Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:18:14 (2804839): wrapper (7.7.26015): starting
06:18:14 (2804839): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 06:18:14] Arguments: --nthreads 4
[2026-03-15 06:18:14] Threads: 4
[2026-03-15 06:18:14] Checking for CVMFS
[2026-03-15 06:18:14] No cvmfs_config command found, will try listing directly
[2026-03-15 06:18:14] CVMFS is ok
[2026-03-15 06:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 06:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 06:18:14] Further information can be found at the LHC@home message board.
[2026-03-15 06:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 06:18:14] Checking for apptainer binary...
[2026-03-15 06:18:14] which: no apptainer in ((null))
[2026-03-15 06:18:14] apptainer is not installed, using version from CVMFS
[2026-03-15 06:18:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 06:18:15] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot148/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 06:18:15] apptainer works
[2026-03-15 06:18:15] Set ATHENA_PROC_NUMBER=4
[2026-03-15 06:18:15] Set ATHENA_CORE_NUMBER=4
[2026-03-15 06:18:15] Starting ATLAS job with PandaID=7045292582
[2026-03-15 06:18:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot148/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 07:36:41]  *** The last 200 lines of the pilot log: ***
[2026-03-15 07:36:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 07:36:41]  is_altstaged=None
[2026-03-15 07:36:41]  is_tar=False
[2026-03-15 07:36:41]  lfn=log.48955010._036026.job.log.tgz.1
[2026-03-15 07:36:41]  mtime=0
[2026-03-15 07:36:41]  protocol_id=None
[2026-03-15 07:36:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 07:36:41]  replicas=None
[2026-03-15 07:36:41]  scope=mc23_13p6TeV
[2026-03-15 07:36:41]  status=None
[2026-03-15 07:36:41]  status_code=0
[2026-03-15 07:36:41]  storage_token=
[2026-03-15 07:36:41]  surl=/var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7045292582/log.48955010._036026.job.log.tgz.1
[2026-03-15 07:36:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/fb/log.48955010._036026.job.log.tgz.1
[2026-03-15 07:36:41]  workdir=None
[2026-03-15 07:36:41] ]
[2026-03-15 07:36:41] 2026-03-15 06:35:32,793 | INFO     | transferring file log.48955010._036026.job.log.tgz.1 from /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7045292582/log.48955010._036026.job.log.tgz.1 to /var/lib/
[2026-03-15 07:36:41] 2026-03-15 06:35:32,793 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7045292582/log.48955010._036026.job.log.tgz.1 /var/lib/boinc/var/slot148/slots/0/
[2026-03-15 07:36:41] 2026-03-15 06:35:32,810 | INFO     | adding to output.list: log.48955010._036026.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/fb/log.48955010._036026.job.log.tg
[2026-03-15 07:36:41] 2026-03-15 06:35:32,811 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 07:36:41] 2026-03-15 06:35:32,811 | INFO     | summary of transferred files:
[2026-03-15 07:36:41] 2026-03-15 06:35:32,811 | INFO     |  -- lfn=log.48955010._036026.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 07:36:41] 2026-03-15 06:35:32,811 | INFO     | stage-out finished correctly
[2026-03-15 07:36:41] 2026-03-15 06:35:33,179 | INFO     | monitor loop #334: job 0:7045292582 is in state 'finished'
[2026-03-15 07:36:41] 2026-03-15 06:35:33,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 07:36:41] 2026-03-15 06:35:33,417 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 07:36:41] 2026-03-15 06:35:34,764 | INFO     | time since job start (4627s) is within the limit (345600.0s)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,682 | INFO     | monitor loop #335: job 0:7045292582 is in state 'finished'
[2026-03-15 07:36:41] 2026-03-15 06:35:35,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,783 | INFO     | job 7045292582 has state=finished
[2026-03-15 07:36:41] 2026-03-15 06:35:35,783 | INFO     | preparing for final server update for job 7045292582 in state='finished'
[2026-03-15 07:36:41] 2026-03-15 06:35:35,784 | INFO     | reading metadata from: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7045292582/jobReport.json
[2026-03-15 07:36:41] 2026-03-15 06:35:35,785 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot148/slots/0/workernode_map.json
[2026-03-15 07:36:41] 2026-03-15 06:35:35,785 | INFO     | this job has now completed (state=finished)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,785 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,786 | INFO     | log transfer has been attempted: DONE
[2026-03-15 07:36:41] 2026-03-15 06:35:35,786 | INFO     | job 7045292582 has finished - writing final server update
[2026-03-15 07:36:41] 2026-03-15 06:35:35,786 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1510003/.job.ad'
[2026-03-15 07:36:41] 2026-03-15 06:35:35,786 | INFO     | total number of processed events: 400 (read)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,804 | INFO     | using path: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7045292582/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,804 | INFO     | extracted standard info from prmon json
[2026-03-15 07:36:41] 2026-03-15 06:35:35,804 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 07:36:41] 2026-03-15 06:35:35,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 07:36:41] 2026-03-15 06:35:35,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 07:36:41] 2026-03-15 06:35:35,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | fitting pss+swap vs Time
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | sum of square deviations: 101843770.0
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | sum of deviations: -484223673.0
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | mean x: 1773554308.0
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | mean y: 2332730.9420289854
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | intersect: 8434826748.835645
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | chi2: 0.00022602679629513776
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | current memory leak: -4.75 B/s (using 69 data points, chi2=0.00)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | could have reported an average CPU frequency of 3583 MHz (6 samples)
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | ..............................
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | . Timing measurements:
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | . get job = 0 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | . initial setup = 5 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,806 | INFO     | . payload setup = 5 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,807 | INFO     | . stage-in = 0 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,807 | INFO     | . payload execution = 4604 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,807 | INFO     | . stage-out = 0 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,807 | INFO     | . log creation = 0 s
[2026-03-15 07:36:41] 2026-03-15 06:35:35,807 | INFO     | ..............................
[2026-03-15 07:36:41] 2026-03-15 06:35:36,288 | INFO     | 
[2026-03-15 07:36:41] 2026-03-15 06:35:36,288 | INFO     | job summary report
[2026-03-15 07:36:41] 2026-03-15 06:35:36,288 | INFO     | --------------------------------------------------
[2026-03-15 07:36:41] 2026-03-15 06:35:36,288 | INFO     | PanDA job id: 7045292582
[2026-03-15 07:36:41] 2026-03-15 06:35:36,288 | INFO     | task id: 48955010
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | errors: (none)
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | pilot state: finished 
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | transexitcode: 0
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | exeerrorcode: 0
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | exeerrordiag: 
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | exitcode: 0
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | exitmsg: OK
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | cpuconsumptiontime: 17661 s
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | nevents: 400
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | neventsw: 0
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | pid: 2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | pgrp: 2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | corecount: 4
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | event service: False
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | sizes: {0: 2280193, 11: 2280193, 4613: 2306452, 4614: 2315530, 4617: 2315668}
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | --------------------------------------------------
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | 
[2026-03-15 07:36:41] 2026-03-15 06:35:36,289 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot148/slots/0
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | job 7045292582 has completed (purged errors)
[2026-03-15 07:36:41] 2026-03-15 06:35:36,310 | INFO     | overall cleanup function is called
[2026-03-15 07:36:41] 2026-03-15 06:35:37,317 | INFO     | --- collectZombieJob: --- 10, [2838008]
[2026-03-15 07:36:41] 2026-03-15 06:35:37,317 | INFO     | zombie collector waiting for pid 2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:37,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 07:36:41] 2026-03-15 06:35:37,317 | INFO     | collected zombie processes
[2026-03-15 07:36:41] 2026-03-15 06:35:37,317 | INFO     | will attempt to kill all subprocesses of pid=2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:37,805 | INFO     | process IDs to be killed: [2838008] (in reverse order)
[2026-03-15 07:36:41] 2026-03-15 06:35:38,045 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 07:36:41] 2026-03-15 06:35:38,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 07:36:41] 2026-03-15 06:35:38,078 | INFO     | did not find any defunct processes belonging to 2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:38,110 | INFO     | did not find any defunct processes belonging to 2838008
[2026-03-15 07:36:41] 2026-03-15 06:35:38,110 | INFO     | ready for new job
[2026-03-15 07:36:41] 2026-03-15 06:35:38,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 07:36:41] 2026-03-15 06:35:38,112 | INFO     | **************************************
[2026-03-15 07:36:41] 2026-03-15 06:35:38,112 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 07:36:41] 2026-03-15 06:35:38,112 | INFO     | **************************************
[2026-03-15 07:36:41] 2026-03-15 06:35:38,112 | INFO     | 
[2026-03-15 07:36:41] 2026-03-15 06:35:38,124 | INFO     | architecture information:
[2026-03-15 07:36:41] 2026-03-15 06:35:38,124 | INFO     | executing command: cat /etc/os-release
[2026-03-15 07:36:41] 2026-03-15 06:35:38,137 | INFO     | cat /etc/os-release:
[2026-03-15 07:36:41] NAME="CentOS Linux"
[2026-03-15 07:36:41] VERSION="7 (Core)"
[2026-03-15 07:36:41] ID="centos"
[2026-03-15 07:36:41] ID_LIKE="rhel fedora"
[2026-03-15 07:36:41] VERSION_ID="7"
[2026-03-15 07:36:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 07:36:41] ANSI_COLOR="0;31"
[2026-03-15 07:36:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 07:36:41] HOME_URL="https://www.centos.org/"
[2026-03-15 07:36:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 07:36:41] 
[2026-03-15 07:36:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 07:36:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 07:36:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 07:36:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 07:36:41] 
[2026-03-15 07:36:41] 2026-03-15 06:35:38,137 | INFO     | **************************************
[2026-03-15 07:36:41] 2026-03-15 06:35:38,640 | INFO     | executing command: df -mP /var/lib/boinc/var/slot148/slots/0
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | INFO     | sufficient remaining disk space (58356400128 B)
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | INFO     | update_server=False
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 07:36:41] 2026-03-15 06:35:38,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 07:36:41] 2026-03-15 06:35:38,809 | INFO     | all data control threads have been joined
[2026-03-15 07:36:41] 2026-03-15 06:35:39,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 07:36:41] 2026-03-15 06:35:39,190 | INFO     | aborting loop
[2026-03-15 07:36:41] 2026-03-15 06:35:39,306 | INFO     | all job control threads have been joined
[2026-03-15 07:36:41] 2026-03-15 06:35:39,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 07:36:41] 2026-03-15 06:35:39,663 | INFO     | [job] retrieve thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:39,704 | INFO     | all payload control threads have been joined
[2026-03-15 07:36:41] 2026-03-15 06:35:39,764 | INFO     | [payload] failed_post thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:39,814 | INFO     | [data] control thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,195 | INFO     | [job] job monitor thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,254 | INFO     | [job] validate thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,312 | INFO     | [job] control thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,464 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,486 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,618 | INFO     | [data] copytool_in thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,663 | INFO     | [data] copytool_out thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,710 | INFO     | [payload] control thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,738 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:40,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 07:36:41] 2026-03-15 06:35:40,990 | INFO     | [payload] validate_post thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:41,871 | INFO     | [job] queue monitor thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:43,486 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:35:49,197 | INFO     | job.realtimelogging is not enabled
[2026-03-15 07:36:41] 2026-03-15 06:35:50,202 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 07:36:41] 2026-03-15 06:36:08,413 | INFO     | PID=2816142 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 07:36:41] 2026-03-15 06:36:08,414 | INFO     | .. there are 48 such processes running
[2026-03-15 07:36:41] 2026-03-15 06:36:08,414 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 07:36:41] 2026-03-15 06:36:08,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 07:36:41] 2026-03-15 06:36:08,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 07:36:41] 2026-03-15 06:36:35,131 | INFO     | [monitor] cgroup control has ended
[2026-03-15 07:36:41] 2026-03-15 06:36:36,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23170908809024)>', '<ExcThread(monitor, started 23170597754624)>']
[2026-03-15 07:36:41] 2026-03-15 06:36:36,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 07:36:41] 2026-03-15 06:36:36,554 | INFO     | [monitor] control thread has ended
[2026-03-15 07:36:41] 2026-03-15 06:36:41,373 | INFO     | all workflow threads have been joined
[2026-03-15 07:36:41] 2026-03-15 06:36:41,373 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 07:36:41] 2026-03-15 06:36:41,373 | INFO     | traces error code: 0
[2026-03-15 07:36:41] 2026-03-15 06:36:41,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 07:36:41] 2026-03-15 06:36:41,567 [wrapper] ==== pilot stdout END ====
[2026-03-15 07:36:41] 2026-03-15 06:36:41,569 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 07:36:41] 2026-03-15 06:36:41,571 [wrapper] pilotpid: 2816142
[2026-03-15 07:36:41] 2026-03-15 06:36:41,573 [wrapper] Pilot exit status: 0
[2026-03-15 07:36:41] 2026-03-15 06:36:41,582 [wrapper] pandaids: 7045292582
[2026-03-15 07:36:41] 2026-03-15 06:36:41,718 [wrapper] cleanup supervisor_pilot 3565128 2816143
[2026-03-15 07:36:41] 2026-03-15 06:36:41,720 [wrapper] Test setup, not cleaning
[2026-03-15 07:36:41] 2026-03-15 06:36:41,723 [wrapper] apfmon messages muted
[2026-03-15 07:36:41] 2026-03-15 06:36:41,725 [wrapper] ==== wrapper stdout END ====
[2026-03-15 07:36:41] 2026-03-15 06:36:41,727 [wrapper] ==== wrapper stderr END ====
[2026-03-15 07:36:41]  *** Error codes and diagnostics ***
[2026-03-15 07:36:41]     "exeErrorCode": 0,
[2026-03-15 07:36:41]     "exeErrorDiag": "",
[2026-03-15 07:36:41]     "pilotErrorCode": 0,
[2026-03-15 07:36:41]     "pilotErrorDiag": "",
[2026-03-15 07:36:41]  *** Listing of results directory ***
[2026-03-15 07:36:41] total 609528
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc    585013 Mar 14 00:38 pilot3.tar.gz
[2026-03-15 07:36:41] -rwx------. 1 boinc boinc     36322 Mar 14 00:41 runpilot2-wrapper.sh
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc      5111 Mar 14 00:44 queuedata.json
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc       100 Mar 15 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 07:36:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 06:18 run_atlas
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc       105 Mar 15 06:18 job.xml
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc     15845 Mar 15 06:18 start_atlas.sh
[2026-03-15 07:36:41] drwxrwx--x. 2 boinc boinc      4096 Mar 15 06:18 shared
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc    597530 Mar 15 06:18 input.tar.gz
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc      6709 Mar 15 06:18 init_data.xml
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc 439314667 Mar 15 06:18 EVNT.46701403._001715.pool.root.1
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc         0 Mar 15 06:18 boinc_lockfile
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc      2564 Mar 15 06:18 pandaJob.out
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc   1006481 Mar 15 06:18 agis_schedconf.cvmfs.json
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc   1511579 Mar 15 06:18 agis_ddmendpoints.agis.ALL.json
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc       445 Mar 15 06:18 workernode_map.json
[2026-03-15 07:36:41] drwx------. 5 boinc boinc      4096 Mar 15 06:18 pilot3
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc 178950150 Mar 15 07:35 HITS.48955010._036026.pool.root.1
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc       530 Mar 15 07:35 boinc_task_state.xml
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc      1029 Mar 15 07:35 memory_monitor_summary.json
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc    294754 Mar 15 07:35 log.48955010._036026.job.log.tgz.1
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc      6356 Mar 15 07:35 heartbeat.json
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc        95 Mar 15 07:36 pilot_heartbeat.json
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc        27 Mar 15 07:36 wrapper_checkpoint.txt
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc      8192 Mar 15 07:36 boinc_mmap_file
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc      4902 Mar 15 07:36 pilotlog.txt
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc    680555 Mar 15 07:36 log.48955010._036026.job.log.1
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc       357 Mar 15 07:36 output.list
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc       620 Mar 15 07:36 runtime_log
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc    993280 Mar 15 07:36 result.tar.gz
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc      9221 Mar 15 07:36 runtime_log.err
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc       662 Mar 15 07:36 7NSLDmOJRL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvLrLDmuaExGm.diag
[2026-03-15 07:36:41] -rw-r--r--. 1 boinc boinc     21292 Mar 15 07:36 stderr.txt
[2026-03-15 07:36:41] HITS file was successfully produced:
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc 178950150 Mar 15 07:35 shared/HITS.pool.root.1
[2026-03-15 07:36:41]  *** Contents of shared directory: ***
[2026-03-15 07:36:41] total 605360
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc     15845 Mar 15 06:18 start_atlas.sh
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc    597530 Mar 15 06:18 input.tar.gz
[2026-03-15 07:36:41] -rw-r--r--. 2 boinc boinc 439314667 Mar 15 06:18 ATLAS.root_0
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc 178950150 Mar 15 07:35 HITS.pool.root.1
[2026-03-15 07:36:41] -rw-------. 1 boinc boinc    993280 Mar 15 07:36 result.tar.gz
07:36:42 (2804839): run_atlas exited; CPU time 17863.178973
07:36:42 (2804839): called boinc_finish(0)

</stderr_txt>
]]>

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