Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:12:46 (1261701): wrapper (7.7.26015): starting
03:12:46 (1261701): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 03:12:46] Arguments: --nthreads 12
[2026-03-14 03:12:46] Threads: 12
[2026-03-14 03:12:46] Checking for CVMFS
[2026-03-14 03:12:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 03:12:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 03:12:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 03:12:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 03:12:47] 2.13.3.0 8127 36712 226216 157269 3 195 28968259 40960000 55628 16776704 0 358270331 99.768 208908844 37904 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 03:12:47] CVMFS is ok
[2026-03-14 03:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 03:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 03:12:47] Further information can be found at the LHC@home message board.
[2026-03-14 03:12:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:12:47] Checking for apptainer binary...
[2026-03-14 03:12:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 03:12:47] Running /usr/bin/apptainer --version
[2026-03-14 03:12:47] apptainer version 1.4.5-2.el9
[2026-03-14 03:12:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:12:47] c8-6-11.aglt2.org
[2026-03-14 03:12:47] apptainer works
[2026-03-14 03:12:47] Set ATHENA_PROC_NUMBER=12
[2026-03-14 03:12:47] Set ATHENA_CORE_NUMBER=12
[2026-03-14 03:12:47] Starting ATLAS job with PandaID=7045583358
[2026-03-14 03:12:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 03:47:09]  *** The last 200 lines of the pilot log: ***
[2026-03-14 03:47:09]  lfn=log.48955010._037147.job.log.tgz.1
[2026-03-14 03:47:09]  mtime=0
[2026-03-14 03:47:09]  protocol_id=None
[2026-03-14 03:47:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 03:47:09]  replicas=None
[2026-03-14 03:47:09]  scope=mc23_13p6TeV
[2026-03-14 03:47:09]  status=None
[2026-03-14 03:47:09]  status_code=0
[2026-03-14 03:47:09]  storage_token=
[2026-03-14 03:47:09]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-7045583358/log.48955010._037147.job.log.tgz.1
[2026-03-14 03:47:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/e1/log.48955010._037147.job.log.tgz.1
[2026-03-14 03:47:09]  workdir=None
[2026-03-14 03:47:09] ]
[2026-03-14 03:47:09] 2026-03-14 07:46:31,335 | INFO     | transferring file log.48955010._037147.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-7045583358/log.48955010._037147.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 03:47:09] 2026-03-14 07:46:31,336 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-7045583358/log.48955010._037147.job.log.tgz.1 /tmp/boinchome/slots/6/log.48955010._037147.job
[2026-03-14 03:47:09] 2026-03-14 07:46:31,351 | INFO     | adding to output.list: log.48955010._037147.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/e1/log.48955010._037147.job.log.tg
[2026-03-14 03:47:09] 2026-03-14 07:46:31,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 03:47:09] 2026-03-14 07:46:31,352 | INFO     | summary of transferred files:
[2026-03-14 03:47:09] 2026-03-14 07:46:31,352 | INFO     |  -- lfn=log.48955010._037147.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 03:47:09] 2026-03-14 07:46:31,352 | INFO     | stage-out finished correctly
[2026-03-14 03:47:09] 2026-03-14 07:46:31,913 | INFO     | time since job start (2013s) is within the limit (345600.0s)
[2026-03-14 03:47:09] 2026-03-14 07:46:33,920 | INFO     | time since job start (2015s) is within the limit (345600.0s)
[2026-03-14 03:47:09] 2026-03-14 07:46:34,535 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 03:47:09] 2026-03-14 07:46:35,924 | INFO     | time since job start (2017s) is within the limit (345600.0s)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,354 | INFO     | job 7045583358 has state=finished
[2026-03-14 03:47:09] 2026-03-14 07:46:36,356 | INFO     | preparing for final server update for job 7045583358 in state='finished'
[2026-03-14 03:47:09] 2026-03-14 07:46:36,356 | INFO     | reading metadata from: /tmp/boinchome/slots/6/PanDA_Pilot-7045583358/jobReport.json
[2026-03-14 03:47:09] 2026-03-14 07:46:36,358 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/6/workernode_map.json
[2026-03-14 03:47:09] 2026-03-14 07:46:36,358 | INFO     | this job has now completed (state=finished)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,358 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,359 | INFO     | log transfer has been attempted: DONE
[2026-03-14 03:47:09] 2026-03-14 07:46:36,359 | INFO     | job 7045583358 has finished - writing final server update
[2026-03-14 03:47:09] 2026-03-14 07:46:36,359 | INFO     | total number of processed events: 400 (read)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,375 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-7045583358/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,375 | INFO     | extracted standard info from prmon json
[2026-03-14 03:47:09] 2026-03-14 07:46:36,375 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 03:47:09] 2026-03-14 07:46:36,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 03:47:09] 2026-03-14 07:46:36,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 03:47:09] 2026-03-14 07:46:36,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | fitting pss+swap vs Time
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | sum of square deviations: 5441962.5
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | sum of deviations: 70058042.5
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | mean x: 1773473464.5
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | mean y: 2672582.269230769
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | intersect: -22828443829.974194
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | chi2: 1.4284510036289784e-05
[2026-03-14 03:47:09] 2026-03-14 07:46:36,377 | INFO     | current memory leak: 12.87 B/s (using 26 data points, chi2=0.00)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | could have reported an average CPU frequency of 3567 MHz (5 samples)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | ..............................
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . Timing measurements:
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . get job = 0 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . initial setup = 5 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . payload setup = 4 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . stage-in = 0 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . payload execution = 1992 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,378 | INFO     | . stage-out = 0 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,379 | INFO     | . log creation = 0 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,379 | INFO     | ..............................
[2026-03-14 03:47:09] 2026-03-14 07:46:36,433 | INFO     | 
[2026-03-14 03:47:09] 2026-03-14 07:46:36,433 | INFO     | job summary report
[2026-03-14 03:47:09] 2026-03-14 07:46:36,433 | INFO     | --------------------------------------------------
[2026-03-14 03:47:09] 2026-03-14 07:46:36,433 | INFO     | PanDA job id: 7045583358
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | task id: 48955010
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | errors: (none)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | pilot state: finished 
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | transexitcode: 0
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | exeerrorcode: 0
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | exeerrordiag: 
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | exitcode: 0
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | exitmsg: OK
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | cpuconsumptiontime: 19153 s
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | nevents: 400
[2026-03-14 03:47:09] 2026-03-14 07:46:36,434 | INFO     | neventsw: 0
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | pid: 1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | pgrp: 1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | corecount: 12
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | event service: False
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | sizes: {0: 2280181, 11: 2280181, 2001: 2305295, 2002: 2314293, 2005: 2314349, 2007: 2314575}
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | --------------------------------------------------
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | 
[2026-03-14 03:47:09] 2026-03-14 07:46:36,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-03-14 03:47:09] 2026-03-14 07:46:36,452 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,454 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 03:47:09] 2026-03-14 07:46:36,456 | INFO     | job 7045583358 has completed (purged errors)
[2026-03-14 03:47:09] 2026-03-14 07:46:36,456 | INFO     | overall cleanup function is called
[2026-03-14 03:47:09] 2026-03-14 07:46:36,921 | WARNING  | process 1274908 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 03:47:09] 2026-03-14 07:46:37,369 | INFO     | using path: /tmp/boinchome/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:47:09] 2026-03-14 07:46:37,465 | INFO     | --- collectZombieJob: --- 10, [1274908]
[2026-03-14 03:47:09] 2026-03-14 07:46:37,465 | INFO     | zombie collector waiting for pid 1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:37,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 03:47:09] 2026-03-14 07:46:37,466 | INFO     | collected zombie processes
[2026-03-14 03:47:09] 2026-03-14 07:46:37,466 | INFO     | will attempt to kill all subprocesses of pid=1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:39,015 | INFO     | number of running child processes to parent process 1274908: 1
[2026-03-14 03:47:09] 2026-03-14 07:46:39,015 | INFO     | maximum number of monitored processes: 6
[2026-03-14 03:47:09] 2026-03-14 07:46:39,016 | INFO     | aborting job monitoring since job object (job id=7045583358) has expired
[2026-03-14 03:47:09] 2026-03-14 07:46:39,128 | INFO     | process IDs to be killed: [1274908] (in reverse order)
[2026-03-14 03:47:09] 2026-03-14 07:46:39,364 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 03:47:09] 2026-03-14 07:46:39,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 03:47:09] 2026-03-14 07:46:39,399 | INFO     | did not find any defunct processes belonging to 1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:39,429 | INFO     | did not find any defunct processes belonging to 1274908
[2026-03-14 03:47:09] 2026-03-14 07:46:39,430 | INFO     | ready for new job
[2026-03-14 03:47:09] 2026-03-14 07:46:39,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 03:47:09] 2026-03-14 07:46:39,431 | INFO     | **************************************
[2026-03-14 03:47:09] 2026-03-14 07:46:39,431 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 03:47:09] 2026-03-14 07:46:39,431 | INFO     | **************************************
[2026-03-14 03:47:09] 2026-03-14 07:46:39,431 | INFO     | 
[2026-03-14 03:47:09] 2026-03-14 07:46:39,436 | INFO     | architecture information:
[2026-03-14 03:47:09] 2026-03-14 07:46:39,437 | INFO     | executing command: cat /etc/os-release
[2026-03-14 03:47:09] 2026-03-14 07:46:39,450 | INFO     | cat /etc/os-release:
[2026-03-14 03:47:09] NAME="CentOS Linux"
[2026-03-14 03:47:09] VERSION="7 (Core)"
[2026-03-14 03:47:09] ID="centos"
[2026-03-14 03:47:09] ID_LIKE="rhel fedora"
[2026-03-14 03:47:09] VERSION_ID="7"
[2026-03-14 03:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 03:47:09] ANSI_COLOR="0;31"
[2026-03-14 03:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 03:47:09] HOME_URL="https://www.centos.org/"
[2026-03-14 03:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 03:47:09] 
[2026-03-14 03:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 03:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 03:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 03:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 03:47:09] 
[2026-03-14 03:47:09] 2026-03-14 07:46:39,450 | INFO     | **************************************
[2026-03-14 03:47:09] 2026-03-14 07:46:39,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-03-14 03:47:09] 2026-03-14 07:46:39,969 | INFO     | sufficient remaining disk space (161809956864 B)
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | INFO     | update_server=False
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 03:47:09] 2026-03-14 07:46:39,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:47:09] 2026-03-14 07:46:39,971 | INFO     | will abort loop
[2026-03-14 03:47:09] 2026-03-14 07:46:40,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 03:47:09] 2026-03-14 07:46:40,930 | INFO     | all data control threads have been joined
[2026-03-14 03:47:09] 2026-03-14 07:46:40,975 | INFO     | [job] retrieve thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:40,976 | INFO     | [job] job monitor thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,246 | INFO     | all payload control threads have been joined
[2026-03-14 03:47:09] 2026-03-14 07:46:41,305 | INFO     | [payload] validate_post thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,329 | INFO     | all job control threads have been joined
[2026-03-14 03:47:09] 2026-03-14 07:46:41,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:47:09] 2026-03-14 07:46:41,580 | INFO     | [job] validate thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,688 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,756 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,933 | INFO     | [data] control thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,934 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:41,975 | INFO     | [data] copytool_out thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:42,069 | INFO     | [data] copytool_in thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:42,076 | INFO     | [payload] failed_post thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:42,252 | INFO     | [payload] control thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:42,330 | INFO     | [job] control thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:42,452 | INFO     | [job] queue monitor thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:44,594 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:46:50,035 | INFO     | job.realtimelogging is not enabled
[2026-03-14 03:47:09] 2026-03-14 07:46:51,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 03:47:09] 2026-03-14 07:47:01,230 | INFO     | [monitor] cgroup control has ended
[2026-03-14 03:47:09] 2026-03-14 07:47:02,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719394916160)>', '<ExcThread(monitor, started 140719112337152)>']
[2026-03-14 03:47:09] 2026-03-14 07:47:07,741 | INFO     | all workflow threads have been joined
[2026-03-14 03:47:09] 2026-03-14 07:47:07,741 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 03:47:09] 2026-03-14 07:47:07,742 | INFO     | traces error code: 0
[2026-03-14 03:47:09] 2026-03-14 07:47:07,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 03:47:09] 2026-03-14 07:47:08,007 | INFO     | 2024s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | INFO     | PID=1270425 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | INFO     | .. there are 84 such processes running
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 03:47:09] 2026-03-14 07:47:09,592 | INFO     | [monitor] control thread has ended
[2026-03-14 03:47:09] 2026-03-14 07:47:09,681 [wrapper] ==== pilot stdout END ====
[2026-03-14 03:47:09] 2026-03-14 07:47:09,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 03:47:09] 2026-03-14 07:47:09,685 [wrapper] pilotpid: 1270425
[2026-03-14 03:47:09] 2026-03-14 07:47:09,687 [wrapper] Pilot exit status: 0
[2026-03-14 03:47:09] 2026-03-14 07:47:09,694 [wrapper] pandaids: 7045583358
[2026-03-14 03:47:09] 2026-03-14 07:47:09,854 [wrapper] cleanup supervisor_pilot 1468916 1270426
[2026-03-14 03:47:09] 2026-03-14 07:47:09,856 [wrapper] Test setup, not cleaning
[2026-03-14 03:47:09] 2026-03-14 07:47:09,858 [wrapper] apfmon messages muted
[2026-03-14 03:47:09] 2026-03-14 07:47:09,860 [wrapper] ==== wrapper stdout END ====
[2026-03-14 03:47:09] 2026-03-14 07:47:09,862 [wrapper] ==== wrapper stderr END ====
[2026-03-14 03:47:09]  *** Error codes and diagnostics ***
[2026-03-14 03:47:09]     "exeErrorCode": 0,
[2026-03-14 03:47:09]     "exeErrorDiag": "",
[2026-03-14 03:47:09]     "pilotErrorCode": 0,
[2026-03-14 03:47:09]     "pilotErrorDiag": "",
[2026-03-14 03:47:09]  *** Listing of results directory ***
[2026-03-14 03:47:09] total 618180
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 21:49 pilot3.tar.gz
[2026-03-14 03:47:09] -rwx------. 1 boincer umatlas     36322 Mar 13 21:49 runpilot2-wrapper.sh
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 21:49 queuedata.json
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas       100 Mar 14 03:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 03:47:09] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 03:12 run_atlas
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas       105 Mar 14 03:12 job.xml
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas 441194940 Mar 14 03:12 EVNT.46701403._001765.pool.root.1
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 03:12 start_atlas.sh
[2026-03-14 03:47:09] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 03:12 shared
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas    597533 Mar 14 03:12 input.tar.gz
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas         0 Mar 14 03:12 boinc_lockfile
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 03:12 pandaJob.out
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas        57 Mar 14 03:12 setup.sh.local
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas   1004579 Mar 14 03:12 agis_schedconf.cvmfs.json
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas   1511579 Mar 14 03:12 agis_ddmendpoints.agis.ALL.json
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas       431 Mar 14 03:12 workernode_map.json
[2026-03-14 03:47:09] drwx------. 5 boincer umatlas      4096 Mar 14 03:12 pilot3
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas      7185 Mar 14 03:38 init_data.xml
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas       530 Mar 14 03:46 boinc_task_state.xml
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas 186500120 Mar 14 03:46 HITS.48955010._037147.pool.root.1
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas        95 Mar 14 03:46 pilot_heartbeat.json
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas      1027 Mar 14 03:46 memory_monitor_summary.json
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas    366482 Mar 14 03:46 log.48955010._037147.job.log.tgz.1
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas      6328 Mar 14 03:46 heartbeat.json
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas        27 Mar 14 03:47 wrapper_checkpoint.txt
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 03:47 boinc_mmap_file
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas       939 Mar 14 03:47 pilotlog.txt
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas    324533 Mar 14 03:47 log.48955010._037147.job.log.1
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas       357 Mar 14 03:47 output.list
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas       620 Mar 14 03:47 runtime_log
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas    706560 Mar 14 03:47 result.tar.gz
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas       650 Mar 14 03:47 ThjMDm6ITL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOarLDmH1YPjn.diag
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas      9338 Mar 14 03:47 runtime_log.err
[2026-03-14 03:47:09] -rw-r--r--. 1 boincer umatlas     21650 Mar 14 03:47 stderr.txt
[2026-03-14 03:47:09] HITS file was successfully produced:
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas 186500120 Mar 14 03:46 shared/HITS.pool.root.1
[2026-03-14 03:47:09]  *** Contents of shared directory: ***
[2026-03-14 03:47:09] total 614288
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas 441194940 Mar 14 03:12 ATLAS.root_0
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 03:12 start_atlas.sh
[2026-03-14 03:47:09] -rw-r--r--. 2 boincer umatlas    597533 Mar 14 03:12 input.tar.gz
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas 186500120 Mar 14 03:46 HITS.pool.root.1
[2026-03-14 03:47:09] -rw-------. 1 boincer umatlas    706560 Mar 14 03:47 result.tar.gz
03:47:11 (1261701): run_atlas exited; CPU time 19252.377308
03:47:11 (1261701): called boinc_finish(0)

</stderr_txt>
]]>

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