Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:44 (801): wrapper (7.7.26015): starting
13:54:44 (801): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 13:54:44] Arguments: --nthreads 8
[2026-03-14 13:54:44] Threads: 8
[2026-03-14 13:54:44] Checking for CVMFS
[2026-03-14 13:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:54:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:54:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:54:47] 2.11.2.0 27453 26185 104364 157278 3 54 19604928 25165824 4777 130560 155 7553224 99.870 3091976 142 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 13:54:47] CVMFS is ok
[2026-03-14 13:54:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:54:47] Checking for apptainer binary...
[2026-03-14 13:54:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:54:47] Running /usr/bin/apptainer --version
[2026-03-14 13:54:47] apptainer version 1.3.2-1.el7
[2026-03-14 13:54:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:55:15] cg-vwn459.simple-grid.lan
[2026-03-14 13:55:15] apptainer works
[2026-03-14 13:55:15] Set ATHENA_PROC_NUMBER=8
[2026-03-14 13:55:15] Set ATHENA_CORE_NUMBER=8
[2026-03-14 13:55:15] Starting ATLAS job with PandaID=7045372640
[2026-03-14 13:55:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:35:10]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:35:10] 2026-03-14 16:34:12,887 | INFO     | time since job start (12813s) is within the limit (345600.0s)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,844 | INFO     | job 7045372640 has state=finished
[2026-03-14 17:35:10] 2026-03-14 16:34:13,845 | INFO     | preparing for final server update for job 7045372640 in state='finished'
[2026-03-14 17:35:10] 2026-03-14 16:34:13,845 | INFO     | reading metadata from: /var/lib/boinc/slots/8/PanDA_Pilot-7045372640/jobReport.json
[2026-03-14 17:35:10] 2026-03-14 16:34:13,847 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/8/workernode_map.json
[2026-03-14 17:35:10] 2026-03-14 16:34:13,848 | INFO     | this job has now completed (state=finished)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,848 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,848 | INFO     | log transfer has been attempted: DONE
[2026-03-14 17:35:10] 2026-03-14 16:34:13,848 | INFO     | job 7045372640 has finished - writing final server update
[2026-03-14 17:35:10] 2026-03-14 16:34:13,849 | INFO     | total number of processed events: 400 (read)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,851 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7045372640/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,851 | INFO     | extracted standard info from prmon json
[2026-03-14 17:35:10] 2026-03-14 16:34:13,851 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:35:10] 2026-03-14 16:34:13,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:35:10] 2026-03-14 16:34:13,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:35:10] 2026-03-14 16:34:13,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:35:10] 2026-03-14 16:34:13,856 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:35:10] 2026-03-14 16:34:13,857 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 17:35:10] 2026-03-14 16:34:13,858 | INFO     | sum of deviations: 61027704857.999985
[2026-03-14 17:35:10] 2026-03-14 16:34:13,858 | INFO     | mean x: 1773499773.5
[2026-03-14 17:35:10] 2026-03-14 16:34:13,858 | INFO     | mean y: 2438695.3106796117
[2026-03-14 17:35:10] 2026-03-14 16:34:13,858 | INFO     | intersect: -39926551196.39558
[2026-03-14 17:35:10] 2026-03-14 16:34:13,859 | INFO     | chi2: 5.230324457953231
[2026-03-14 17:35:10] 2026-03-14 16:34:13,859 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | sum of deviations: 73023649305.00002
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | mean x: 1773499621.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | mean y: 2447979.552238806
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | intersect: -51430188384.07325
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | chi2: 4.497714764646724
[2026-03-14 17:35:10] 2026-03-14 16:34:13,861 | INFO     | current chi2=4.497714764646724 (change=14.006964562064617 %)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,862 | INFO     | right removable region: 200
[2026-03-14 17:35:10] 2026-03-14 16:34:13,862 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,863 | INFO     | sum of deviations: -6551572691.000001
[2026-03-14 17:35:10] 2026-03-14 16:34:13,863 | INFO     | mean x: 1773499926.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,864 | INFO     | mean y: 2492094.184079602
[2026-03-14 17:35:10] 2026-03-14 16:34:13,864 | INFO     | intersect: 4616952162.710717
[2026-03-14 17:35:10] 2026-03-14 16:34:13,864 | INFO     | chi2: 0.9632092034806709
[2026-03-14 17:35:10] 2026-03-14 16:34:13,864 | INFO     | current chi2=0.9632092034806709 (change=81.58414050172328 %)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,864 | INFO     | sum of square deviations: 2334722845.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,866 | INFO     | sum of deviations: -16873084401.000002
[2026-03-14 17:35:10] 2026-03-14 16:34:13,866 | INFO     | mean x: 1773500078.5
[2026-03-14 17:35:10] 2026-03-14 16:34:13,866 | INFO     | mean y: 2500589.102040816
[2026-03-14 17:35:10] 2026-03-14 16:34:13,866 | INFO     | intersect: 12819617864.412134
[2026-03-14 17:35:10] 2026-03-14 16:34:13,866 | INFO     | chi2: 0.8044487584979559
[2026-03-14 17:35:10] 2026-03-14 16:34:13,867 | INFO     | current chi2=0.8044487584979559 (change=16.482446846335684 %)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,867 | INFO     | left removable region: 20
[2026-03-14 17:35:10] 2026-03-14 16:34:13,867 | INFO     | sum of square deviations: 1808350185.0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,868 | INFO     | sum of deviations: -5248009370.5
[2026-03-14 17:35:10] 2026-03-14 16:34:13,869 | INFO     | mean x: 1773500200.5
[2026-03-14 17:35:10] 2026-03-14 16:34:13,869 | INFO     | mean y: 2513552.3722222224
[2026-03-14 17:35:10] 2026-03-14 16:34:13,869 | INFO     | intersect: 5149384854.186826
[2026-03-14 17:35:10] 2026-03-14 16:34:13,869 | INFO     | chi2: 0.005556110370464417
[2026-03-14 17:35:10] 2026-03-14 16:34:13,869 | INFO     | current memory leak: -2.90 B/s (using 180 data points, chi2=0.01)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | ..............................
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | . Timing measurements:
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | . get job = 0 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | . initial setup = 105 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,870 | INFO     | . payload setup = 148 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,871 | INFO     | . stage-in = 0 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,871 | INFO     | . payload execution = 12641 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,871 | INFO     | . stage-out = 3 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,871 | INFO     | . log creation = 1 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,871 | INFO     | ..............................
[2026-03-14 17:35:10] 2026-03-14 16:34:13,997 | INFO     | 
[2026-03-14 17:35:10] 2026-03-14 16:34:13,997 | INFO     | job summary report
[2026-03-14 17:35:10] 2026-03-14 16:34:13,997 | INFO     | --------------------------------------------------
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | PanDA job id: 7045372640
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | task id: 48955010
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | errors: (none)
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | pilot state: finished 
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | transexitcode: 0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | exeerrorcode: 0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | exeerrordiag: 
[2026-03-14 17:35:10] 2026-03-14 16:34:13,998 | INFO     | exitcode: 0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | exitmsg: OK
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | cpuconsumptiontime: 48669 s
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | nevents: 400
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | neventsw: 0
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | pid: 9423
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | pgrp: 9423
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | corecount: 8
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | event service: False
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | sizes: {0: 2279690, 1: 2280147, 2: 2280207, 12: 2280235, 12794: 2310168, 12795: 2310167, 12800: 2319405, 12803: 2319543}
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | --------------------------------------------------
[2026-03-14 17:35:10] 2026-03-14 16:34:13,999 | INFO     | 
[2026-03-14 17:35:10] 2026-03-14 16:34:14,000 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-14 17:35:10] 2026-03-14 16:34:14,289 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | job 7045372640 has completed (purged errors)
[2026-03-14 17:35:10] 2026-03-14 16:34:14,292 | INFO     | overall cleanup function is called
[2026-03-14 17:35:10] 2026-03-14 16:34:15,300 | INFO     | --- collectZombieJob: --- 10, [9423]
[2026-03-14 17:35:10] 2026-03-14 16:34:15,300 | INFO     | zombie collector waiting for pid 9423
[2026-03-14 17:35:10] 2026-03-14 16:34:15,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:35:10] 2026-03-14 16:34:15,301 | INFO     | collected zombie processes
[2026-03-14 17:35:10] 2026-03-14 16:34:15,301 | INFO     | will attempt to kill all subprocesses of pid=9423
[2026-03-14 17:35:10] 2026-03-14 16:34:15,416 | INFO     | process IDs to be killed: [9423] (in reverse order)
[2026-03-14 17:35:10] 2026-03-14 16:34:16,298 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:35:10] 2026-03-14 16:34:16,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:35:10] 2026-03-14 16:34:16,301 | INFO     | did not find any defunct processes belonging to 9423
[2026-03-14 17:35:10] 2026-03-14 16:34:16,304 | INFO     | did not find any defunct processes belonging to 9423
[2026-03-14 17:35:10] 2026-03-14 16:34:16,304 | INFO     | ready for new job
[2026-03-14 17:35:10] 2026-03-14 16:34:16,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:35:10] 2026-03-14 16:34:16,306 | INFO     | **************************************
[2026-03-14 17:35:10] 2026-03-14 16:34:16,306 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:35:10] 2026-03-14 16:34:16,307 | INFO     | **************************************
[2026-03-14 17:35:10] 2026-03-14 16:34:16,307 | INFO     | 
[2026-03-14 17:35:10] 2026-03-14 16:34:16,307 | INFO     | pilot is running in a VM
[2026-03-14 17:35:10] 2026-03-14 16:34:16,307 | INFO     | architecture information:
[2026-03-14 17:35:10] 2026-03-14 16:34:16,312 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:35:10] 2026-03-14 16:34:16,499 | INFO     | cat /etc/os-release:
[2026-03-14 17:35:10] NAME="CentOS Linux"
[2026-03-14 17:35:10] VERSION="7 (Core)"
[2026-03-14 17:35:10] ID="centos"
[2026-03-14 17:35:10] ID_LIKE="rhel fedora"
[2026-03-14 17:35:10] VERSION_ID="7"
[2026-03-14 17:35:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:35:10] ANSI_COLOR="0;31"
[2026-03-14 17:35:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:35:10] HOME_URL="https://www.centos.org/"
[2026-03-14 17:35:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:35:10] 
[2026-03-14 17:35:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:35:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:35:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:35:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:35:10] 
[2026-03-14 17:35:10] 2026-03-14 16:34:16,500 | INFO     | **************************************
[2026-03-14 17:35:10] 2026-03-14 16:34:17,003 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-14 17:35:10] 2026-03-14 16:34:17,190 | INFO     | sufficient remaining disk space (496098082816 B)
[2026-03-14 17:35:10] 2026-03-14 16:34:17,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:35:10] 2026-03-14 16:34:17,190 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:35:10] 2026-03-14 16:34:17,190 | INFO     | update_server=False
[2026-03-14 17:35:10] 2026-03-14 16:34:17,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:35:10] 2026-03-14 16:34:17,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:35:10] 2026-03-14 16:34:17,334 | INFO     | all data control threads have been joined
[2026-03-14 17:35:10] 2026-03-14 16:34:17,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:35:10] 2026-03-14 16:34:18,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:35:10] 2026-03-14 16:34:18,023 | INFO     | aborting loop
[2026-03-14 17:35:10] 2026-03-14 16:34:18,197 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:18,314 | INFO     | all job control threads have been joined
[2026-03-14 17:35:10] 2026-03-14 16:34:18,340 | INFO     | [data] control thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:18,385 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:18,464 | INFO     | all payload control threads have been joined
[2026-03-14 17:35:10] 2026-03-14 16:34:19,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:35:10] 2026-03-14 16:34:19,024 | INFO     | [job] validate thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,029 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,036 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,200 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,320 | INFO     | [job] control thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,435 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,437 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,466 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,470 | INFO     | [payload] control thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:19,719 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:20,020 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:21,522 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:35:10] 2026-03-14 16:34:46,139 | INFO     | PID=4906 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 17:35:10] 2026-03-14 16:34:46,139 | INFO     | .. there are 9 such processes running
[2026-03-14 17:35:10] 2026-03-14 16:34:46,140 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:35:10] 2026-03-14 16:34:46,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:35:10] 2026-03-14 16:34:46,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:35:10] 2026-03-14 16:35:00,331 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:35:10] 2026-03-14 16:35:01,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269307004736)>', '<ExcThread(monitor, started 140268724545280)>']
[2026-03-14 17:35:10] 2026-03-14 16:35:01,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:35:10] 2026-03-14 16:35:01,229 | INFO     | [monitor] control thread has ended
[2026-03-14 17:35:10] 2026-03-14 16:35:06,175 | INFO     | all workflow threads have been joined
[2026-03-14 17:35:10] 2026-03-14 16:35:06,175 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:35:10] 2026-03-14 16:35:06,176 | INFO     | traces error code: 0
[2026-03-14 17:35:10] 2026-03-14 16:35:06,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:35:10] 2026-03-14 16:35:06,536 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:35:10] 2026-03-14 16:35:06,585 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:35:10] 2026-03-14 16:35:06,636 [wrapper] pilotpid: 4906
[2026-03-14 17:35:10] 2026-03-14 16:35:06,682 [wrapper] Pilot exit status: 0
[2026-03-14 17:35:10] 2026-03-14 16:35:07,028 [wrapper] pandaids: 7045372640
[2026-03-14 17:35:10] 2026-03-14 16:35:07,859 [wrapper] cleanup supervisor_pilot 16624 4907
[2026-03-14 17:35:10] 2026-03-14 16:35:07,951 [wrapper] Test setup, not cleaning
[2026-03-14 17:35:10] 2026-03-14 16:35:08,007 [wrapper] apfmon messages muted
[2026-03-14 17:35:10] 2026-03-14 16:35:08,051 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:35:10] 2026-03-14 16:35:08,125 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:35:10]  *** Error codes and diagnostics ***
[2026-03-14 17:35:10]     "exeErrorCode": 0,
[2026-03-14 17:35:10]     "exeErrorDiag": "",
[2026-03-14 17:35:10]     "pilotErrorCode": 0,
[2026-03-14 17:35:10]     "pilotErrorDiag": "",
[2026-03-14 17:35:10]  *** Listing of results directory ***
[2026-03-14 17:35:10] total 614300
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-14 17:35:10] -rwx------. 1 boinc boinc     36322 Mar 14 01:51 runpilot2-wrapper.sh
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc      5111 Mar 14 01:52 queuedata.json
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc       100 Mar 14 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:35:10] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 13:54 run_atlas
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc       105 Mar 14 13:54 job.xml
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc      6391 Mar 14 13:54 init_data.xml
[2026-03-14 17:35:10] -rw-r--r--. 2 boinc boinc 435234164 Mar 14 13:54 EVNT.46701403._001721.pool.root.1
[2026-03-14 17:35:10] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:54 start_atlas.sh
[2026-03-14 17:35:10] drwxrwx--x. 2 boinc boinc        68 Mar 14 13:54 shared
[2026-03-14 17:35:10] -rw-r--r--. 2 boinc boinc    597535 Mar 14 13:54 input.tar.gz
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc         0 Mar 14 13:54 boinc_lockfile
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc      2563 Mar 14 13:55 pandaJob.out
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc       413 Mar 14 14:00 workernode_map.json
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc   1004579 Mar 14 14:00 agis_schedconf.cvmfs.json
[2026-03-14 17:35:10] drwx------. 5 boinc boinc      4096 Mar 14 14:00 pilot3
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc 185391066 Mar 14 17:33 HITS.48955010._036318.pool.root.1
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc       532 Mar 14 17:33 boinc_task_state.xml
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc      1013 Mar 14 17:34 memory_monitor_summary.json
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc   1511579 Mar 14 17:34 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc    452373 Mar 14 17:34 log.48955010._036318.job.log.tgz.1
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc      6320 Mar 14 17:34 heartbeat.json
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc        95 Mar 14 17:34 pilot_heartbeat.json
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc      4879 Mar 14 17:35 pilotlog.txt
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc   1795377 Mar 14 17:35 log.48955010._036318.job.log.1
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc       357 Mar 14 17:35 output.list
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc       620 Mar 14 17:35 runtime_log
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc   2263040 Mar 14 17:35 result.tar.gz
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc      8816 Mar 14 17:35 runtime_log.err
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc       654 Mar 14 17:35 pUtNDmqOSL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYQrLDmhkvojm.diag
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc        28 Mar 14 17:35 wrapper_checkpoint.txt
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc      8192 Mar 14 17:35 boinc_mmap_file
[2026-03-14 17:35:10] -rw-r--r--. 1 boinc boinc     20909 Mar 14 17:35 stderr.txt
[2026-03-14 17:35:10] HITS file was successfully produced:
[2026-03-14 17:35:10] -rw-------. 1 boinc boinc 185391066 Mar 14 17:33 shared/HITS.pool.root.1
[2026-03-14 17:35:10]  *** Contents of shared directory: ***
[2026-03-14 17:35:11] total 608896
[2026-03-14 17:35:11] -rw-r--r--. 2 boinc boinc 435234164 Mar 14 13:54 ATLAS.root_0
[2026-03-14 17:35:11] -rw-r--r--. 2 boinc boinc     15845 Mar 14 13:54 start_atlas.sh
[2026-03-14 17:35:11] -rw-r--r--. 2 boinc boinc    597535 Mar 14 13:54 input.tar.gz
[2026-03-14 17:35:11] -rw-------. 1 boinc boinc 185391066 Mar 14 17:33 HITS.pool.root.1
[2026-03-14 17:35:11] -rw-------. 1 boinc boinc   2263040 Mar 14 17:35 result.tar.gz
17:35:12 (801): run_atlas exited; CPU time 48856.054593
17:35:12 (801): called boinc_finish(0)

</stderr_txt>
]]>

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