Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:14:29 (26718): wrapper (7.7.26015): starting
06:14:29 (26718): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 06:14:29] Arguments: --nthreads 12
[2026-03-14 06:14:29] Threads: 12
[2026-03-14 06:14:29] Checking for CVMFS
[2026-03-14 06:14:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 06:14:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 06:14:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 06:14:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 06:14:30] 2.11.2.0 2913 443068 91384 157272 2 50 18154005 20275200 1 130560 1 192143714 99.951 25889326 16966 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 06:14:30] CVMFS is ok
[2026-03-14 06:14:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 06:14:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 06:14:30] Further information can be found at the LHC@home message board.
[2026-03-14 06:14:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 06:14:30] Checking for apptainer binary...
[2026-03-14 06:14:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 06:14:30] Running /usr/bin/apptainer --version
[2026-03-14 06:14:30] apptainer version 1.3.2-1.el7
[2026-03-14 06:14:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 06:14:31] c-205-6.aglt2.org
[2026-03-14 06:14:31] apptainer works
[2026-03-14 06:14:31] Set ATHENA_PROC_NUMBER=12
[2026-03-14 06:14:31] Set ATHENA_CORE_NUMBER=12
[2026-03-14 06:14:32] Starting ATLAS job with PandaID=7046259342
[2026-03-14 06:14:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 07:22:03]  *** The last 200 lines of the pilot log: ***
[2026-03-14 07:22:03]  domain=
[2026-03-14 07:22:03]  filesize=363275
[2026-03-14 07:22:03]  filetype=log
[2026-03-14 07:22:03]  guid=aa8fe421-c902-4484-ba4a-c52a47be8247
[2026-03-14 07:22:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 07:22:03]  is_altstaged=None
[2026-03-14 07:22:03]  is_tar=False
[2026-03-14 07:22:03]  lfn=log.48955015._024130.job.log.tgz.1
[2026-03-14 07:22:03]  mtime=0
[2026-03-14 07:22:03]  protocol_id=None
[2026-03-14 07:22:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 07:22:03]  replicas=None
[2026-03-14 07:22:03]  scope=mc23_13p6TeV
[2026-03-14 07:22:03]  status=None
[2026-03-14 07:22:03]  status_code=0
[2026-03-14 07:22:03]  storage_token=
[2026-03-14 07:22:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7046259342/log.48955015._024130.job.log.tgz.1
[2026-03-14 07:22:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/82/log.48955015._024130.job.log.tgz.1
[2026-03-14 07:22:03]  workdir=None
[2026-03-14 07:22:03] ]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,136 | INFO     | transferring file log.48955015._024130.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7046259342/log.48955015._024130.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 07:22:03] 2026-03-14 11:21:22,136 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7046259342/log.48955015._024130.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._024130.job
[2026-03-14 07:22:03] 2026-03-14 11:21:22,157 | INFO     | adding to output.list: log.48955015._024130.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/82/log.48955015._024130.job.log.tg
[2026-03-14 07:22:03] 2026-03-14 11:21:22,158 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 07:22:03] 2026-03-14 11:21:22,158 | INFO     | summary of transferred files:
[2026-03-14 07:22:03] 2026-03-14 11:21:22,158 | INFO     |  -- lfn=log.48955015._024130.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 07:22:03] 2026-03-14 11:21:22,158 | INFO     | stage-out finished correctly
[2026-03-14 07:22:03] 2026-03-14 11:21:22,240 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 07:22:03] 2026-03-14 11:21:22,300 | INFO     | time since job start (3990s) is within the limit (345600.0s)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,318 | INFO     | job 7046259342 has state=finished
[2026-03-14 07:22:03] 2026-03-14 11:21:22,318 | INFO     | preparing for final server update for job 7046259342 in state='finished'
[2026-03-14 07:22:03] 2026-03-14 11:21:22,319 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7046259342/jobReport.json
[2026-03-14 07:22:03] 2026-03-14 11:21:22,321 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 07:22:03] 2026-03-14 11:21:22,322 | INFO     | this job has now completed (state=finished)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,322 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,322 | INFO     | log transfer has been attempted: DONE
[2026-03-14 07:22:03] 2026-03-14 11:21:22,322 | INFO     | job 7046259342 has finished - writing final server update
[2026-03-14 07:22:03] 2026-03-14 11:21:22,323 | INFO     | total number of processed events: 400 (read)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7046259342/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,326 | INFO     | extracted standard info from prmon json
[2026-03-14 07:22:03] 2026-03-14 11:21:22,326 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 07:22:03] 2026-03-14 11:21:22,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 07:22:03] 2026-03-14 11:21:22,327 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 07:22:03] 2026-03-14 11:21:22,327 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | fitting pss+swap vs Time
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | sum of square deviations: 60482994.5
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | sum of deviations: 514028943.99999994
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | mean x: 1773485359.5
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | mean y: 2671565.3448275863
[2026-03-14 07:22:03] 2026-03-14 11:21:22,329 | INFO     | intersect: -15069710582.388372
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | chi2: 0.008063723136320438
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | current memory leak: 8.50 B/s (using 58 data points, chi2=0.01)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | ..............................
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | . Timing measurements:
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | . get job = 0 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,330 | INFO     | . initial setup = 7 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | . payload setup = 7 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | . stage-in = 0 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | . payload execution = 3965 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | . stage-out = 0 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | . log creation = 0 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,331 | INFO     | ..............................
[2026-03-14 07:22:03] 2026-03-14 11:21:22,719 | INFO     | 
[2026-03-14 07:22:03] 2026-03-14 11:21:22,719 | INFO     | job summary report
[2026-03-14 07:22:03] 2026-03-14 11:21:22,719 | INFO     | --------------------------------------------------
[2026-03-14 07:22:03] 2026-03-14 11:21:22,719 | INFO     | PanDA job id: 7046259342
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | task id: 48955015
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | errors: (none)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | pilot state: finished 
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | transexitcode: 0
[2026-03-14 07:22:03] 2026-03-14 11:21:22,720 | INFO     | exeerrorcode: 0
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | exeerrordiag: 
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | exitcode: 0
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | exitmsg: OK
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | cpuconsumptiontime: 43214 s
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | nevents: 400
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | neventsw: 0
[2026-03-14 07:22:03] 2026-03-14 11:21:22,721 | INFO     | pid: 2951
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | pgrp: 2951
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | corecount: 12
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | event service: False
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | sizes: {0: 2280234, 11: 2280234, 3976: 2306060, 3978: 2315252}
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | --------------------------------------------------
[2026-03-14 07:22:03] 2026-03-14 11:21:22,722 | INFO     | 
[2026-03-14 07:22:03] 2026-03-14 11:21:22,723 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 07:22:03] 2026-03-14 11:21:22,746 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 07:22:03] 2026-03-14 11:21:22,749 | INFO     | job 7046259342 has completed (purged errors)
[2026-03-14 07:22:03] 2026-03-14 11:21:22,750 | INFO     | overall cleanup function is called
[2026-03-14 07:22:03] 2026-03-14 11:21:23,418 | INFO     | PID=30689 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 07:22:03] 2026-03-14 11:21:23,757 | INFO     | --- collectZombieJob: --- 10, [2951]
[2026-03-14 07:22:03] 2026-03-14 11:21:23,758 | INFO     | zombie collector waiting for pid 2951
[2026-03-14 07:22:03] 2026-03-14 11:21:23,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 07:22:03] 2026-03-14 11:21:23,758 | INFO     | collected zombie processes
[2026-03-14 07:22:03] 2026-03-14 11:21:23,758 | INFO     | will attempt to kill all subprocesses of pid=2951
[2026-03-14 07:22:03] 2026-03-14 11:21:23,845 | INFO     | process IDs to be killed: [2951] (in reverse order)
[2026-03-14 07:22:03] 2026-03-14 11:21:23,895 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 07:22:03] 2026-03-14 11:21:23,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 07:22:03] 2026-03-14 11:21:23,899 | INFO     | did not find any defunct processes belonging to 2951
[2026-03-14 07:22:03] 2026-03-14 11:21:23,901 | INFO     | did not find any defunct processes belonging to 2951
[2026-03-14 07:22:03] 2026-03-14 11:21:23,901 | INFO     | ready for new job
[2026-03-14 07:22:03] 2026-03-14 11:21:23,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 07:22:03] 2026-03-14 11:21:23,903 | INFO     | **************************************
[2026-03-14 07:22:03] 2026-03-14 11:21:23,903 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 07:22:03] 2026-03-14 11:21:23,903 | INFO     | **************************************
[2026-03-14 07:22:03] 2026-03-14 11:21:23,903 | INFO     | 
[2026-03-14 07:22:03] 2026-03-14 11:21:23,903 | INFO     | architecture information:
[2026-03-14 07:22:03] 2026-03-14 11:21:23,904 | INFO     | executing command: cat /etc/os-release
[2026-03-14 07:22:03] 2026-03-14 11:21:23,920 | INFO     | cat /etc/os-release:
[2026-03-14 07:22:03] NAME="CentOS Linux"
[2026-03-14 07:22:03] VERSION="7 (Core)"
[2026-03-14 07:22:03] ID="centos"
[2026-03-14 07:22:03] ID_LIKE="rhel fedora"
[2026-03-14 07:22:03] VERSION_ID="7"
[2026-03-14 07:22:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 07:22:03] ANSI_COLOR="0;31"
[2026-03-14 07:22:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 07:22:03] HOME_URL="https://www.centos.org/"
[2026-03-14 07:22:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 07:22:03] 
[2026-03-14 07:22:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 07:22:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 07:22:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 07:22:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 07:22:03] 
[2026-03-14 07:22:03] 2026-03-14 11:21:23,921 | INFO     | **************************************
[2026-03-14 07:22:03] 2026-03-14 11:21:24,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 07:22:03] 2026-03-14 11:21:24,440 | INFO     | sufficient remaining disk space (28900851712 B)
[2026-03-14 07:22:03] 2026-03-14 11:21:24,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 07:22:03] 2026-03-14 11:21:24,441 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 07:22:03] 2026-03-14 11:21:24,441 | INFO     | update_server=False
[2026-03-14 07:22:03] 2026-03-14 11:21:24,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 07:22:03] 2026-03-14 11:21:24,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 07:22:03] 2026-03-14 11:21:24,456 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 07:22:03] 2026-03-14 11:21:24,456 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 07:22:03] 2026-03-14 11:21:24,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:22:03] 2026-03-14 11:21:24,456 | INFO     | will abort loop
[2026-03-14 07:22:03] 2026-03-14 11:21:24,509 | INFO     | all data control threads have been joined
[2026-03-14 07:22:03] 2026-03-14 11:21:24,614 | INFO     | all payload control threads have been joined
[2026-03-14 07:22:03] 2026-03-14 11:21:25,222 | INFO     | all job control threads have been joined
[2026-03-14 07:22:03] 2026-03-14 11:21:25,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 07:22:03] 2026-03-14 11:21:25,447 | INFO     | [job] retrieve thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,462 | INFO     | [job] job monitor thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,515 | INFO     | [data] control thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,618 | INFO     | [payload] control thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,635 | INFO     | [payload] failed_post thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,737 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:25,745 | INFO     | [data] copytool_in thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,194 | INFO     | [payload] validate_post thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,228 | INFO     | [job] control thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,797 | INFO     | [job] validate thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,865 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:26,873 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:27,251 | INFO     | [data] copytool_out thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:27,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 07:22:03] 2026-03-14 11:21:28,422 | INFO     | [job] queue monitor thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:28,447 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 07:22:03] 2026-03-14 11:21:55,615 | INFO     | PID=30689 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 07:22:03] 2026-03-14 11:21:55,616 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 07:22:03] 2026-03-14 11:21:55,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 07:22:03] 2026-03-14 11:21:55,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 07:22:03] 2026-03-14 11:21:58,132 | INFO     | [monitor] cgroup control has ended
[2026-03-14 07:22:03] 2026-03-14 11:21:58,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885489858368)>', '<ExcThread(monitor, started 139884417226496)>']
[2026-03-14 07:22:03] 2026-03-14 11:21:58,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 07:22:03] 2026-03-14 11:21:58,632 | INFO     | [monitor] control thread has ended
[2026-03-14 07:22:03] 2026-03-14 11:22:03,407 | INFO     | all workflow threads have been joined
[2026-03-14 07:22:03] 2026-03-14 11:22:03,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 07:22:03] 2026-03-14 11:22:03,408 | INFO     | traces error code: 0
[2026-03-14 07:22:03] 2026-03-14 11:22:03,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 07:22:03] 2026-03-14 11:22:03,499 [wrapper] ==== pilot stdout END ====
[2026-03-14 07:22:03] 2026-03-14 11:22:03,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 07:22:03] 2026-03-14 11:22:03,506 [wrapper] pilotpid: 30689
[2026-03-14 07:22:03] 2026-03-14 11:22:03,510 [wrapper] Pilot exit status: 0
[2026-03-14 07:22:03] 2026-03-14 11:22:03,525 [wrapper] pandaids: 7046259342
[2026-03-14 07:22:03] 2026-03-14 11:22:03,563 [wrapper] cleanup supervisor_pilot 21167 30690
[2026-03-14 07:22:03] 2026-03-14 11:22:03,567 [wrapper] Test setup, not cleaning
[2026-03-14 07:22:03] 2026-03-14 11:22:03,571 [wrapper] apfmon messages muted
[2026-03-14 07:22:03] 2026-03-14 11:22:03,575 [wrapper] ==== wrapper stdout END ====
[2026-03-14 07:22:03] 2026-03-14 11:22:03,578 [wrapper] ==== wrapper stderr END ====
[2026-03-14 07:22:03]  *** Error codes and diagnostics ***
[2026-03-14 07:22:03]     "exeErrorCode": 0,
[2026-03-14 07:22:03]     "exeErrorDiag": "",
[2026-03-14 07:22:03]     "pilotErrorCode": 0,
[2026-03-14 07:22:03]     "pilotErrorDiag": "",
[2026-03-14 07:22:03]  *** Listing of results directory ***
[2026-03-14 07:22:03] total 617100
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas    585013 Mar 14 00:19 pilot3.tar.gz
[2026-03-14 07:22:03] -rwx------ 1 boincer umatlas     36322 Mar 14 00:21 runpilot2-wrapper.sh
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas      5111 Mar 14 00:24 queuedata.json
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas       100 Mar 14 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 07:22:03] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 06:14 run_atlas
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas       105 Mar 14 06:14 job.xml
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas 438699573 Mar 14 06:14 EVNT.46701403._002540.pool.root.1
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 06:14 start_atlas.sh
[2026-03-14 07:22:03] drwxrwx--x 2 boincer umatlas      4096 Mar 14 06:14 shared
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 06:14 input.tar.gz
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas         0 Mar 14 06:14 boinc_lockfile
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas      2570 Mar 14 06:14 pandaJob.out
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas        57 Mar 14 06:14 setup.sh.local
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas   1004579 Mar 14 06:14 agis_schedconf.cvmfs.json
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas   1511579 Mar 14 06:14 agis_ddmendpoints.agis.ALL.json
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas       433 Mar 14 06:14 workernode_map.json
[2026-03-14 07:22:03] drwx------ 5 boincer umatlas      4096 Mar 14 06:14 pilot3
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 07:19 init_data.xml
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas 187362650 Mar 14 07:20 HITS.48955015._024130.pool.root.1
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas       530 Mar 14 07:21 boinc_task_state.xml
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas      1044 Mar 14 07:21 memory_monitor_summary.json
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas    363275 Mar 14 07:21 log.48955015._024130.job.log.tgz.1
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas      6398 Mar 14 07:21 heartbeat.json
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas        27 Mar 14 07:21 wrapper_checkpoint.txt
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 07:21 boinc_mmap_file
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas        95 Mar 14 07:21 pilot_heartbeat.json
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas      4928 Mar 14 07:22 pilotlog.txt
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas    587220 Mar 14 07:22 log.48955015._024130.job.log.1
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas       357 Mar 14 07:22 output.list
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas       620 Mar 14 07:22 runtime_log
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas    972800 Mar 14 07:22 result.tar.gz
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 07:22 runtime_log.err
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas       658 Mar 14 07:22 LnxKDmxfVL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbOpLDmy40iJm.diag
[2026-03-14 07:22:03] -rw-r--r-- 1 boincer umatlas     21161 Mar 14 07:22 stderr.txt
[2026-03-14 07:22:03] HITS file was successfully produced:
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas 187362650 Mar 14 07:20 shared/HITS.pool.root.1
[2026-03-14 07:22:03]  *** Contents of shared directory: ***
[2026-03-14 07:22:03] total 612952
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas 438699573 Mar 14 06:14 ATLAS.root_0
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 06:14 start_atlas.sh
[2026-03-14 07:22:03] -rw-r--r-- 2 boincer umatlas    597530 Mar 14 06:14 input.tar.gz
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas 187362650 Mar 14 07:20 HITS.pool.root.1
[2026-03-14 07:22:03] -rw------- 1 boincer umatlas    972800 Mar 14 07:22 result.tar.gz
07:22:05 (26718): run_atlas exited; CPU time 43192.520168
07:22:05 (26718): called boinc_finish(0)

</stderr_txt>
]]>

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