Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:46 (566866): wrapper (7.7.26015): starting
17:54:46 (566866): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 17:54:46] Arguments: --nthreads 4
[2026-03-14 17:54:46] Threads: 4
[2026-03-14 17:54:46] Checking for CVMFS
[2026-03-14 17:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 17:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 17:54:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 17:54:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 17:54:47] 2.9.2.0 141980 24562 104212 157284 1 50 30638781 36864000 0 130560 0 12823575 99.986 920725 7550 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 17:54:47] CVMFS is ok
[2026-03-14 17:54:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:54:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 17:54:47] Further information can be found at the LHC@home message board.
[2026-03-14 17:54:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:54:47] Checking for apptainer binary...
[2026-03-14 17:54:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 17:54:47] Running /usr/bin/apptainer --version
[2026-03-14 17:54:47] apptainer version 1.4.1-1.1
[2026-03-14 17:54:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:54:47] magicA244a
[2026-03-14 17:54:47] apptainer works
[2026-03-14 17:54:47] Set ATHENA_PROC_NUMBER=4
[2026-03-14 17:54:47] Set ATHENA_CORE_NUMBER=4
[2026-03-14 17:54:47] Starting ATLAS job with PandaID=7045457579
[2026-03-14 17:54:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:57:11]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:57:11] 2026-03-14 17:56:21,613 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:21,863 | INFO     | all payload control threads have been joined
[2026-03-14 18:57:11] 2026-03-14 17:56:21,893 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:21,916 | INFO     | all job control threads have been joined
[2026-03-14 18:57:11] 2026-03-14 17:56:21,926 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,195 | INFO     | [data] control thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,381 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:57:11] 2026-03-14 17:56:22,524 | INFO     | [job] validate thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,603 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,671 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,798 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,803 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,868 | INFO     | [payload] control thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,922 | INFO     | [job] control thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:22,934 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:26,455 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:31,556 | INFO     | job.realtimelogging is not enabled
[2026-03-14 18:57:11] 2026-03-14 17:56:32,562 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:57:11] 2026-03-14 17:56:50,710 | INFO     | PID=570988 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 18:57:11] 2026-03-14 17:56:50,710 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:57:11] 2026-03-14 17:56:50,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:57:11] 2026-03-14 17:56:50,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:57:11] 2026-03-14 17:57:04,443 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:57:11] 2026-03-14 17:57:05,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140640489002816)>', '<ExcThread(monitor, started 140639610058496)>']
[2026-03-14 18:57:11] 2026-03-14 17:57:06,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:57:11] 2026-03-14 17:57:06,796 | INFO     | [monitor] control thread has ended
[2026-03-14 18:57:11] 2026-03-14 17:57:10,875 | INFO     | all workflow threads have been joined
[2026-03-14 18:57:11] 2026-03-14 17:57:10,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:57:11] 2026-03-14 17:57:10,876 | INFO     | traces error code: 0
[2026-03-14 18:57:11] 2026-03-14 17:57:10,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:57:11] 2026-03-14 17:57:10,930 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:57:11] 2026-03-14 17:57:10,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:57:11] 2026-03-14 17:57:10,935 [wrapper] pilotpid: 570988
[2026-03-14 18:57:11] 2026-03-14 17:57:10,938 [wrapper] Pilot exit status: 0
[2026-03-14 18:57:11] 2026-03-14 17:57:10,946 [wrapper] pandaids: 7045457579
[2026-03-14 18:57:11] 2026-03-14 17:57:10,964 [wrapper] cleanup supervisor_pilot  581564 570989
[2026-03-14 18:57:11] 2026-03-14 17:57:10,967 [wrapper] Test setup, not cleaning
[2026-03-14 18:57:11] 2026-03-14 17:57:10,970 [wrapper] apfmon messages muted
[2026-03-14 18:57:11] 2026-03-14 17:57:10,972 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:57:11] 2026-03-14 17:57:10,975 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:57:11]  *** Error codes and diagnostics ***
[2026-03-14 18:57:11]     "exeErrorCode": 0,
[2026-03-14 18:57:11]     "exeErrorDiag": "",
[2026-03-14 18:57:11]     "pilotErrorCode": 0,
[2026-03-14 18:57:11]     "pilotErrorDiag": "",
[2026-03-14 18:57:11]  *** Listing of results directory ***
[2026-03-14 18:57:11] total 624832
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-14 18:57:11] -rwx------ 1 boinc boinc     36322 Mar 14 01:51 runpilot2-wrapper.sh
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      5111 Mar 14 01:52 queuedata.json
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc       100 Mar 14 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:57:11] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 17:54 run_atlas
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc       105 Mar 14 17:54 job.xml
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc 443325464 Mar 14 17:54 EVNT.46701403._001729.pool.root.1
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc    597533 Mar 14 17:54 input.tar.gz
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc     15845 Mar 14 17:54 start_atlas.sh
[2026-03-14 18:57:11] drwxrwx--x 2 boinc boinc      4096 Mar 14 17:54 shared
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc         0 Mar 14 17:54 boinc_setup_complete
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      6438 Mar 14 17:54 init_data.xml
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc         0 Mar 14 17:54 boinc_lockfile
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      2564 Mar 14 17:54 pandaJob.out
[2026-03-14 18:57:11] -rw------- 1 boinc boinc   1004579 Mar 14 17:54 agis_schedconf.cvmfs.json
[2026-03-14 18:57:11] -rw------- 1 boinc boinc   1511579 Mar 14 17:54 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:57:11] -rw------- 1 boinc boinc       420 Mar 14 17:54 workernode_map.json
[2026-03-14 18:57:11] drwx------ 5 boinc boinc      4096 Mar 14 17:54 pilot3
[2026-03-14 18:57:11] -rw------- 1 boinc boinc 190924203 Mar 14 18:55 HITS.48955010._036734.pool.root.1
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc       530 Mar 14 18:56 boinc_task_state.xml
[2026-03-14 18:57:11] -rw------- 1 boinc boinc      1012 Mar 14 18:56 memory_monitor_summary.json
[2026-03-14 18:57:11] -rw------- 1 boinc boinc    275552 Mar 14 18:56 log.48955010._036734.job.log.tgz.1
[2026-03-14 18:57:11] -rw------- 1 boinc boinc        95 Mar 14 18:56 pilot_heartbeat.json
[2026-03-14 18:57:11] -rw------- 1 boinc boinc      6304 Mar 14 18:56 heartbeat.json
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      8192 Mar 14 18:56 boinc_mmap_file
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc        27 Mar 14 18:56 wrapper_checkpoint.txt
[2026-03-14 18:57:11] -rw------- 1 boinc boinc      4819 Mar 14 18:57 pilotlog.txt
[2026-03-14 18:57:11] -rw------- 1 boinc boinc    552714 Mar 14 18:57 log.48955010._036734.job.log.1
[2026-03-14 18:57:11] -rw------- 1 boinc boinc       357 Mar 14 18:57 output.list
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc       620 Mar 14 18:57 runtime_log
[2026-03-14 18:57:11] -rw------- 1 boinc boinc    849920 Mar 14 18:57 result.tar.gz
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      8916 Mar 14 18:57 runtime_log.err
[2026-03-14 18:57:11] -rw------- 1 boinc boinc       661 Mar 14 18:57 iboKDmAPSL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYSrLDm5JduSn.diag
[2026-03-14 18:57:11] -rw-r--r-- 1 boinc boinc      6638 Mar 14 18:57 stderr.txt
[2026-03-14 18:57:11] HITS file was successfully produced:
[2026-03-14 18:57:11] -rw------- 1 boinc boinc 190924203 Mar 14 18:55 shared/HITS.pool.root.1
[2026-03-14 18:57:11]  *** Contents of shared directory: ***
[2026-03-14 18:57:11] total 620824
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc 443325464 Mar 14 17:54 ATLAS.root_0
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc    597533 Mar 14 17:54 input.tar.gz
[2026-03-14 18:57:11] -rw-r--r-- 2 boinc boinc     15845 Mar 14 17:54 start_atlas.sh
[2026-03-14 18:57:11] -rw------- 1 boinc boinc 190924203 Mar 14 18:55 HITS.pool.root.1
[2026-03-14 18:57:11] -rw------- 1 boinc boinc    849920 Mar 14 18:57 result.tar.gz
18:57:12 (566866): run_atlas exited; CPU time 13336.272970
18:57:12 (566866): called boinc_finish(0)

</stderr_txt>
]]>

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