Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:18 (3014669): wrapper (7.7.26015): starting
05:40:18 (3014669): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 05:40:18] Arguments: --nthreads 4
[2026-03-15 05:40:18] Threads: 4
[2026-03-15 05:40:18] Checking for CVMFS
[2026-03-15 05:40:18] No cvmfs_config command found, will try listing directly
[2026-03-15 05:40:18] CVMFS is ok
[2026-03-15 05:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 05:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 05:40:18] Further information can be found at the LHC@home message board.
[2026-03-15 05:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 05:40:18] Checking for apptainer binary...
[2026-03-15 05:40:18] which: no apptainer in ((null))
[2026-03-15 05:40:18] apptainer is not installed, using version from CVMFS
[2026-03-15 05:40:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 05:40:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot88/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-15 05:40:18] apptainer works
[2026-03-15 05:40:18] Set ATHENA_PROC_NUMBER=4
[2026-03-15 05:40:18] Set ATHENA_CORE_NUMBER=4
[2026-03-15 05:40:18] Starting ATLAS job with PandaID=7045456821
[2026-03-15 05:40:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot88/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 06:57:00]  *** The last 200 lines of the pilot log: ***
[2026-03-15 06:57:00] 2026-03-15 05:56:23,648 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/log.48955010._036573.job.log.tgz.1 /var/lib/boinc/var/slot88/slots/2/lo
[2026-03-15 06:57:00] 2026-03-15 05:56:23,667 | INFO     | adding to output.list: log.48955010._036573.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/14/log.48955010._036573.job.log.tg
[2026-03-15 06:57:00] 2026-03-15 05:56:23,667 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 06:57:00] 2026-03-15 05:56:23,668 | INFO     | summary of transferred files:
[2026-03-15 06:57:00] 2026-03-15 05:56:23,668 | INFO     |  -- lfn=log.48955010._036573.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 06:57:00] 2026-03-15 05:56:23,668 | INFO     | stage-out finished correctly
[2026-03-15 06:57:00] 2026-03-15 05:56:23,861 | WARNING  | process 3025108 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 06:57:00] 2026-03-15 05:56:23,861 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,862 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,862 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 06:57:00] 2026-03-15 05:56:23,862 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 06:57:00] 2026-03-15 05:56:23,863 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2799723 B
[2026-03-15 06:57:00] 2026-03-15 05:56:23,863 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15857 B
[2026-03-15 06:57:00] 2026-03-15 05:56:23,863 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/2
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | sufficient remaining disk space (51948552192 B)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | size of work directory /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821: 3097980 B (within 5033164800 B limit)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | pfn file=/var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/HITS.48955010._036573.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | total size of present files: 0 B (workdir size: 3097980 B)
[2026-03-15 06:57:00] 2026-03-15 05:56:23,875 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/HITS.48955010._036573.pool.root.1 since it does not exist
[2026-03-15 06:57:00] 2026-03-15 05:56:24,232 | INFO     | time since job start (4554s) is within the limit (345600.0s)
[2026-03-15 06:57:00] 2026-03-15 05:56:24,366 | INFO     | number of running child processes to parent process 3025108: 1
[2026-03-15 06:57:00] 2026-03-15 05:56:24,366 | INFO     | maximum number of monitored processes: 6
[2026-03-15 06:57:00] 2026-03-15 05:56:24,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 06:57:00] 2026-03-15 05:56:26,237 | INFO     | time since job start (4556s) is within the limit (345600.0s)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,869 | INFO     | monitor loop #328: job 0:7045456821 is in state 'finished'
[2026-03-15 06:57:00] 2026-03-15 05:56:26,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,887 | INFO     | job 7045456821 has state=finished
[2026-03-15 06:57:00] 2026-03-15 05:56:26,887 | INFO     | preparing for final server update for job 7045456821 in state='finished'
[2026-03-15 06:57:00] 2026-03-15 05:56:26,887 | INFO     | reading metadata from: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/jobReport.json
[2026-03-15 06:57:00] 2026-03-15 05:56:26,889 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot88/slots/2/workernode_map.json
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | INFO     | this job has now completed (state=finished)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | INFO     | log transfer has been attempted: DONE
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | INFO     | job 7045456821 has finished - writing final server update
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3875231/.job.ad'
[2026-03-15 06:57:00] 2026-03-15 05:56:26,890 | INFO     | total number of processed events: 400 (read)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,908 | INFO     | using path: /var/lib/boinc/var/slot88/slots/2/PanDA_Pilot-7045456821/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,909 | INFO     | extracted standard info from prmon json
[2026-03-15 06:57:00] 2026-03-15 05:56:26,909 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 06:57:00] 2026-03-15 05:56:26,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 06:57:00] 2026-03-15 05:56:26,909 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 06:57:00] 2026-03-15 05:56:26,909 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 06:57:00] 2026-03-15 05:56:26,910 | INFO     | fitting pss+swap vs Time
[2026-03-15 06:57:00] 2026-03-15 05:56:26,910 | INFO     | sum of square deviations: 97479037.0
[2026-03-15 06:57:00] 2026-03-15 05:56:26,910 | INFO     | sum of deviations: -78791534.50000003
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | mean x: 1773551999.5
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | mean y: 2333511.220588235
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | intersect: 1435881562.7483058
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | chi2: 0.0005566367775001722
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | current memory leak: -0.81 B/s (using 68 data points, chi2=0.00)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | could have reported an average CPU frequency of 3576 MHz (6 samples)
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | ..............................
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . Timing measurements:
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . get job = 0 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . initial setup = 5 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . payload setup = 5 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . stage-in = 0 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . payload execution = 4532 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . stage-out = 0 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | . log creation = 0 s
[2026-03-15 06:57:00] 2026-03-15 05:56:26,911 | INFO     | ..............................
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | job summary report
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | --------------------------------------------------
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | PanDA job id: 7045456821
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | task id: 48955010
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | errors: (none)
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | pilot state: finished 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | transexitcode: 0
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | exeerrorcode: 0
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | exeerrordiag: 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | exitcode: 0
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | exitmsg: OK
[2026-03-15 06:57:00] 2026-03-15 05:56:27,207 | INFO     | cpuconsumptiontime: 17228 s
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | nevents: 400
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | neventsw: 0
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | pid: 3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | pgrp: 3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | corecount: 4
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | event service: False
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | sizes: {0: 2280190, 11: 2280190, 4541: 2315411, 4542: 2315439, 4545: 2315633}
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | --------------------------------------------------
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,208 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot88/slots/2
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | job 7045456821 has completed (purged errors)
[2026-03-15 06:57:00] 2026-03-15 05:56:27,225 | INFO     | overall cleanup function is called
[2026-03-15 06:57:00] 2026-03-15 05:56:27,854 | INFO     | PID=3019265 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 06:57:00] 2026-03-15 05:56:27,854 | INFO     | .. there are 49 such processes running
[2026-03-15 06:57:00] 2026-03-15 05:56:28,231 | INFO     | --- collectZombieJob: --- 10, [3025108]
[2026-03-15 06:57:00] 2026-03-15 05:56:28,232 | INFO     | zombie collector waiting for pid 3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:28,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 06:57:00] 2026-03-15 05:56:28,232 | INFO     | collected zombie processes
[2026-03-15 06:57:00] 2026-03-15 05:56:28,232 | INFO     | will attempt to kill all subprocesses of pid=3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:28,721 | INFO     | process IDs to be killed: [3025108] (in reverse order)
[2026-03-15 06:57:00] 2026-03-15 05:56:28,960 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 06:57:00] 2026-03-15 05:56:28,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 06:57:00] 2026-03-15 05:56:28,993 | INFO     | did not find any defunct processes belonging to 3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:29,023 | INFO     | did not find any defunct processes belonging to 3025108
[2026-03-15 06:57:00] 2026-03-15 05:56:29,023 | INFO     | ready for new job
[2026-03-15 06:57:00] 2026-03-15 05:56:29,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 06:57:00] 2026-03-15 05:56:29,025 | INFO     | **************************************
[2026-03-15 06:57:00] 2026-03-15 05:56:29,025 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 06:57:00] 2026-03-15 05:56:29,025 | INFO     | **************************************
[2026-03-15 06:57:00] 2026-03-15 05:56:29,025 | INFO     | 
[2026-03-15 06:57:00] 2026-03-15 05:56:29,031 | INFO     | architecture information:
[2026-03-15 06:57:00] 2026-03-15 05:56:29,031 | INFO     | executing command: cat /etc/os-release
[2026-03-15 06:57:00] 2026-03-15 05:56:29,044 | INFO     | cat /etc/os-release:
[2026-03-15 06:57:00] NAME="CentOS Linux"
[2026-03-15 06:57:00] VERSION="7 (Core)"
[2026-03-15 06:57:00] ID="centos"
[2026-03-15 06:57:00] ID_LIKE="rhel fedora"
[2026-03-15 06:57:00] VERSION_ID="7"
[2026-03-15 06:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 06:57:00] ANSI_COLOR="0;31"
[2026-03-15 06:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 06:57:00] HOME_URL="https://www.centos.org/"
[2026-03-15 06:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 06:57:00] 
[2026-03-15 06:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 06:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 06:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 06:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 06:57:00] 
[2026-03-15 06:57:00] 2026-03-15 05:56:29,044 | INFO     | **************************************
[2026-03-15 06:57:00] 2026-03-15 05:56:29,547 | INFO     | executing command: df -mP /var/lib/boinc/var/slot88/slots/2
[2026-03-15 06:57:00] 2026-03-15 05:56:29,562 | INFO     | sufficient remaining disk space (51941212160 B)
[2026-03-15 06:57:00] 2026-03-15 05:56:29,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 06:57:00] 2026-03-15 05:56:29,562 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 06:57:00] 2026-03-15 05:56:29,562 | INFO     | update_server=False
[2026-03-15 06:57:00] 2026-03-15 05:56:29,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 06:57:00] 2026-03-15 05:56:29,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 06:57:00] 2026-03-15 05:56:29,682 | INFO     | all data control threads have been joined
[2026-03-15 06:57:00] 2026-03-15 05:56:29,855 | INFO     | all payload control threads have been joined
[2026-03-15 06:57:00] 2026-03-15 05:56:30,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:57:00] 2026-03-15 05:56:30,379 | INFO     | aborting loop
[2026-03-15 06:57:00] 2026-03-15 05:56:30,568 | INFO     | [job] retrieve thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:30,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 06:57:00] 2026-03-15 05:56:30,687 | INFO     | [data] control thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:30,861 | INFO     | [payload] control thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:30,862 | INFO     | [payload] failed_post thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:30,992 | INFO     | all job control threads have been joined
[2026-03-15 06:57:00] 2026-03-15 05:56:31,337 | INFO     | [job] validate thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,349 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,381 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,384 | INFO     | [job] job monitor thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,568 | INFO     | [data] copytool_out thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,574 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,624 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,714 | INFO     | [data] copytool_in thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,892 | INFO     | [payload] validate_post thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:31,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 06:57:00] 2026-03-15 05:56:31,998 | INFO     | [job] control thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:32,976 | INFO     | [job] queue monitor thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:34,616 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 06:57:00] 2026-03-15 05:56:37,978 | INFO     | [monitor] cgroup control has ended
[2026-03-15 06:57:00] 2026-03-15 05:56:38,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22616519104320)>', '<ExcThread(monitor, started 22616209327872)>']
[2026-03-15 06:57:00] 2026-03-15 05:56:43,477 | INFO     | all workflow threads have been joined
[2026-03-15 06:57:00] 2026-03-15 05:56:43,477 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 06:57:00] 2026-03-15 05:56:43,477 | INFO     | traces error code: 0
[2026-03-15 06:57:00] 2026-03-15 05:56:43,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 06:57:00] 2026-03-15 05:57:00,514 | INFO     | PID=3019265 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 06:57:00] 2026-03-15 05:57:00,515 | INFO     | .. there are 49 such processes running
[2026-03-15 06:57:00] 2026-03-15 05:57:00,515 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 06:57:00] 2026-03-15 05:57:00,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 06:57:00] 2026-03-15 05:57:00,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 06:57:00] 2026-03-15 05:57:00,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 06:57:00] 2026-03-15 05:57:00,516 | CRITICAL | thread 'MainThread' is not alive
[2026-03-15 06:57:00] 2026-03-15 05:57:00,516 | INFO     | [monitor] control thread has ended
[2026-03-15 06:57:00] 2026-03-15 05:57:00,681 [wrapper] ==== pilot stdout END ====
[2026-03-15 06:57:00] 2026-03-15 05:57:00,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 06:57:00] 2026-03-15 05:57:00,686 [wrapper] pilotpid: 3019265
[2026-03-15 06:57:00] 2026-03-15 05:57:00,688 [wrapper] Pilot exit status: 0
[2026-03-15 06:57:00] 2026-03-15 05:57:00,695 [wrapper] pandaids: 7045456821
[2026-03-15 06:57:00] 2026-03-15 05:57:00,820 [wrapper] cleanup supervisor_pilot 3763620 3019266
[2026-03-15 06:57:00] 2026-03-15 05:57:00,823 [wrapper] Test setup, not cleaning
[2026-03-15 06:57:00] 2026-03-15 05:57:00,825 [wrapper] apfmon messages muted
[2026-03-15 06:57:00] 2026-03-15 05:57:00,827 [wrapper] ==== wrapper stdout END ====
[2026-03-15 06:57:00] 2026-03-15 05:57:00,828 [wrapper] ==== wrapper stderr END ====
[2026-03-15 06:57:00]  *** Error codes and diagnostics ***
[2026-03-15 06:57:00]     "exeErrorCode": 0,
[2026-03-15 06:57:00]     "exeErrorDiag": "",
[2026-03-15 06:57:00]     "pilotErrorCode": 0,
[2026-03-15 06:57:00]     "pilotErrorDiag": "",
[2026-03-15 06:57:00]  *** Listing of results directory ***
[2026-03-15 06:57:00] total 612292
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-15 06:57:00] -rwx------. 1 boinc boinc     36322 Mar 14 01:51 runpilot2-wrapper.sh
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc      5111 Mar 14 01:52 queuedata.json
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc       100 Mar 15 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 06:57:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 05:40 run_atlas
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc       105 Mar 15 05:40 job.xml
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc 446575384 Mar 15 05:40 EVNT.46701403._001726.pool.root.1
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc     15845 Mar 15 05:40 start_atlas.sh
[2026-03-15 06:57:00] drwxrwx--x. 2 boinc boinc      4096 Mar 15 05:40 shared
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc    597532 Mar 15 05:40 input.tar.gz
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc      6707 Mar 15 05:40 init_data.xml
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc         0 Mar 15 05:40 boinc_lockfile
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc      2563 Mar 15 05:40 pandaJob.out
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc   1006481 Mar 15 05:40 agis_schedconf.cvmfs.json
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc   1511579 Mar 15 05:40 agis_ddmendpoints.agis.ALL.json
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc       444 Mar 15 05:40 workernode_map.json
[2026-03-15 06:57:00] drwx------. 5 boinc boinc      4096 Mar 15 05:40 pilot3
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc 174586705 Mar 15 06:56 HITS.48955010._036573.pool.root.1
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc      1029 Mar 15 06:56 memory_monitor_summary.json
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc    276385 Mar 15 06:56 log.48955010._036573.job.log.tgz.1
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc      6356 Mar 15 06:56 heartbeat.json
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc       530 Mar 15 06:56 boinc_task_state.xml
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc        27 Mar 15 06:56 wrapper_checkpoint.txt
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc      8192 Mar 15 06:56 boinc_mmap_file
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc        95 Mar 15 06:57 pilot_heartbeat.json
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc       893 Mar 15 06:57 pilotlog.txt
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc    669895 Mar 15 06:57 log.48955010._036573.job.log.1
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc       357 Mar 15 06:57 output.list
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc       620 Mar 15 06:57 runtime_log
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc    962560 Mar 15 06:57 result.tar.gz
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc      9204 Mar 15 06:57 runtime_log.err
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc       662 Mar 15 06:57 L6YLDm0OSL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgkoLDmPmDT3n.diag
[2026-03-15 06:57:00] -rw-r--r--. 1 boinc boinc     22645 Mar 15 06:57 stderr.txt
[2026-03-15 06:57:00] HITS file was successfully produced:
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc 174586705 Mar 15 06:56 shared/HITS.pool.root.1
[2026-03-15 06:57:00]  *** Contents of shared directory: ***
[2026-03-15 06:57:00] total 608156
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc 446575384 Mar 15 05:40 ATLAS.root_0
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc     15845 Mar 15 05:40 start_atlas.sh
[2026-03-15 06:57:00] -rw-r--r--. 2 boinc boinc    597532 Mar 15 05:40 input.tar.gz
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc 174586705 Mar 15 06:56 HITS.pool.root.1
[2026-03-15 06:57:00] -rw-------. 1 boinc boinc    962560 Mar 15 06:57 result.tar.gz
06:57:02 (3014669): run_atlas exited; CPU time 17409.414742
06:57:02 (3014669): called boinc_finish(0)

</stderr_txt>
]]>

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