03-17 07:21:58,201 | INFO     | current chi2=1.0834372589984658 (change=58.44110361796982 %)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,202 | INFO     | sum of square deviations: 49098557790.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,210 | INFO     | sum of deviations: -895064884141.9999
[2026-03-17 08:22:50] 2026-03-17 07:21:58,210 | INFO     | mean x: 1773715605.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,211 | INFO     | mean y: 2490831.8927911273
[2026-03-17 08:22:50] 2026-03-17 07:21:58,211 | INFO     | intersect: 32337260404.56505
[2026-03-17 08:22:50] 2026-03-17 07:21:58,212 | INFO     | chi2: 1.0505495892883716
[2026-03-17 08:22:50] 2026-03-17 07:21:58,212 | INFO     | current chi2=1.0505495892883716 (change=3.0354936972073183 %)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,212 | INFO     | left removable region: 20
[2026-03-17 08:22:50] 2026-03-17 07:21:58,213 | INFO     | sum of square deviations: 44869864550.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,221 | INFO     | sum of deviations: -846847829299.9999
[2026-03-17 08:22:50] 2026-03-17 07:21:58,221 | INFO     | mean x: 1773715727.0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,221 | INFO     | mean y: 2489111.6685714284
[2026-03-17 08:22:50] 2026-03-17 07:21:58,221 | INFO     | intersect: 33478572185.89798
[2026-03-17 08:22:50] 2026-03-17 07:21:58,222 | INFO     | chi2: 1.0170385918797857
[2026-03-17 08:22:50] 2026-03-17 07:21:58,223 | INFO     | current memory leak: -18.87 B/s (using 525 data points, chi2=1.02)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,224 | INFO     | could have reported an average CPU frequency of 2199 MHz (22 samples)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,224 | INFO     | ..............................
[2026-03-17 08:22:50] 2026-03-17 07:21:58,224 | INFO     | . Timing measurements:
[2026-03-17 08:22:50] 2026-03-17 07:21:58,224 | INFO     | . get job = 0 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . initial setup = 7 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . payload setup = 7 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . stage-in = 0 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . payload execution = 33591 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . stage-out = 1 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,225 | INFO     | . log creation = 0 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,226 | INFO     | ..............................
[2026-03-17 08:22:50] 2026-03-17 07:21:58,401 | INFO     | 
[2026-03-17 08:22:50] 2026-03-17 07:21:58,401 | INFO     | job summary report
[2026-03-17 08:22:50] 2026-03-17 07:21:58,401 | INFO     | --------------------------------------------------
[2026-03-17 08:22:50] 2026-03-17 07:21:58,402 | INFO     | PanDA job id: 7046305376
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | task id: 48955010
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | errors: (none)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | pilot state: finished 
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | transexitcode: 0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,403 | INFO     | exeerrorcode: 0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,404 | INFO     | exeerrordiag: 
[2026-03-17 08:22:50] 2026-03-17 07:21:58,404 | INFO     | exitcode: 0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,404 | INFO     | exitmsg: OK
[2026-03-17 08:22:50] 2026-03-17 07:21:58,404 | INFO     | cpuconsumptiontime: 99471 s
[2026-03-17 08:22:50] 2026-03-17 07:21:58,404 | INFO     | nevents: 400
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | neventsw: 0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | pid: 495273
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | pgrp: 495273
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | corecount: 3
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | event service: False
[2026-03-17 08:22:50] 2026-03-17 07:21:58,405 | INFO     | sizes: {0: 2279699, 1: 2280216, 2: 2280244, 33603: 2320173, 33606: 2329379}
[2026-03-17 08:22:50] 2026-03-17 07:21:58,406 | INFO     | --------------------------------------------------
[2026-03-17 08:22:50] 2026-03-17 07:21:58,406 | INFO     | 
[2026-03-17 08:22:50] 2026-03-17 07:21:58,406 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-17 08:22:50] 2026-03-17 07:21:58,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,437 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 08:22:50] 2026-03-17 07:21:58,438 | INFO     | job 7046305376 has completed (purged errors)
[2026-03-17 08:22:50] 2026-03-17 07:21:58,438 | INFO     | overall cleanup function is called
[2026-03-17 08:22:50] 2026-03-17 07:21:59,448 | INFO     | --- collectZombieJob: --- 10, [495273]
[2026-03-17 08:22:50] 2026-03-17 07:21:59,448 | INFO     | zombie collector waiting for pid 495273
[2026-03-17 08:22:50] 2026-03-17 07:21:59,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 08:22:50] 2026-03-17 07:21:59,448 | INFO     | collected zombie processes
[2026-03-17 08:22:50] 2026-03-17 07:21:59,449 | INFO     | will attempt to kill all subprocesses of pid=495273
[2026-03-17 08:22:50] 2026-03-17 07:21:59,543 | INFO     | process IDs to be killed: [495273] (in reverse order)
[2026-03-17 08:22:50] 2026-03-17 07:21:59,600 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 08:22:50] 2026-03-17 07:21:59,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 08:22:50] 2026-03-17 07:21:59,604 | INFO     | did not find any defunct processes belonging to 495273
[2026-03-17 08:22:50] 2026-03-17 07:21:59,607 | INFO     | did not find any defunct processes belonging to 495273
[2026-03-17 08:22:50] 2026-03-17 07:21:59,608 | INFO     | ready for new job
[2026-03-17 08:22:50] 2026-03-17 07:21:59,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 08:22:50] 2026-03-17 07:21:59,611 | INFO     | **************************************
[2026-03-17 08:22:50] 2026-03-17 07:21:59,612 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 08:22:50] 2026-03-17 07:21:59,612 | INFO     | **************************************
[2026-03-17 08:22:50] 2026-03-17 07:21:59,612 | INFO     | 
[2026-03-17 08:22:50] 2026-03-17 07:21:59,613 | INFO     | pilot is running in a VM
[2026-03-17 08:22:50] 2026-03-17 07:21:59,613 | INFO     | architecture information:
[2026-03-17 08:22:50] 2026-03-17 07:21:59,614 | INFO     | executing command: cat /etc/os-release
[2026-03-17 08:22:50] 2026-03-17 07:21:59,633 | INFO     | cat /etc/os-release:
[2026-03-17 08:22:50] NAME="CentOS Linux"
[2026-03-17 08:22:50] VERSION="7 (Core)"
[2026-03-17 08:22:50] ID="centos"
[2026-03-17 08:22:50] ID_LIKE="rhel fedora"
[2026-03-17 08:22:50] VERSION_ID="7"
[2026-03-17 08:22:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 08:22:50] ANSI_COLOR="0;31"
[2026-03-17 08:22:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 08:22:50] HOME_URL="https://www.centos.org/"
[2026-03-17 08:22:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 08:22:50] 
[2026-03-17 08:22:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 08:22:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 08:22:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 08:22:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 08:22:50] 
[2026-03-17 08:22:50] 2026-03-17 07:21:59,634 | INFO     | **************************************
[2026-03-17 08:22:50] 2026-03-17 07:22:00,137 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-17 08:22:50] 2026-03-17 07:22:00,158 | INFO     | sufficient remaining disk space (40050360320 B)
[2026-03-17 08:22:50] 2026-03-17 07:22:00,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 08:22:50] 2026-03-17 07:22:00,158 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 08:22:50] 2026-03-17 07:22:00,159 | INFO     | update_server=False
[2026-03-17 08:22:50] 2026-03-17 07:22:00,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 08:22:50] 2026-03-17 07:22:00,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 08:22:50] 2026-03-17 07:22:00,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 08:22:50] 2026-03-17 07:22:00,364 | INFO     | all job control threads have been joined
[2026-03-17 08:22:50] 2026-03-17 07:22:00,405 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 08:22:50] 2026-03-17 07:22:00,406 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 08:22:50] 2026-03-17 07:22:00,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 08:22:50] 2026-03-17 07:22:00,408 | INFO     | will abort loop
[2026-03-17 08:22:50] 2026-03-17 07:22:00,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 08:22:50] 2026-03-17 07:22:01,140 | INFO     | all data control threads have been joined
[2026-03-17 08:22:50] 2026-03-17 07:22:01,160 | INFO     | all payload control threads have been joined
[2026-03-17 08:22:50] 2026-03-17 07:22:01,165 | INFO     | [job] retrieve thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,166 | INFO     | [job] queue monitor thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,167 | INFO     | [data] copytool_in thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,370 | INFO     | [job] control thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,410 | INFO     | [job] job monitor thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,659 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,740 | INFO     | [payload] failed_post thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:01,769 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,146 | INFO     | [data] control thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,157 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,158 | INFO     | [job] validate thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,165 | INFO     | [payload] control thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,354 | INFO     | [payload] validate_post thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:02,977 | INFO     | [data] copytool_out thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:04,167 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 08:22:50] 2026-03-17 07:22:30,676 | INFO     | PID=490894 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 08:22:50] 2026-03-17 07:22:30,677 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 08:22:50] 2026-03-17 07:22:30,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 08:22:50] 2026-03-17 07:22:30,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 08:22:50] 2026-03-17 07:22:44,029 | INFO     | [monitor] cgroup control has ended
[2026-03-17 08:22:50] 2026-03-17 07:22:45,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138381507479360)>', '<ExcThread(monitor, started 138380876699392)>']
[2026-03-17 08:22:50] 2026-03-17 07:22:45,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 08:22:50] 2026-03-17 07:22:45,750 | INFO     | [monitor] control thread has ended
[2026-03-17 08:22:50] 2026-03-17 07:22:50,280 | INFO     | all workflow threads have been joined
[2026-03-17 08:22:50] 2026-03-17 07:22:50,281 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 08:22:50] 2026-03-17 07:22:50,281 | INFO     | traces error code: 0
[2026-03-17 08:22:50] 2026-03-17 07:22:50,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 08:22:50] 2026-03-17 07:22:50,444 [wrapper] ==== pilot stdout END ====
[2026-03-17 08:22:50] 2026-03-17 07:22:50,448 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 08:22:50] 2026-03-17 07:22:50,453 [wrapper] pilotpid: 490894
[2026-03-17 08:22:50] 2026-03-17 07:22:50,457 [wrapper] Pilot exit status: 0
[2026-03-17 08:22:50] 2026-03-17 07:22:50,474 [wrapper] pandaids: 7046305376
[2026-03-17 08:22:50] 2026-03-17 07:22:50,508 [wrapper] cleanup supervisor_pilot  501333 490895
[2026-03-17 08:22:50] 2026-03-17 07:22:50,512 [wrapper] Test setup, not cleaning
[2026-03-17 08:22:50] 2026-03-17 07:22:50,517 [wrapper] apfmon messages muted
[2026-03-17 08:22:50] 2026-03-17 07:22:50,521 [wrapper] ==== wrapper stdout END ====
[2026-03-17 08:22:50] 2026-03-17 07:22:50,525 [wrapper] ==== wrapper stderr END ====
[2026-03-17 08:22:50]  *** Error codes and diagnostics ***
[2026-03-17 08:22:50]     "exeErrorCode": 0,
[2026-03-17 08:22:50]     "exeErrorDiag": "",
[2026-03-17 08:22:50]     "pilotErrorCode": 0,
[2026-03-17 08:22:50]     "pilotErrorDiag": "",
[2026-03-17 08:22:50]  *** Listing of results directory ***
[2026-03-17 08:22:50] total 622972
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc      5111 Mar 14 09:37 queuedata.json
[2026-03-17 08:22:50] -rwx------ 1 boinc boinc     36322 Mar 14 09:37 runpilot2-wrapper.sh
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc    585013 Mar 14 09:39 pilot3.tar.gz
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc       100 Mar 16 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 08:22:50] -rwxr-xr-x 1 boinc boinc      7986 Mar 16 23:01 run_atlas
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc       105 Mar 16 23:01 job.xml
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc 437678788 Mar 16 23:01 EVNT.46701403._001811.pool.root.1
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc     15845 Mar 16 23:01 start_atlas.sh
[2026-03-17 08:22:50] drwxrwx--x 2 boinc boinc      4096 Mar 16 23:01 shared
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc    597530 Mar 16 23:01 input.tar.gz
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc      6458 Mar 16 23:01 init_data.xml
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc         0 Mar 16 23:01 boinc_setup_complete
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc         0 Mar 16 23:01 boinc_lockfile
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc      2564 Mar 16 23:01 pandaJob.out
[2026-03-17 08:22:50] -rw------- 1 boinc boinc        51 Mar 16 23:01 setup.sh.local
[2026-03-17 08:22:50] -rw------- 1 boinc boinc   1006429 Mar 16 23:01 agis_schedconf.cvmfs.json
[2026-03-17 08:22:50] -rw------- 1 boinc boinc       414 Mar 16 23:01 workernode_map.json
[2026-03-17 08:22:50] drwx------ 5 boinc boinc      4096 Mar 16 23:01 pilot3
[2026-03-17 08:22:50] -rw------- 1 boinc boinc 185602543 Mar 17 08:21 HITS.48955010._039587.pool.root.1
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc       532 Mar 17 08:21 boinc_task_state.xml
[2026-03-17 08:22:50] -rw------- 1 boinc boinc      1010 Mar 17 08:21 memory_monitor_summary.json
[2026-03-17 08:22:50] -rw------- 1 boinc boinc   1511579 Mar 17 08:21 agis_ddmendpoints.agis.ALL.json
[2026-03-17 08:22:50] -rw------- 1 boinc boinc    679292 Mar 17 08:21 log.48955010._039587.job.log.tgz.1
[2026-03-17 08:22:50] -rw------- 1 boinc boinc      6292 Mar 17 08:21 heartbeat.json
[2026-03-17 08:22:50] -rw------- 1 boinc boinc        95 Mar 17 08:22 pilot_heartbeat.json
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc        29 Mar 17 08:22 wrapper_checkpoint.txt
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc      8192 Mar 17 08:22 boinc_mmap_file
[2026-03-17 08:22:50] -rw------- 1 boinc boinc      4998 Mar 17 08:22 pilotlog.txt
[2026-03-17 08:22:50] -rw------- 1 boinc boinc   4672231 Mar 17 08:22 log.48955010._039587.job.log.1
[2026-03-17 08:22:50] -rw------- 1 boinc boinc       357 Mar 17 08:22 output.list
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc       620 Mar 17 08:22 runtime_log
[2026-03-17 08:22:50] -rw------- 1 boinc boinc   5365760 Mar 17 08:22 result.tar.gz
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc      9419 Mar 17 08:22 runtime_log.err
[2026-03-17 08:22:50] -rw------- 1 boinc boinc       653 Mar 17 08:22 ckLNDmXgZL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCKsLDmMj9xDo.diag
[2026-03-17 08:22:50] -rw-r--r-- 1 boinc boinc     20918 Mar 17 08:22 stderr.txt
[2026-03-17 08:22:50] HITS file was successfully produced:
[2026-03-17 08:22:50] -rw------- 1 boinc boinc 185602543 Mar 17 08:21 shared/HITS.pool.root.1
[2026-03-17 08:22:50]  *** Contents of shared directory: ***
[2026-03-17 08:22:50] total 614528
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc 437678788 Mar 16 23:01 ATLAS.root_0
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc     15845 Mar 16 23:01 start_atlas.sh
[2026-03-17 08:22:50] -rw-r--r-- 2 boinc boinc    597530 Mar 16 23:01 input.tar.gz
[2026-03-17 08:22:50] -rw------- 1 boinc boinc 185602543 Mar 17 08:21 HITS.pool.root.1
[2026-03-17 08:22:50] -rw------- 1 boinc boinc   5365760 Mar 17 08:22 result.tar.gz
08:22:52 (486845): run_atlas exited; CPU time 99984.492801
08:22:52 (486845): called boinc_finish(0)

</stderr_txt>
]]>

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