Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:57:17 (1684717): wrapper (7.7.26015): starting
02:57:17 (1684717): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 02:57:17] Arguments: --nthreads 4
[2026-03-19 02:57:17] Threads: 4
[2026-03-19 02:57:17] Checking for CVMFS
[2026-03-19 02:57:17] No cvmfs_config command found, will try listing directly
[2026-03-19 02:57:17] CVMFS is ok
[2026-03-19 02:57:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 02:57:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 02:57:17] Further information can be found at the LHC@home message board.
[2026-03-19 02:57:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 02:57:17] Checking for apptainer binary...
[2026-03-19 02:57:17] which: no apptainer in ((null))
[2026-03-19 02:57:17] apptainer is not installed, using version from CVMFS
[2026-03-19 02:57:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 02:57:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-19 02:57:17] apptainer works
[2026-03-19 02:57:17] Set ATHENA_PROC_NUMBER=4
[2026-03-19 02:57:17] Set ATHENA_CORE_NUMBER=4
[2026-03-19 02:57:17] Starting ATLAS job with PandaID=7045583400
[2026-03-19 02:57:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 05:46:10]  *** The last 200 lines of the pilot log: ***
[2026-03-19 05:46:10] 2026-03-19 04:41:02,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,326 | INFO     | job 7045583400 has state=finished
[2026-03-19 05:46:10] 2026-03-19 04:41:02,326 | INFO     | preparing for final server update for job 7045583400 in state='finished'
[2026-03-19 05:46:10] 2026-03-19 04:41:02,327 | INFO     | reading metadata from: /var/lib/boinc/var/slot52/slots/1/PanDA_Pilot-7045583400/jobReport.json
[2026-03-19 05:46:10] 2026-03-19 04:41:02,329 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot52/slots/1/workernode_map.json
[2026-03-19 05:46:10] 2026-03-19 04:41:02,330 | INFO     | this job has now completed (state=finished)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,330 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,330 | INFO     | log transfer has been attempted: DONE
[2026-03-19 05:46:10] 2026-03-19 04:41:02,330 | INFO     | job 7045583400 has finished - writing final server update
[2026-03-19 05:46:10] 2026-03-19 04:41:02,331 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2666361/.job.ad'
[2026-03-19 05:46:10] 2026-03-19 04:41:02,331 | INFO     | total number of processed events: 400 (read)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,360 | INFO     | using path: /var/lib/boinc/var/slot52/slots/1/PanDA_Pilot-7045583400/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,361 | INFO     | extracted standard info from prmon json
[2026-03-19 05:46:10] 2026-03-19 04:41:02,361 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 05:46:10] 2026-03-19 04:41:02,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 05:46:10] 2026-03-19 04:41:02,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 05:46:10] 2026-03-19 04:41:02,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 05:46:10] 2026-03-19 04:41:02,365 | INFO     | fitting pss+swap vs Time
[2026-03-19 05:46:10] 2026-03-19 04:41:02,365 | INFO     | sum of square deviations: 1270051720.0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,370 | INFO     | sum of deviations: 25563832938.499996
[2026-03-19 05:46:10] 2026-03-19 04:41:02,370 | INFO     | mean x: 1773890352.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,370 | INFO     | mean y: 2299942.11875
[2026-03-19 05:46:10] 2026-03-19 04:41:02,371 | INFO     | intersect: -35702888995.0112
[2026-03-19 05:46:10] 2026-03-19 04:41:02,371 | INFO     | chi2: 1.479864293835706
[2026-03-19 05:46:10] 2026-03-19 04:41:02,371 | INFO     | sum of square deviations: 1154663510.0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,372 | INFO     | sum of deviations: 24692926635.999996
[2026-03-19 05:46:10] 2026-03-19 04:41:02,372 | INFO     | mean x: 1773890200.0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,372 | INFO     | mean y: 2298790.735483871
[2026-03-19 05:46:10] 2026-03-19 04:41:02,373 | INFO     | intersect: -37933030584.07031
[2026-03-19 05:46:10] 2026-03-19 04:41:02,373 | INFO     | chi2: 1.480838161620127
[2026-03-19 05:46:10] 2026-03-19 04:41:02,373 | INFO     | current chi2=1.480838161620127 (change=-0.06580791147387445 %)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,373 | INFO     | right removable region: 154
[2026-03-19 05:46:10] 2026-03-19 04:41:02,373 | INFO     | sum of square deviations: 1154663510.0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,374 | INFO     | sum of deviations: 2672171306.9999995
[2026-03-19 05:46:10] 2026-03-19 04:41:02,374 | INFO     | mean x: 1773890505.0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,374 | INFO     | mean y: 2329766.8387096776
[2026-03-19 05:46:10] 2026-03-19 04:41:02,375 | INFO     | intersect: -4102882936.4022017
[2026-03-19 05:46:10] 2026-03-19 04:41:02,375 | INFO     | chi2: 0.001822424982697415
[2026-03-19 05:46:10] 2026-03-19 04:41:02,375 | INFO     | current chi2=0.001822424982697415 (change=99.87685188498104 %)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,375 | INFO     | sum of square deviations: 1046484737.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,376 | INFO     | sum of deviations: 2676469732.9999995
[2026-03-19 05:46:10] 2026-03-19 04:41:02,376 | INFO     | mean x: 1773890657.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,376 | INFO     | mean y: 2329754.6
[2026-03-19 05:46:10] 2026-03-19 04:41:02,377 | INFO     | intersect: -4534539713.5514345
[2026-03-19 05:46:10] 2026-03-19 04:41:02,377 | INFO     | chi2: 0.0016034042718398001
[2026-03-19 05:46:10] 2026-03-19 04:41:02,377 | INFO     | current chi2=0.0016034042718398001 (change=12.018091989357885 %)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,377 | INFO     | left removable region: 20
[2026-03-19 05:46:10] 2026-03-19 04:41:02,377 | INFO     | sum of square deviations: 746051197.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,378 | INFO     | sum of deviations: 2793239501.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,378 | INFO     | mean x: 1773890779.5
[2026-03-19 05:46:10] 2026-03-19 04:41:02,378 | INFO     | mean y: 2329061.813432836
[2026-03-19 05:46:10] 2026-03-19 04:41:02,379 | INFO     | intersect: -6639174648.990579
[2026-03-19 05:46:10] 2026-03-19 04:41:02,379 | INFO     | chi2: 0.00047642955688905364
[2026-03-19 05:46:10] 2026-03-19 04:41:02,379 | INFO     | current memory leak: 3.74 B/s (using 134 data points, chi2=0.00)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,379 | INFO     | could have reported an average CPU frequency of 2723 MHz (9 samples)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | ..............................
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . Timing measurements:
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . get job = 0 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . initial setup = 9 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . payload setup = 18 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . stage-in = 0 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . payload execution = 9759 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . stage-out = 1 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,380 | INFO     | . log creation = 0 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,381 | INFO     | ..............................
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | 
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | job summary report
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | --------------------------------------------------
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | PanDA job id: 7045583400
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | task id: 48955010
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | errors: (none)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,581 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | pilot state: finished 
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | transexitcode: 0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | exeerrorcode: 0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | exeerrordiag: 
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | exitcode: 0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | exitmsg: OK
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | cpuconsumptiontime: 36785 s
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | nevents: 400
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | neventsw: 0
[2026-03-19 05:46:10] 2026-03-19 04:41:02,582 | INFO     | pid: 1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | pgrp: 1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | corecount: 4
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | event service: False
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | sizes: {0: 2279757, 1: 2280218, 11: 2280218, 9782: 2309026, 9784: 2318046, 9787: 2318488}
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | --------------------------------------------------
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | 
[2026-03-19 05:46:10] 2026-03-19 04:41:02,583 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/1
[2026-03-19 05:46:10] 2026-03-19 04:41:02,628 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,628 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,628 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 05:46:10] 2026-03-19 04:41:02,630 | INFO     | job 7045583400 has completed (purged errors)
[2026-03-19 05:46:10] 2026-03-19 04:41:02,631 | INFO     | overall cleanup function is called
[2026-03-19 05:46:10] 2026-03-19 04:41:03,640 | INFO     | --- collectZombieJob: --- 10, [1702980]
[2026-03-19 05:46:10] 2026-03-19 04:41:03,641 | INFO     | zombie collector waiting for pid 1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:03,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 05:46:10] 2026-03-19 04:41:03,641 | INFO     | collected zombie processes
[2026-03-19 05:46:10] 2026-03-19 04:41:03,641 | INFO     | will attempt to kill all subprocesses of pid=1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:04,568 | INFO     | process IDs to be killed: [1702980] (in reverse order)
[2026-03-19 05:46:10] 2026-03-19 04:41:04,950 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 05:46:10] 2026-03-19 04:41:04,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 05:46:10] 2026-03-19 04:41:04,986 | INFO     | did not find any defunct processes belonging to 1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:05,016 | INFO     | did not find any defunct processes belonging to 1702980
[2026-03-19 05:46:10] 2026-03-19 04:41:05,017 | INFO     | ready for new job
[2026-03-19 05:46:10] 2026-03-19 04:41:05,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 05:46:10] 2026-03-19 04:41:05,019 | INFO     | **************************************
[2026-03-19 05:46:10] 2026-03-19 04:41:05,019 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 05:46:10] 2026-03-19 04:41:05,019 | INFO     | **************************************
[2026-03-19 05:46:10] 2026-03-19 04:41:05,020 | INFO     | 
[2026-03-19 05:46:10] 2026-03-19 04:41:05,029 | INFO     | architecture information:
[2026-03-19 05:46:10] 2026-03-19 04:41:05,029 | INFO     | executing command: cat /etc/os-release
[2026-03-19 05:46:10] 2026-03-19 04:41:05,064 | INFO     | cat /etc/os-release:
[2026-03-19 05:46:10] NAME="CentOS Linux"
[2026-03-19 05:46:10] VERSION="7 (Core)"
[2026-03-19 05:46:10] ID="centos"
[2026-03-19 05:46:10] ID_LIKE="rhel fedora"
[2026-03-19 05:46:10] VERSION_ID="7"
[2026-03-19 05:46:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 05:46:10] ANSI_COLOR="0;31"
[2026-03-19 05:46:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 05:46:10] HOME_URL="https://www.centos.org/"
[2026-03-19 05:46:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 05:46:10] 
[2026-03-19 05:46:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 05:46:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 05:46:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 05:46:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 05:46:10] 
[2026-03-19 05:46:10] 2026-03-19 04:41:05,065 | INFO     | **************************************
[2026-03-19 05:46:10] 2026-03-19 04:41:05,568 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/1
[2026-03-19 05:46:10] 2026-03-19 04:41:05,597 | INFO     | sufficient remaining disk space (165446418432 B)
[2026-03-19 05:46:10] 2026-03-19 04:41:05,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 05:46:10] 2026-03-19 04:41:05,598 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 05:46:10] 2026-03-19 04:41:05,598 | INFO     | update_server=False
[2026-03-19 05:46:10] 2026-03-19 04:41:05,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 05:46:10] 2026-03-19 04:41:05,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 05:46:10] 2026-03-19 04:41:05,761 | INFO     | aborting loop
[2026-03-19 05:46:10] 2026-03-19 04:41:05,809 | INFO     | all job control threads have been joined
[2026-03-19 05:46:10] 2026-03-19 04:41:05,941 | INFO     | all payload control threads have been joined
[2026-03-19 05:46:10] 2026-03-19 04:41:05,948 | INFO     | all data control threads have been joined
[2026-03-19 05:46:10] 2026-03-19 04:41:06,604 | INFO     | [job] retrieve thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,708 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,766 | INFO     | [job] job monitor thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,815 | INFO     | [job] control thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 05:46:10] 2026-03-19 04:41:06,947 | INFO     | [payload] control thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,954 | INFO     | [data] control thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:06,997 | INFO     | [data] copytool_in thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,299 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,315 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,330 | INFO     | [job] validate thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,474 | INFO     | [payload] failed_post thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 05:46:10] 2026-03-19 04:41:07,798 | INFO     | [payload] validate_post thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,807 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:07,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 05:46:10] 2026-03-19 04:41:08,497 | INFO     | [job] queue monitor thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:08,842 | INFO     | [data] copytool_out thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:11,999 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 05:46:10] 2026-03-19 04:41:36,303 | INFO     | PID=1692748 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-19 05:46:10] 2026-03-19 04:41:36,303 | INFO     | .. there are 22 such processes running
[2026-03-19 05:46:10] 2026-03-19 04:41:36,303 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 05:46:10] 2026-03-19 04:41:36,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 05:46:10] 2026-03-19 04:41:36,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 05:46:10] 2026-03-19 04:41:59,884 | INFO     | [monitor] cgroup control has ended
[2026-03-19 05:46:10] 2026-03-19 04:42:01,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23161439041344)>', '<ExcThread(monitor, started 23161201768192)>']
[2026-03-19 05:46:10] 2026-03-19 04:42:01,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 05:46:10] 2026-03-19 04:42:01,430 | INFO     | [monitor] control thread has ended
[2026-03-19 05:46:10] 2026-03-19 04:42:06,131 | INFO     | all workflow threads have been joined
[2026-03-19 05:46:10] 2026-03-19 04:42:06,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 05:46:10] 2026-03-19 04:42:06,132 | INFO     | traces error code: 0
[2026-03-19 05:46:10] 2026-03-19 04:42:06,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 05:46:10] 2026-03-19 04:42:06,424 [wrapper] ==== pilot stdout END ====
[2026-03-19 05:46:10] 2026-03-19 04:42:06,428 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 05:46:10] 2026-03-19 04:42:06,432 [wrapper] pilotpid: 1692748
[2026-03-19 05:46:10] 2026-03-19 04:42:06,436 [wrapper] Pilot exit status: 0
[2026-03-19 05:46:10] 2026-03-19 04:42:06,460 [wrapper] pandaids: 7045583400
[2026-03-19 05:46:10] 2026-03-19 04:42:06,693 [wrapper] cleanup supervisor_pilot 2047225 1692750
[2026-03-19 05:46:10] 2026-03-19 04:42:06,697 [wrapper] Test setup, not cleaning
[2026-03-19 05:46:10] 2026-03-19 04:42:06,701 [wrapper] apfmon messages muted
[2026-03-19 05:46:10] 2026-03-19 04:42:06,706 [wrapper] ==== wrapper stdout END ====
[2026-03-19 05:46:10] 2026-03-19 04:42:06,710 [wrapper] ==== wrapper stderr END ====
[2026-03-19 05:46:10]  *** Error codes and diagnostics ***
[2026-03-19 05:46:10]     "exeErrorCode": 0,
[2026-03-19 05:46:10]     "exeErrorDiag": "",
[2026-03-19 05:46:10]     "pilotErrorCode": 0,
[2026-03-19 05:46:10]     "pilotErrorDiag": "",
[2026-03-19 05:46:10]  *** Listing of results directory ***
[2026-03-19 05:46:10] total 616236
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc      5111 Mar 14 02:49 queuedata.json
[2026-03-19 05:46:10] -rwx------. 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc       100 Mar 19 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 05:46:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 02:57 run_atlas
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc       105 Mar 19 02:57 job.xml
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc      6622 Mar 19 02:57 init_data.xml
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc 438218433 Mar 19 02:57 EVNT.46701403._001766.pool.root.1
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc    597528 Mar 19 02:57 input.tar.gz
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:57 start_atlas.sh
[2026-03-19 05:46:10] drwxrwx--x. 2 boinc boinc      4096 Mar 19 02:57 shared
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc         0 Mar 19 02:57 boinc_lockfile
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc      2563 Mar 19 02:57 pandaJob.out
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc   1010446 Mar 19 02:57 agis_schedconf.cvmfs.json
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc   1511579 Mar 19 02:57 agis_ddmendpoints.agis.ALL.json
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc       439 Mar 19 02:57 workernode_map.json
[2026-03-19 05:46:10] drwx------. 5 boinc boinc      4096 Mar 19 02:57 pilot3
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc       529 Mar 19 05:40 boinc_task_state.xml
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc 185506974 Mar 19 05:40 HITS.48955010._037189.pool.root.1
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc        95 Mar 19 05:40 pilot_heartbeat.json
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc      1025 Mar 19 05:40 memory_monitor_summary.json
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc    342380 Mar 19 05:40 log.48955010._037189.job.log.tgz.1
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc      6347 Mar 19 05:41 heartbeat.json
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc      4831 Mar 19 05:42 pilotlog.txt
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc   1336829 Mar 19 05:42 log.48955010._037189.job.log.1
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc       357 Mar 19 05:42 output.list
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc       620 Mar 19 05:42 runtime_log
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc   1699840 Mar 19 05:42 result.tar.gz
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc      9204 Mar 19 05:42 runtime_log.err
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc       664 Mar 19 05:42 IIbNDm6ITL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvarLDmxQF22m.diag
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc        27 Mar 19 05:45 wrapper_checkpoint.txt
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc      8192 Mar 19 05:46 boinc_mmap_file
[2026-03-19 05:46:10] -rw-r--r--. 1 boinc boinc     21133 Mar 19 05:46 stderr.txt
[2026-03-19 05:46:10] HITS file was successfully produced:
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc 185506974 Mar 19 05:40 shared/HITS.pool.root.1
[2026-03-19 05:46:10]  *** Contents of shared directory: ***
[2026-03-19 05:46:10] total 611376
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc 438218433 Mar 19 02:57 ATLAS.root_0
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc    597528 Mar 19 02:57 input.tar.gz
[2026-03-19 05:46:10] -rw-r--r--. 2 boinc boinc     15845 Mar 19 02:57 start_atlas.sh
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc 185506974 Mar 19 05:40 HITS.pool.root.1
[2026-03-19 05:46:10] -rw-------. 1 boinc boinc   1699840 Mar 19 05:42 result.tar.gz
05:46:12 (1684717): run_atlas exited; CPU time 37406.297948
05:46:12 (1684717): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN