Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:47 (24043): wrapper (7.7.26015): starting
07:22:47 (24043): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 07:22:47] Arguments: --nthreads 12
[2026-03-14 07:22:47] Threads: 12
[2026-03-14 07:22:47] Checking for CVMFS
[2026-03-14 07:22:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 07:22:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 07:22:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 07:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 07:22:47] 2.11.2.0 2913 443136 91604 157276 2 49 18293171 20275200 1 130560 1 192195643 99.951 25894427 16968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 07:22:47] CVMFS is ok
[2026-03-14 07:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 07:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 07:22:47] Further information can be found at the LHC@home message board.
[2026-03-14 07:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 07:22:47] Checking for apptainer binary...
[2026-03-14 07:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 07:22:47] Running /usr/bin/apptainer --version
[2026-03-14 07:22:47] apptainer version 1.3.2-1.el7
[2026-03-14 07:22:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 07:22:48] c-205-6.aglt2.org
[2026-03-14 07:22:48] apptainer works
[2026-03-14 07:22:48] Set ATHENA_PROC_NUMBER=12
[2026-03-14 07:22:48] Set ATHENA_CORE_NUMBER=12
[2026-03-14 07:22:48] Starting ATLAS job with PandaID=7054483261
[2026-03-14 07:22:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 08:51:22]  *** The last 200 lines of the pilot log: ***
[2026-03-14 08:51:22]  filesize=389038
[2026-03-14 08:51:22]  filetype=log
[2026-03-14 08:51:22]  guid=df604978-1c17-4e81-8e3e-5f30619d6a37
[2026-03-14 08:51:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 08:51:22]  is_altstaged=None
[2026-03-14 08:51:22]  is_tar=False
[2026-03-14 08:51:22]  lfn=log.48967085._022969.job.log.tgz.1
[2026-03-14 08:51:22]  mtime=0
[2026-03-14 08:51:22]  protocol_id=None
[2026-03-14 08:51:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 08:51:22]  replicas=None
[2026-03-14 08:51:22]  scope=mc23_13p6TeV
[2026-03-14 08:51:22]  status=None
[2026-03-14 08:51:22]  status_code=0
[2026-03-14 08:51:22]  storage_token=
[2026-03-14 08:51:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7054483261/log.48967085._022969.job.log.tgz.1
[2026-03-14 08:51:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/5d/log.48967085._022969.job.log.tgz.1
[2026-03-14 08:51:22]  workdir=None
[2026-03-14 08:51:22] ]
[2026-03-14 08:51:22] 2026-03-14 12:50:39,007 | INFO     | transferring file log.48967085._022969.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7054483261/log.48967085._022969.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 08:51:22] 2026-03-14 12:50:39,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7054483261/log.48967085._022969.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967085._022969.job
[2026-03-14 08:51:22] 2026-03-14 12:50:39,028 | INFO     | adding to output.list: log.48967085._022969.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/73/5d/log.48967085._022969.job.log.tg
[2026-03-14 08:51:22] 2026-03-14 12:50:39,029 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 08:51:22] 2026-03-14 12:50:39,030 | INFO     | summary of transferred files:
[2026-03-14 08:51:22] 2026-03-14 12:50:39,030 | INFO     |  -- lfn=log.48967085._022969.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 08:51:22] 2026-03-14 12:50:39,030 | INFO     | stage-out finished correctly
[2026-03-14 08:51:22] 2026-03-14 12:50:39,076 | INFO     | monitor loop #398: job 0:7054483261 is in state 'finished'
[2026-03-14 08:51:22] 2026-03-14 12:50:39,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 08:51:22] 2026-03-14 12:50:39,114 | INFO     | time since job start (5251s) is within the limit (345600.0s)
[2026-03-14 08:51:22] 2026-03-14 12:50:39,962 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 08:51:22] 2026-03-14 12:50:40,800 | INFO     | job 7054483261 has state=finished
[2026-03-14 08:51:22] 2026-03-14 12:50:40,800 | INFO     | preparing for final server update for job 7054483261 in state='finished'
[2026-03-14 08:51:22] 2026-03-14 12:50:40,800 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7054483261/jobReport.json
[2026-03-14 08:51:22] 2026-03-14 12:50:40,803 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 08:51:22] 2026-03-14 12:50:40,804 | INFO     | this job has now completed (state=finished)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,804 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,804 | INFO     | log transfer has been attempted: DONE
[2026-03-14 08:51:22] 2026-03-14 12:50:40,804 | INFO     | job 7054483261 has finished - writing final server update
[2026-03-14 08:51:22] 2026-03-14 12:50:40,805 | INFO     | total number of processed events: 400 (read)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,807 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7054483261/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,808 | INFO     | extracted standard info from prmon json
[2026-03-14 08:51:22] 2026-03-14 12:50:40,808 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 08:51:22] 2026-03-14 12:50:40,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 08:51:22] 2026-03-14 12:50:40,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 08:51:22] 2026-03-14 12:50:40,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 08:51:22] 2026-03-14 12:50:40,810 | INFO     | fitting pss+swap vs Time
[2026-03-14 08:51:22] 2026-03-14 12:50:40,811 | INFO     | sum of square deviations: 152858680.0
[2026-03-14 08:51:22] 2026-03-14 12:50:40,811 | INFO     | sum of deviations: -10660043898.0
[2026-03-14 08:51:22] 2026-03-14 12:50:40,811 | INFO     | mean x: 1773490096.0
[2026-03-14 08:51:22] 2026-03-14 12:50:40,811 | INFO     | mean y: 2791339.405063291
[2026-03-14 08:51:22] 2026-03-14 12:50:40,812 | INFO     | intersect: 123682272779.5708
[2026-03-14 08:51:22] 2026-03-14 12:50:40,812 | INFO     | chi2: 0.09577756309590524
[2026-03-14 08:51:22] 2026-03-14 12:50:40,812 | INFO     | current memory leak: -69.74 B/s (using 79 data points, chi2=0.10)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,812 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-14 08:51:22] 2026-03-14 12:50:40,812 | INFO     | ..............................
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . Timing measurements:
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . get job = 0 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . initial setup = 7 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . payload setup = 7 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . stage-in = 0 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . payload execution = 5228 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . stage-out = 0 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | . log creation = 0 s
[2026-03-14 08:51:22] 2026-03-14 12:50:40,813 | INFO     | ..............................
[2026-03-14 08:51:22] 2026-03-14 12:50:41,119 | INFO     | time since job start (5253s) is within the limit (345600.0s)
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | 
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | job summary report
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | --------------------------------------------------
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | PanDA job id: 7054483261
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | task id: 48967085
[2026-03-14 08:51:22] 2026-03-14 12:50:41,232 | INFO     | errors: (none)
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | pilot state: finished 
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | transexitcode: 0
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | exeerrorcode: 0
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | exeerrordiag: 
[2026-03-14 08:51:22] 2026-03-14 12:50:41,233 | INFO     | exitcode: 0
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | exitmsg: OK
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | cpuconsumptiontime: 57370 s
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | nevents: 400
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | neventsw: 0
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | pid: 32141
[2026-03-14 08:51:22] 2026-03-14 12:50:41,234 | INFO     | pgrp: 32141
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | corecount: 12
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | event service: False
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | sizes: {0: 2279809, 1: 2280270, 12: 2280270, 5238: 2306731, 5239: 2315729, 5240: 2315785, 5241: 2316107}
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | --------------------------------------------------
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | 
[2026-03-14 08:51:22] 2026-03-14 12:50:41,235 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 08:51:22] 2026-03-14 12:50:41,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,263 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 08:51:22] 2026-03-14 12:50:41,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,264 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 08:51:22] 2026-03-14 12:50:41,264 | INFO     | job 7054483261 has completed (purged errors)
[2026-03-14 08:51:22] 2026-03-14 12:50:41,264 | INFO     | overall cleanup function is called
[2026-03-14 08:51:22] 2026-03-14 12:50:42,272 | INFO     | --- collectZombieJob: --- 10, [32141]
[2026-03-14 08:51:22] 2026-03-14 12:50:42,273 | INFO     | zombie collector waiting for pid 32141
[2026-03-14 08:51:22] 2026-03-14 12:50:42,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 08:51:22] 2026-03-14 12:50:42,305 | INFO     | collected zombie processes
[2026-03-14 08:51:22] 2026-03-14 12:50:42,305 | INFO     | will attempt to kill all subprocesses of pid=32141
[2026-03-14 08:51:22] 2026-03-14 12:50:42,393 | INFO     | process IDs to be killed: [32141] (in reverse order)
[2026-03-14 08:51:22] 2026-03-14 12:50:42,445 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 08:51:22] 2026-03-14 12:50:42,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 08:51:22] 2026-03-14 12:50:42,449 | INFO     | did not find any defunct processes belonging to 32141
[2026-03-14 08:51:22] 2026-03-14 12:50:42,451 | INFO     | did not find any defunct processes belonging to 32141
[2026-03-14 08:51:22] 2026-03-14 12:50:42,451 | INFO     | ready for new job
[2026-03-14 08:51:22] 2026-03-14 12:50:42,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 08:51:22] 2026-03-14 12:50:42,453 | INFO     | **************************************
[2026-03-14 08:51:22] 2026-03-14 12:50:42,453 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 08:51:22] 2026-03-14 12:50:42,453 | INFO     | **************************************
[2026-03-14 08:51:22] 2026-03-14 12:50:42,453 | INFO     | 
[2026-03-14 08:51:22] 2026-03-14 12:50:42,453 | INFO     | architecture information:
[2026-03-14 08:51:22] 2026-03-14 12:50:42,454 | INFO     | executing command: cat /etc/os-release
[2026-03-14 08:51:22] 2026-03-14 12:50:42,469 | INFO     | cat /etc/os-release:
[2026-03-14 08:51:22] NAME="CentOS Linux"
[2026-03-14 08:51:22] VERSION="7 (Core)"
[2026-03-14 08:51:22] ID="centos"
[2026-03-14 08:51:22] ID_LIKE="rhel fedora"
[2026-03-14 08:51:22] VERSION_ID="7"
[2026-03-14 08:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 08:51:22] ANSI_COLOR="0;31"
[2026-03-14 08:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 08:51:22] HOME_URL="https://www.centos.org/"
[2026-03-14 08:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 08:51:22] 
[2026-03-14 08:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 08:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 08:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 08:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 08:51:22] 
[2026-03-14 08:51:22] 2026-03-14 12:50:42,470 | INFO     | **************************************
[2026-03-14 08:51:22] 2026-03-14 12:50:42,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 08:51:22] 2026-03-14 12:50:42,989 | INFO     | sufficient remaining disk space (29336010752 B)
[2026-03-14 08:51:22] 2026-03-14 12:50:42,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 08:51:22] 2026-03-14 12:50:42,990 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 08:51:22] 2026-03-14 12:50:42,990 | INFO     | update_server=False
[2026-03-14 08:51:22] 2026-03-14 12:50:42,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 08:51:22] 2026-03-14 12:50:42,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:51:22] 2026-03-14 12:50:42,991 | INFO     | aborting loop
[2026-03-14 08:51:22] 2026-03-14 12:50:42,991 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 08:51:22] 2026-03-14 12:50:42,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 08:51:22] 2026-03-14 12:50:42,991 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 08:51:22] 2026-03-14 12:50:42,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 08:51:22] 2026-03-14 12:50:42,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 08:51:22] 2026-03-14 12:50:43,780 | INFO     | all job control threads have been joined
[2026-03-14 08:51:22] 2026-03-14 12:50:43,800 | INFO     | all data control threads have been joined
[2026-03-14 08:51:22] 2026-03-14 12:50:43,996 | INFO     | [job] retrieve thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:43,996 | INFO     | [job] job monitor thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,154 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,266 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,440 | INFO     | all payload control threads have been joined
[2026-03-14 08:51:22] 2026-03-14 12:50:44,467 | INFO     | [data] copytool_in thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,693 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,785 | INFO     | [job] control thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,806 | INFO     | [data] control thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,826 | INFO     | [payload] failed_post thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:44,992 | INFO     | [data] copytool_out thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:45,049 | INFO     | [job] validate thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:45,397 | INFO     | [payload] validate_post thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:45,446 | INFO     | [payload] control thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:45,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 08:51:22] 2026-03-14 12:50:46,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 08:51:22] 2026-03-14 12:50:46,903 | INFO     | [job] queue monitor thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:50,053 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:50:53,123 | INFO     | job.realtimelogging is not enabled
[2026-03-14 08:51:22] 2026-03-14 12:50:54,128 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 08:51:22] 2026-03-14 12:51:16,127 | INFO     | [monitor] cgroup control has ended
[2026-03-14 08:51:22] 2026-03-14 12:51:17,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504778626880)>', '<ExcThread(monitor, started 140503613961984)>']
[2026-03-14 08:51:22] 2026-03-14 12:51:18,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 08:51:22] 2026-03-14 12:51:18,147 | INFO     | [monitor] control thread has ended
[2026-03-14 08:51:22] 2026-03-14 12:51:22,282 | INFO     | all workflow threads have been joined
[2026-03-14 08:51:22] 2026-03-14 12:51:22,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 08:51:22] 2026-03-14 12:51:22,289 | INFO     | traces error code: 0
[2026-03-14 08:51:22] 2026-03-14 12:51:22,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 08:51:22] 2026-03-14 12:51:22,382 [wrapper] ==== pilot stdout END ====
[2026-03-14 08:51:22] 2026-03-14 12:51:22,385 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 08:51:22] 2026-03-14 12:51:22,389 [wrapper] pilotpid: 27720
[2026-03-14 08:51:22] 2026-03-14 12:51:22,392 [wrapper] Pilot exit status: 0
[2026-03-14 08:51:22] 2026-03-14 12:51:22,406 [wrapper] pandaids: 7054483261
[2026-03-14 08:51:22] 2026-03-14 12:51:22,446 [wrapper] cleanup supervisor_pilot 21923 27721
[2026-03-14 08:51:22] 2026-03-14 12:51:22,450 [wrapper] Test setup, not cleaning
[2026-03-14 08:51:22] 2026-03-14 12:51:22,454 [wrapper] apfmon messages muted
[2026-03-14 08:51:22] 2026-03-14 12:51:22,457 [wrapper] ==== wrapper stdout END ====
[2026-03-14 08:51:22] 2026-03-14 12:51:22,461 [wrapper] ==== wrapper stderr END ====
[2026-03-14 08:51:22]  *** Error codes and diagnostics ***
[2026-03-14 08:51:22]     "exeErrorCode": 0,
[2026-03-14 08:51:22]     "exeErrorDiag": "",
[2026-03-14 08:51:22]     "pilotErrorCode": 0,
[2026-03-14 08:51:22]     "pilotErrorDiag": "",
[2026-03-14 08:51:22]  *** Listing of results directory ***
[2026-03-14 08:51:22] total 412216
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 04:35 pilot3.tar.gz
[2026-03-14 08:51:22] -rwx------ 1 boincer umatlas     36322 Mar 14 04:37 runpilot2-wrapper.sh
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 04:37 queuedata.json
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas       100 Mar 14 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 08:51:22] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 07:22 run_atlas
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas       105 Mar 14 07:22 job.xml
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas 213762246 Mar 14 07:22 EVNT.48967083._000927.pool.root.1
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 07:22 start_atlas.sh
[2026-03-14 08:51:22] drwxrwx--x 2 boincer umatlas      4096 Mar 14 07:22 shared
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 07:22 input.tar.gz
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas         0 Mar 14 07:22 boinc_lockfile
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas      2563 Mar 14 07:22 pandaJob.out
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas        57 Mar 14 07:22 setup.sh.local
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas   1004579 Mar 14 07:23 agis_schedconf.cvmfs.json
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas   1511579 Mar 14 07:23 agis_ddmendpoints.agis.ALL.json
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas       444 Mar 14 07:23 workernode_map.json
[2026-03-14 08:51:22] drwx------ 5 boincer umatlas      4096 Mar 14 07:23 pilot3
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 08:46 init_data.xml
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas 202114876 Mar 14 08:50 HITS.48967085._022969.pool.root.1
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas        95 Mar 14 08:50 pilot_heartbeat.json
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas       529 Mar 14 08:50 boinc_task_state.xml
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas      1045 Mar 14 08:50 memory_monitor_summary.json
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas    389038 Mar 14 08:50 log.48967085._022969.job.log.tgz.1
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas      6421 Mar 14 08:50 heartbeat.json
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 08:50 boinc_mmap_file
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas        27 Mar 14 08:50 wrapper_checkpoint.txt
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas      4620 Mar 14 08:51 pilotlog.txt
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas    756221 Mar 14 08:51 log.48967085._022969.job.log.1
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas       357 Mar 14 08:51 output.list
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas       620 Mar 14 08:51 runtime_log
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas   1167360 Mar 14 08:51 result.tar.gz
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas       658 Mar 14 08:51 zErNDmxfZL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2DsLDmZhdTem.diag
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 08:51 runtime_log.err
[2026-03-14 08:51:22] -rw-r--r-- 1 boincer umatlas     21115 Mar 14 08:51 stderr.txt
[2026-03-14 08:51:22] HITS file was successfully produced:
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas 202114876 Mar 14 08:50 shared/HITS.pool.root.1
[2026-03-14 08:51:22]  *** Contents of shared directory: ***
[2026-03-14 08:51:22] total 407880
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas 213762246 Mar 14 07:22 ATLAS.root_0
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 07:22 start_atlas.sh
[2026-03-14 08:51:22] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 07:22 input.tar.gz
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas 202114876 Mar 14 08:50 HITS.pool.root.1
[2026-03-14 08:51:22] -rw------- 1 boincer umatlas   1167360 Mar 14 08:51 result.tar.gz
08:51:23 (24043): run_atlas exited; CPU time 57356.069652
08:51:23 (24043): called boinc_finish(0)

</stderr_txt>
]]>

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