Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:15:21 (300200): wrapper (7.7.26015): starting
21:15:21 (300200): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 21:15:21] Arguments: --nthreads 3
[2026-03-14 21:15:21] Threads: 3
[2026-03-14 21:15:21] Checking for CVMFS
[2026-03-14 21:15:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 21:15:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 21:15:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 21:15:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 21:15:22] 2.9.2.0 2962 2025 63124 157289 3 9 22592256 36864001 0 130560 0 838177 99.983 80597 13841 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 21:15:22] CVMFS is ok
[2026-03-14 21:15:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 21:15:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 21:15:22] Further information can be found at the LHC@home message board.
[2026-03-14 21:15:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 21:15:22] Checking for apptainer binary...
[2026-03-14 21:15:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 21:15:22] Running /usr/bin/apptainer --version
[2026-03-14 21:15:22] apptainer version 1.4.1-1.1
[2026-03-14 21:15:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 21:15:22] cosA121
[2026-03-14 21:15:22] apptainer works
[2026-03-14 21:15:22] Set ATHENA_PROC_NUMBER=3
[2026-03-14 21:15:22] Set ATHENA_CORE_NUMBER=3
[2026-03-14 21:15:22] Starting ATLAS job with PandaID=7046197788
[2026-03-14 21:15:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 22:39:46]  *** The last 200 lines of the pilot log: ***
[2026-03-14 22:39:46] 2026-03-14 21:39:01,464 | INFO     | update_server=False
[2026-03-14 22:39:46] 2026-03-14 21:39:01,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 22:39:46] 2026-03-14 21:39:01,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:39:46] 2026-03-14 21:39:01,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 22:39:46] 2026-03-14 21:39:01,528 | INFO     | all data control threads have been joined
[2026-03-14 22:39:46] 2026-03-14 21:39:01,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 22:39:46] 2026-03-14 21:39:01,925 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 22:39:46] 2026-03-14 21:39:01,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 22:39:46] 2026-03-14 21:39:01,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:39:46] 2026-03-14 21:39:01,926 | INFO     | will abort loop
[2026-03-14 22:39:46] 2026-03-14 21:39:01,937 | INFO     | all job control threads have been joined
[2026-03-14 22:39:46] 2026-03-14 21:39:02,138 | INFO     | all payload control threads have been joined
[2026-03-14 22:39:46] 2026-03-14 21:39:02,469 | INFO     | [job] retrieve thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:02,470 | INFO     | [job] queue monitor thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:02,533 | INFO     | [data] control thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:02,932 | INFO     | [job] job monitor thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:02,943 | INFO     | [job] control thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,102 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,144 | INFO     | [payload] control thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,321 | INFO     | [payload] failed_post thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,668 | INFO     | [job] validate thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,716 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,779 | INFO     | [data] copytool_out thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,798 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,823 | INFO     | [payload] validate_post thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:03,842 | INFO     | [data] copytool_in thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:04,044 | INFO     | job.realtimelogging is not enabled
[2026-03-14 22:39:46] 2026-03-14 21:39:05,050 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:05,471 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 22:39:46] 2026-03-14 21:39:31,126 | INFO     | PID=304263 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 22:39:46] 2026-03-14 21:39:31,126 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 22:39:46] 2026-03-14 21:39:31,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 22:39:46] 2026-03-14 21:39:31,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 22:39:46] 2026-03-14 21:39:40,644 | INFO     | [monitor] cgroup control has ended
[2026-03-14 22:39:46] 2026-03-14 21:39:41,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490981070656)>', '<ExcThread(monitor, started 140490108294912)>']
[2026-03-14 22:39:46] 2026-03-14 21:39:42,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 22:39:46] 2026-03-14 21:39:42,185 | INFO     | [monitor] control thread has ended
[2026-03-14 22:39:46] 2026-03-14 21:39:46,538 | INFO     | all workflow threads have been joined
[2026-03-14 22:39:46] 2026-03-14 21:39:46,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 22:39:46] 2026-03-14 21:39:46,539 | INFO     | traces error code: 0
[2026-03-14 22:39:46] 2026-03-14 21:39:46,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 22:39:46] 2026-03-14 21:39:46,586 [wrapper] ==== pilot stdout END ====
[2026-03-14 22:39:46] 2026-03-14 21:39:46,589 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 22:39:46] 2026-03-14 21:39:46,592 [wrapper] pilotpid: 304263
[2026-03-14 22:39:46] 2026-03-14 21:39:46,595 [wrapper] Pilot exit status: 0
[2026-03-14 22:39:46] 2026-03-14 21:39:46,603 [wrapper] pandaids: 7046197788
[2026-03-14 22:39:46] 2026-03-14 21:39:46,620 [wrapper] cleanup supervisor_pilot  314335 304264
[2026-03-14 22:39:46] 2026-03-14 21:39:46,623 [wrapper] Test setup, not cleaning
[2026-03-14 22:39:46] 2026-03-14 21:39:46,625 [wrapper] apfmon messages muted
[2026-03-14 22:39:46] 2026-03-14 21:39:46,628 [wrapper] ==== wrapper stdout END ====
[2026-03-14 22:39:46] 2026-03-14 21:39:46,630 [wrapper] ==== wrapper stderr END ====
[2026-03-14 22:39:46]  *** Error codes and diagnostics ***
[2026-03-14 22:39:46]     "exeErrorCode": 0,
[2026-03-14 22:39:46]     "exeErrorDiag": "",
[2026-03-14 22:39:46]     "pilotErrorCode": 0,
[2026-03-14 22:39:46]     "pilotErrorDiag": "",
[2026-03-14 22:39:46]  *** Listing of results directory ***
[2026-03-14 22:39:46] total 606936
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc    585013 Mar 14 05:19 pilot3.tar.gz
[2026-03-14 22:39:46] -rwx------ 1 boinc boinc     36322 Mar 14 05:24 runpilot2-wrapper.sh
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      5111 Mar 14 05:25 queuedata.json
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc       100 Mar 14 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 22:39:46] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 21:15 run_atlas
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc       105 Mar 14 21:15 job.xml
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc 436124217 Mar 14 21:15 EVNT.46701403._002532.pool.root.1
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc    597538 Mar 14 21:15 input.tar.gz
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc     15845 Mar 14 21:15 start_atlas.sh
[2026-03-14 22:39:46] drwxrwx--x 2 boinc boinc      4096 Mar 14 21:15 shared
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc         0 Mar 14 21:15 boinc_setup_complete
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      6197 Mar 14 21:15 init_data.xml
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc         0 Mar 14 21:15 boinc_lockfile
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      2571 Mar 14 21:15 pandaJob.out
[2026-03-14 22:39:46] -rw------- 1 boinc boinc   1006481 Mar 14 21:15 agis_schedconf.cvmfs.json
[2026-03-14 22:39:46] -rw------- 1 boinc boinc   1511579 Mar 14 21:15 agis_ddmendpoints.agis.ALL.json
[2026-03-14 22:39:46] -rw------- 1 boinc boinc       420 Mar 14 21:15 workernode_map.json
[2026-03-14 22:39:46] drwx------ 5 boinc boinc      4096 Mar 14 21:15 pilot3
[2026-03-14 22:39:46] -rw------- 1 boinc boinc 179464368 Mar 14 22:38 HITS.48955015._023749.pool.root.1
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc       530 Mar 14 22:38 boinc_task_state.xml
[2026-03-14 22:39:46] -rw------- 1 boinc boinc      1034 Mar 14 22:38 memory_monitor_summary.json
[2026-03-14 22:39:46] -rw------- 1 boinc boinc        95 Mar 14 22:38 pilot_heartbeat.json
[2026-03-14 22:39:46] -rw------- 1 boinc boinc    264768 Mar 14 22:38 log.48955015._023749.job.log.tgz.1
[2026-03-14 22:39:46] -rw------- 1 boinc boinc      6325 Mar 14 22:38 heartbeat.json
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc        27 Mar 14 22:39 wrapper_checkpoint.txt
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      8192 Mar 14 22:39 boinc_mmap_file
[2026-03-14 22:39:46] -rw------- 1 boinc boinc      5005 Mar 14 22:39 pilotlog.txt
[2026-03-14 22:39:46] -rw------- 1 boinc boinc    732215 Mar 14 22:39 log.48955015._023749.job.log.1
[2026-03-14 22:39:46] -rw------- 1 boinc boinc       357 Mar 14 22:39 output.list
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc       620 Mar 14 22:39 runtime_log
[2026-03-14 22:39:46] -rw------- 1 boinc boinc   1013760 Mar 14 22:39 result.tar.gz
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      8901 Mar 14 22:39 runtime_log.err
[2026-03-14 22:39:46] -rw------- 1 boinc boinc       658 Mar 14 22:39 RUbKDm1iVL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmK9rLDmimv5Hm.diag
[2026-03-14 22:39:46] -rw-r--r-- 1 boinc boinc      7731 Mar 14 22:39 stderr.txt
[2026-03-14 22:39:46] HITS file was successfully produced:
[2026-03-14 22:39:46] -rw------- 1 boinc boinc 179464368 Mar 14 22:38 shared/HITS.pool.root.1
[2026-03-14 22:39:46]  *** Contents of shared directory: ***
[2026-03-14 22:39:46] total 602764
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc 436124217 Mar 14 21:15 ATLAS.root_0
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc    597538 Mar 14 21:15 input.tar.gz
[2026-03-14 22:39:46] -rw-r--r-- 2 boinc boinc     15845 Mar 14 21:15 start_atlas.sh
[2026-03-14 22:39:46] -rw------- 1 boinc boinc 179464368 Mar 14 22:38 HITS.pool.root.1
[2026-03-14 22:39:46] -rw------- 1 boinc boinc   1013760 Mar 14 22:39 result.tar.gz
22:39:48 (300200): run_atlas exited; CPU time 14020.090845
22:39:48 (300200): called boinc_finish(0)

</stderr_txt>
]]>

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