Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-14 17:19:13 (66384): vboxwrapper version 26210
2026-03-14 17:19:13 (66384): BOINC client version: 8.2.8
2026-03-14 17:19:13 (66384): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2026-03-14 17:19:13 (66384): Detected: Sandbox Configuration Enabled
2026-03-14 17:19:14 (66384): Successfully copied 'init_data.xml' to the shared directory.
2026-03-14 17:19:14 (66384): Create VM. (boinc_eb9d5267afce75bc, slot#0)
2026-03-14 17:19:14 (66384): Setting Memory Size for VM. (4200MB)
2026-03-14 17:19:14 (66384): Setting CPU Count for VM. (2)
2026-03-14 17:19:14 (66384): Setting Chipset Options for VM.
2026-03-14 17:19:14 (66384): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-14 17:19:14 (66384): Setting Boot Options for VM.
2026-03-14 17:19:15 (66384): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-14 17:19:15 (66384): Enabling VM Network Access.
2026-03-14 17:19:15 (66384): Disabling USB Support for VM.
2026-03-14 17:19:15 (66384): Disabling COM Port Support for VM.
2026-03-14 17:19:15 (66384): Disabling Audio Support for VM.
2026-03-14 17:19:15 (66384): Disabling Clipboard Support for VM.
2026-03-14 17:19:15 (66384): Disabling Drag and Drop Support for VM.
2026-03-14 17:19:16 (66384): Adding storage controller(s) to VM.
2026-03-14 17:19:16 (66384): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-14 17:19:17 (66384): Adding VirtualBox Guest Additions to VM.
2026-03-14 17:19:17 (66384): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-14 17:19:17 (66384): forwarding host port 55987 to guest port 80
2026-03-14 17:19:17 (66384): Enabling remote desktop for VM.
2026-03-14 17:19:17 (66384): Enabling shared directory for VM.
2026-03-14 17:19:18 (66384): Starting VM using VBoxManage interface. (boinc_eb9d5267afce75bc, slot#0)
2026-03-14 17:19:29 (66384): Successfully started VM. (PID = '66464')
2026-03-14 17:19:29 (66384): Reporting VM Process ID to BOINC.
2026-03-14 17:19:29 (66384): Guest Log: BIOS: VirtualBox 7.0.14
2026-03-14 17:19:29 (66384): Guest Log: CPUID EDX: 0x178bfbff
2026-03-14 17:19:29 (66384): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-14 17:19:29 (66384): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-14 17:19:29 (66384): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-14 17:19:29 (66384): Detected: Web Application Enabled (http://localhost:55987)
2026-03-14 17:19:29 (66384): Detected: Remote Desktop Enabled (localhost:55988)
2026-03-14 17:19:29 (66384): Preference change detected
2026-03-14 17:19:29 (66384): Setting CPU throttle for VM. (100%)
2026-03-14 17:19:29 (66384): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-14 17:19:31 (66384): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-14 17:19:31 (66384): Guest Log: BIOS: Booting from Hard Disk...
2026-03-14 17:19:36 (66384): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-14 17:19:36 (66384): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-14 17:19:36 (66384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-14 17:19:46 (66384): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-14 17:19:46 (66384): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-14 17:20:01 (66384): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000228 main     Log opened 2026-03-14T11:49:59.373637000Z
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000379 main     OS Product: Linux
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000442 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000498 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000555 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000557 main     Process ID: 1269
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.000557 main     Package type: LINUX_64BITS_GENERIC
2026-03-14 17:20:01 (66384): Guest Log: 00:00:00.003269 main     5.2.32 r132073 started. Verbose level = 0
2026-03-14 17:20:01 (66384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-14 17:20:01 (66384): Guest Log: [INFO] Mounting shared directory
2026-03-14 17:20:01 (66384): Guest Log: [INFO] Checking for init_data.xml
2026-03-14 17:20:12 (66384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-14 17:20:12 (66384): Guest Log: [INFO] Detected branch: prod
2026-03-14 17:20:13 (66384): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-14 17:20:13 (66384): Guest Log: Copying input files
2026-03-14 17:20:24 (66384): Guest Log: Copied input files into RunAtlas.
2026-03-14 17:20:24 (66384): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-14 17:20:24 (66384): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-14 17:20:24 (66384): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-14 17:20:24 (66384): Guest Log: Further information can be found at the LHC@home message board.
2026-03-14 17:20:37 (66384): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-14 17:20:37 (66384): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-14 17:20:37 (66384): Guest Log: 2.6.3.0 1564 0 32116 157276 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-14 17:20:39 (66384): Guest Log: copied the webapp to /var/www
2026-03-14 17:20:39 (66384): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-14 17:20:39 (66384): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-14 17:20:39 (66384): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-14 17:20:39 (66384): Guest Log:  *** Starting ATLAS job. (PandaID=7046305021 taskID=48955010) ***
2026-03-14 18:59:30 (66384): Status Report: Elapsed Time: '6000.000000'
2026-03-14 18:59:30 (66384): Status Report: CPU Time: '10718.330000'
2026-03-14 20:39:31 (66384): Status Report: Elapsed Time: '12000.000000'
2026-03-14 20:39:31 (66384): Status Report: CPU Time: '22510.460000'
2026-03-14 22:19:31 (66384): Status Report: Elapsed Time: '18000.000000'
2026-03-14 22:19:31 (66384): Status Report: CPU Time: '34316.410000'
2026-03-14 23:02:32 (66384): Preference change detected
2026-03-14 23:02:32 (66384): Setting CPU throttle for VM. (100%)
2026-03-14 23:02:33 (66384): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-14 23:58:17 (66384): Guest Log:  *** Job finished ***
2026-03-14 23:58:17 (66384): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:27:59,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:27:59,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:05,979 | INFO     | [monitor] cgroup control has ended
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:06,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476390651712)>', '<ExcThread(monitor, started 140475931539200)>']
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:07,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:07,494 | INFO     | [monitor] control thread has ended
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,646 | INFO     | all workflow threads have been joined
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,646 | INFO     | end of generic workflow (traces error code: 0)
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,646 | INFO     | traces error code: 0
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,851 [wrapper] ==== pilot stdout END ====
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,861 [wrapper] ==== wrapper stdout RESUME ====
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,870 [wrapper] pilotpid: 5962
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:11,879 [wrapper] Pilot exit status: 0
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,316 [wrapper] pandaids: 7046305021
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,365 [wrapper] cleanup supervisor_pilot 31067 5963
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,380 [wrapper] Test setup, not cleaning
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,393 [wrapper] apfmon messages muted
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,403 [wrapper] ==== wrapper stdout END ====
2026-03-14 23:58:17 (66384): Guest Log: 2026-03-14 18:28:12,413 [wrapper] ==== wrapper stderr END ====
2026-03-14 23:58:17 (66384): Guest Log:  *** Error codes and diagnostics ***
2026-03-14 23:58:17 (66384): Guest Log:     "exeErrorCode": 0,
2026-03-14 23:58:17 (66384): Guest Log:     "exeErrorDiag": "",
2026-03-14 23:58:17 (66384): Guest Log:     "pilotErrorCode": 0,
2026-03-14 23:58:17 (66384): Guest Log:     "pilotErrorDiag": "",
2026-03-14 23:58:17 (66384): Guest Log:  *** Listing of results directory ***
2026-03-14 23:58:17 (66384): Guest Log: total 191268
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 14 08:37 queuedata.json
2026-03-14 23:58:17 (66384): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 14 08:37 runpilot2-wrapper.sh
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 14 08:39 pilot3.tar.gz
2026-03-14 23:58:17 (66384): Guest Log: -rw-r-----. 1 atlas atlas     15845 Mar 14 11:50 start_atlas.sh
2026-03-14 23:58:17 (66384): Guest Log: -rw-r-----. 1 atlas atlas    597535 Mar 14 11:50 input.tar.gz
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas      5616 Mar 14 11:50 init_data.xml
2026-03-14 23:58:17 (66384): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 14 11:50 EVNT.46701403._001807.pool.root.1 -> /data/./ATLAS.root_0
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Mar 14 11:50 pandaJob.out
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas   1004579 Mar 14 11:52 agis_schedconf.cvmfs.json
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas       427 Mar 14 11:53 workernode_map.json
2026-03-14 23:58:17 (66384): Guest Log: drwx------. 5 atlas atlas      4096 Mar 14 11:53 pilot3
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas 184637041 Mar 14 18:26 HITS.48955010._039364.pool.root.1
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas      1028 Mar 14 18:27 memory_monitor_summary.json
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 14 18:27 agis_ddmendpoints.agis.ALL.json
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas    498557 Mar 14 18:27 log.48955010._039364.job.log.tgz.1
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas      6376 Mar 14 18:27 heartbeat.json
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas        95 Mar 14 18:27 pilot_heartbeat.json
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 14 18:28 pilotlog.txt
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas   3179442 Mar 14 18:28 log.48955010._039364.job.log.1
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas       357 Mar 14 18:28 output.list
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 14 18:28 runtime_log
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas   3696640 Mar 14 18:28 result.tar.gz
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 atlas atlas      8809 Mar 14 18:28 runtime_log.err
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas       677 Mar 14 18:28 6SzKDmSgZL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm0ZpLDmLoTRAn.diag
2026-03-14 23:58:17 (66384): Guest Log: Looking for outputfile HITS.48955010._039364.pool.root.1
2026-03-14 23:58:17 (66384): Guest Log: HITS file was successfully produced
2026-03-14 23:58:17 (66384): Guest Log: -rw-------. 1 atlas atlas 184637041 Mar 14 18:26 /home/atlas/RunAtlas/HITS.48955010._039364.pool.root.1
2026-03-14 23:58:17 (66384): Guest Log: Successfully finished the ATLAS job!
2026-03-14 23:58:17 (66384): Guest Log: Copying the results back to the shared directory!
2026-03-14 23:58:17 (66384): Guest Log:  *** Contents of shared directory: ***
2026-03-14 23:58:17 (66384): Guest Log: total 434680
2026-03-14 23:58:17 (66384): Guest Log: -rw-rw----. 1 root root 440789782 Mar 14 11:49 ATLAS.root_0
2026-03-14 23:58:17 (66384): Guest Log: -rw-rw-r--. 1 root root      5616 Mar 14 11:49 init_data.xml
2026-03-14 23:58:17 (66384): Guest Log: -rw-rw----. 1 root root    597535 Mar 14 11:49 input.tar.gz
2026-03-14 23:58:17 (66384): Guest Log: -rw-r--r--. 1 root root   3696640 Mar 14  2026 result.tar.gz
2026-03-14 23:58:17 (66384): Guest Log: -rw-rw----. 1 root root     15845 Mar 14 11:49 start_atlas.sh
2026-03-14 23:58:17 (66384): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-14 23:58:18 (66384): VM Completion File Detected.
2026-03-14 23:58:18 (66384): Powering off VM.
2026-03-14 23:58:19 (66384): Successfully stopped VM.
2026-03-14 23:58:19 (66384): Deregistering VM. (boinc_eb9d5267afce75bc, slot#0)
2026-03-14 23:58:19 (66384): Removing network bandwidth throttle group from VM.
2026-03-14 23:58:19 (66384): Removing VM from VirtualBox.
2026-03-14 23:58:24 (66384): called boinc_finish(0)

</stderr_txt>
]]>

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