Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:55 (12231): wrapper (7.7.26015): starting
18:42:55 (12231): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 18:42:55] Arguments: --nthreads 8
[2026-03-14 18:42:55] Threads: 8
[2026-03-14 18:42:55] Checking for CVMFS
[2026-03-14 18:42:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:42:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:42:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:43:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:43:00] 2.11.2.0 14544 127889 138236 157285 3 54 18525696 25165824 4784 130560 161 34438171 99.823 26420805 844 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 18:43:00] CVMFS is ok
[2026-03-14 18:43:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:43:00] Checking for apptainer binary...
[2026-03-14 18:43:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:43:00] Running /usr/bin/apptainer --version
[2026-03-14 18:43:01] apptainer version 1.3.2-1.el7
[2026-03-14 18:43:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:43:08] cg-vwn440.simple-grid.lan
[2026-03-14 18:43:08] apptainer works
[2026-03-14 18:43:08] Set ATHENA_PROC_NUMBER=8
[2026-03-14 18:43:08] Set ATHENA_CORE_NUMBER=8
[2026-03-14 18:43:08] Starting ATLAS job with PandaID=7045950618
[2026-03-14 18:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 22:35:05]  *** The last 200 lines of the pilot log: ***
[2026-03-14 22:35:05] 2026-03-14 21:34:21,673 | INFO     | log transfer has been attempted: DONE
[2026-03-14 22:35:05] 2026-03-14 21:34:21,673 | INFO     | job 7045950618 has finished - writing final server update
[2026-03-14 22:35:05] 2026-03-14 21:34:21,673 | INFO     | total number of processed events: 400 (read)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,675 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-7045950618/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,676 | INFO     | extracted standard info from prmon json
[2026-03-14 22:35:05] 2026-03-14 21:34:21,676 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 22:35:05] 2026-03-14 21:34:21,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 22:35:05] 2026-03-14 21:34:21,677 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 22:35:05] 2026-03-14 21:34:21,677 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 22:35:05] 2026-03-14 21:34:21,682 | INFO     | fitting pss+swap vs Time
[2026-03-14 22:35:05] 2026-03-14 21:34:21,682 | INFO     | sum of square deviations: 3212467674.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,684 | INFO     | sum of deviations: 63957403128.500015
[2026-03-14 22:35:05] 2026-03-14 21:34:21,684 | INFO     | mean x: 1773517392.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,685 | INFO     | mean y: 2439420.0504587158
[2026-03-14 22:35:05] 2026-03-14 21:34:21,685 | INFO     | intersect: -35306730452.04274
[2026-03-14 22:35:05] 2026-03-14 21:34:21,685 | INFO     | chi2: 5.3136352919384136
[2026-03-14 22:35:05] 2026-03-14 21:34:21,686 | INFO     | sum of square deviations: 2996454322.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,691 | INFO     | sum of deviations: 76696433623.99997
[2026-03-14 22:35:05] 2026-03-14 21:34:21,691 | INFO     | mean x: 1773517240.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,691 | INFO     | mean y: 2448224.079812207
[2026-03-14 22:35:05] 2026-03-14 21:34:21,691 | INFO     | intersect: -45392018923.3088
[2026-03-14 22:35:05] 2026-03-14 21:34:21,692 | INFO     | chi2: 4.5842939357227825
[2026-03-14 22:35:05] 2026-03-14 21:34:21,692 | INFO     | current chi2=4.5842939357227825 (change=13.725845229200278 %)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,692 | INFO     | right removable region: 212
[2026-03-14 22:35:05] 2026-03-14 21:34:21,693 | INFO     | sum of square deviations: 2996454322.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,694 | INFO     | sum of deviations: -5801581656.000001
[2026-03-14 22:35:05] 2026-03-14 21:34:21,695 | INFO     | mean x: 1773517545.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,695 | INFO     | mean y: 2488576.436619718
[2026-03-14 22:35:05] 2026-03-14 21:34:21,695 | INFO     | intersect: 3436282570.9329443
[2026-03-14 22:35:05] 2026-03-14 21:34:21,695 | INFO     | chi2: 1.2439996944470868
[2026-03-14 22:35:05] 2026-03-14 21:34:21,695 | INFO     | current chi2=1.2439996944470868 (change=76.58853823982948 %)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,696 | INFO     | sum of square deviations: 2790348132.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,698 | INFO     | sum of deviations: -21349812577.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,698 | INFO     | mean x: 1773517697.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,698 | INFO     | mean y: 2499951.206730769
[2026-03-14 22:35:05] 2026-03-14 21:34:21,698 | INFO     | intersect: 13572229839.127518
[2026-03-14 22:35:05] 2026-03-14 21:34:21,699 | INFO     | chi2: 0.8815823809733272
[2026-03-14 22:35:05] 2026-03-14 21:34:21,699 | INFO     | current chi2=0.8815823809733272 (change=29.133231711511076 %)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,699 | INFO     | sum of square deviations: 2593916542.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,701 | INFO     | sum of deviations: -16600331806.999996
[2026-03-14 22:35:05] 2026-03-14 21:34:21,701 | INFO     | mean x: 1773517850.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,701 | INFO     | mean y: 2496232.9950738917
[2026-03-14 22:35:05] 2026-03-14 21:34:21,702 | INFO     | intersect: 11352508578.78058
[2026-03-14 22:35:05] 2026-03-14 21:34:21,702 | INFO     | chi2: 0.8592996637754846
[2026-03-14 22:35:05] 2026-03-14 21:34:21,702 | INFO     | current chi2=0.8592996637754846 (change=2.5275819570305997 %)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,702 | INFO     | left removable region: 30
[2026-03-14 22:35:05] 2026-03-14 21:34:21,703 | INFO     | sum of square deviations: 1869302025.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,704 | INFO     | sum of deviations: 5450021576.0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,704 | INFO     | mean x: 1773518124.5
[2026-03-14 22:35:05] 2026-03-14 21:34:21,705 | INFO     | mean y: 2499858.021978022
[2026-03-14 22:35:05] 2026-03-14 21:34:21,705 | INFO     | intersect: -5168260089.861069
[2026-03-14 22:35:05] 2026-03-14 21:34:21,705 | INFO     | chi2: 0.0008692061651457689
[2026-03-14 22:35:05] 2026-03-14 21:34:21,705 | INFO     | current memory leak: 2.92 B/s (using 182 data points, chi2=0.00)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,706 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,706 | INFO     | ..............................
[2026-03-14 22:35:05] 2026-03-14 21:34:21,706 | INFO     | . Timing measurements:
[2026-03-14 22:35:05] 2026-03-14 21:34:21,706 | INFO     | . get job = 0 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,706 | INFO     | . initial setup = 103 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,707 | INFO     | . payload setup = 135 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,707 | INFO     | . stage-in = 0 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,707 | INFO     | . payload execution = 13392 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,707 | INFO     | . stage-out = 3 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,710 | INFO     | . log creation = 1 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,710 | INFO     | ..............................
[2026-03-14 22:35:05] 2026-03-14 21:34:21,885 | INFO     | 
[2026-03-14 22:35:05] 2026-03-14 21:34:21,885 | INFO     | job summary report
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | --------------------------------------------------
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | PanDA job id: 7045950618
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | task id: 48955010
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | errors: (none)
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | pilot state: finished 
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | transexitcode: 0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,886 | INFO     | exeerrorcode: 0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | exeerrordiag: 
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | exitcode: 0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | exitmsg: OK
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | cpuconsumptiontime: 51514 s
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | nevents: 400
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | neventsw: 0
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | pid: 20821
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | pgrp: 20821
[2026-03-14 22:35:05] 2026-03-14 21:34:21,887 | INFO     | corecount: 8
[2026-03-14 22:35:05] 2026-03-14 21:34:21,888 | INFO     | event service: False
[2026-03-14 22:35:05] 2026-03-14 21:34:21,888 | INFO     | sizes: {0: 2279089, 1: 2279775, 2: 2280236, 12: 2280236, 13532: 2310491, 13533: 2310490, 13536: 2319674, 13537: 2319730, 13538: 2319924}
[2026-03-14 22:35:05] 2026-03-14 21:34:21,888 | INFO     | --------------------------------------------------
[2026-03-14 22:35:05] 2026-03-14 21:34:21,888 | INFO     | 
[2026-03-14 22:35:05] 2026-03-14 21:34:21,888 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | job 7045950618 has completed (purged errors)
[2026-03-14 22:35:05] 2026-03-14 21:34:22,243 | INFO     | overall cleanup function is called
[2026-03-14 22:35:05] 2026-03-14 21:34:23,256 | INFO     | --- collectZombieJob: --- 10, [20821]
[2026-03-14 22:35:05] 2026-03-14 21:34:23,256 | INFO     | zombie collector waiting for pid 20821
[2026-03-14 22:35:05] 2026-03-14 21:34:23,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 22:35:05] 2026-03-14 21:34:23,257 | INFO     | collected zombie processes
[2026-03-14 22:35:05] 2026-03-14 21:34:23,257 | INFO     | will attempt to kill all subprocesses of pid=20821
[2026-03-14 22:35:05] 2026-03-14 21:34:23,392 | INFO     | process IDs to be killed: [20821] (in reverse order)
[2026-03-14 22:35:05] 2026-03-14 21:34:24,419 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 22:35:05] 2026-03-14 21:34:24,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 22:35:05] 2026-03-14 21:34:24,434 | INFO     | did not find any defunct processes belonging to 20821
[2026-03-14 22:35:05] 2026-03-14 21:34:24,437 | INFO     | did not find any defunct processes belonging to 20821
[2026-03-14 22:35:05] 2026-03-14 21:34:24,438 | INFO     | ready for new job
[2026-03-14 22:35:05] 2026-03-14 21:34:24,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 22:35:05] 2026-03-14 21:34:24,446 | INFO     | **************************************
[2026-03-14 22:35:05] 2026-03-14 21:34:24,446 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 22:35:05] 2026-03-14 21:34:24,446 | INFO     | **************************************
[2026-03-14 22:35:05] 2026-03-14 21:34:24,446 | INFO     | 
[2026-03-14 22:35:05] 2026-03-14 21:34:24,447 | INFO     | pilot is running in a VM
[2026-03-14 22:35:05] 2026-03-14 21:34:24,447 | INFO     | architecture information:
[2026-03-14 22:35:05] 2026-03-14 21:34:24,455 | INFO     | executing command: cat /etc/os-release
[2026-03-14 22:35:05] 2026-03-14 21:34:24,784 | INFO     | cat /etc/os-release:
[2026-03-14 22:35:05] NAME="CentOS Linux"
[2026-03-14 22:35:05] VERSION="7 (Core)"
[2026-03-14 22:35:05] ID="centos"
[2026-03-14 22:35:05] ID_LIKE="rhel fedora"
[2026-03-14 22:35:05] VERSION_ID="7"
[2026-03-14 22:35:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 22:35:05] ANSI_COLOR="0;31"
[2026-03-14 22:35:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 22:35:05] HOME_URL="https://www.centos.org/"
[2026-03-14 22:35:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 22:35:05] 
[2026-03-14 22:35:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 22:35:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 22:35:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 22:35:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 22:35:05] 
[2026-03-14 22:35:05] 2026-03-14 21:34:24,784 | INFO     | **************************************
[2026-03-14 22:35:05] 2026-03-14 21:34:25,287 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2026-03-14 22:35:05] 2026-03-14 21:34:25,485 | INFO     | sufficient remaining disk space (494679359488 B)
[2026-03-14 22:35:05] 2026-03-14 21:34:25,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 22:35:05] 2026-03-14 21:34:25,486 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 22:35:05] 2026-03-14 21:34:25,486 | INFO     | update_server=False
[2026-03-14 22:35:05] 2026-03-14 21:34:25,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 22:35:05] 2026-03-14 21:34:25,692 | INFO     | all payload control threads have been joined
[2026-03-14 22:35:05] 2026-03-14 21:34:25,818 | INFO     | all data control threads have been joined
[2026-03-14 22:35:05] 2026-03-14 21:34:26,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:35:05] 2026-03-14 21:34:26,011 | INFO     | aborting loop
[2026-03-14 22:35:05] 2026-03-14 21:34:26,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 22:35:05] 2026-03-14 21:34:26,316 | INFO     | all job control threads have been joined
[2026-03-14 22:35:05] 2026-03-14 21:34:26,491 | INFO     | [job] retrieve thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,625 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,698 | INFO     | [payload] control thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 22:35:05] 2026-03-14 21:34:26,824 | INFO     | [data] control thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,884 | INFO     | [job] validate thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,907 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:26,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 22:35:05] 2026-03-14 21:34:26,991 | INFO     | [data] copytool_in thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,017 | INFO     | [job] job monitor thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,055 | INFO     | [payload] failed_post thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,279 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,322 | INFO     | [job] control thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,456 | INFO     | [payload] validate_post thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:27,918 | INFO     | [job] queue monitor thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:28,130 | INFO     | [data] copytool_out thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:30,794 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 22:35:05] 2026-03-14 21:34:54,412 | INFO     | PID=16342 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 22:35:05] 2026-03-14 21:34:54,413 | INFO     | .. there are 9 such processes running
[2026-03-14 22:35:05] 2026-03-14 21:34:54,413 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 22:35:05] 2026-03-14 21:34:54,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 22:35:05] 2026-03-14 21:34:54,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 22:35:05] 2026-03-14 21:34:55,007 | INFO     | [monitor] cgroup control has ended
[2026-03-14 22:35:05] 2026-03-14 21:34:55,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141457073984)>', '<ExcThread(monitor, started 140140848588544)>']
[2026-03-14 22:35:05] 2026-03-14 21:34:56,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 22:35:05] 2026-03-14 21:34:56,425 | INFO     | [monitor] control thread has ended
[2026-03-14 22:35:05] 2026-03-14 21:35:00,765 | INFO     | all workflow threads have been joined
[2026-03-14 22:35:05] 2026-03-14 21:35:00,765 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 22:35:05] 2026-03-14 21:35:00,766 | INFO     | traces error code: 0
[2026-03-14 22:35:05] 2026-03-14 21:35:00,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 22:35:05] 2026-03-14 21:35:01,195 [wrapper] ==== pilot stdout END ====
[2026-03-14 22:35:05] 2026-03-14 21:35:01,232 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 22:35:05] 2026-03-14 21:35:01,296 [wrapper] pilotpid: 16342
[2026-03-14 22:35:05] 2026-03-14 21:35:01,329 [wrapper] Pilot exit status: 0
[2026-03-14 22:35:05] 2026-03-14 21:35:01,702 [wrapper] pandaids: 7045950618
[2026-03-14 22:35:05] 2026-03-14 21:35:02,456 [wrapper] cleanup supervisor_pilot 28773 16343
[2026-03-14 22:35:05] 2026-03-14 21:35:02,507 [wrapper] Test setup, not cleaning
[2026-03-14 22:35:05] 2026-03-14 21:35:02,558 [wrapper] apfmon messages muted
[2026-03-14 22:35:05] 2026-03-14 21:35:02,599 [wrapper] ==== wrapper stdout END ====
[2026-03-14 22:35:05] 2026-03-14 21:35:02,644 [wrapper] ==== wrapper stderr END ====
[2026-03-14 22:35:05]  *** Error codes and diagnostics ***
[2026-03-14 22:35:05]     "exeErrorCode": 0,
[2026-03-14 22:35:05]     "exeErrorDiag": "",
[2026-03-14 22:35:05]     "pilotErrorCode": 0,
[2026-03-14 22:35:05]     "pilotErrorDiag": "",
[2026-03-14 22:35:05]  *** Listing of results directory ***
[2026-03-14 22:35:05] total 615492
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc    585013 Mar 14 05:19 pilot3.tar.gz
[2026-03-14 22:35:05] -rwx------. 1 boinc boinc     36322 Mar 14 05:20 runpilot2-wrapper.sh
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc      5111 Mar 14 05:21 queuedata.json
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc       100 Mar 14 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 22:35:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 18:42 run_atlas
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc       105 Mar 14 18:42 job.xml
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc      6392 Mar 14 18:42 init_data.xml
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc 440066329 Mar 14 18:42 EVNT.46701403._001791.pool.root.1
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:42 start_atlas.sh
[2026-03-14 22:35:05] drwxrwx--x. 2 boinc boinc        68 Mar 14 18:42 shared
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc    597526 Mar 14 18:42 input.tar.gz
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc         0 Mar 14 18:42 boinc_lockfile
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc      2563 Mar 14 18:43 pandaJob.out
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc       415 Mar 14 18:48 workernode_map.json
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc   1005897 Mar 14 18:48 agis_schedconf.cvmfs.json
[2026-03-14 22:35:05] drwx------. 5 boinc boinc      4096 Mar 14 18:48 pilot3
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc 181563047 Mar 14 22:32 HITS.48955010._038506.pool.root.1
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc       531 Mar 14 22:33 boinc_task_state.xml
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc        95 Mar 14 22:33 pilot_heartbeat.json
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc      1013 Mar 14 22:34 memory_monitor_summary.json
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc   1511579 Mar 14 22:34 agis_ddmendpoints.agis.ALL.json
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc    461809 Mar 14 22:34 log.48955010._038506.job.log.tgz.1
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc      6319 Mar 14 22:34 heartbeat.json
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc      8192 Mar 14 22:34 boinc_mmap_file
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc        28 Mar 14 22:34 wrapper_checkpoint.txt
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc      4881 Mar 14 22:35 pilotlog.txt
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc   1895788 Mar 14 22:35 log.48955010._038506.job.log.1
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc       357 Mar 14 22:35 output.list
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc       620 Mar 14 22:35 runtime_log
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc   2375680 Mar 14 22:35 result.tar.gz
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc       655 Mar 14 22:35 ULcKDmffVL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzKpLDmQO0BQm.diag
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc      8832 Mar 14 22:35 runtime_log.err
[2026-03-14 22:35:05] -rw-r--r--. 1 boinc boinc     20733 Mar 14 22:35 stderr.txt
[2026-03-14 22:35:05] HITS file was successfully produced:
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc 181563047 Mar 14 22:32 shared/HITS.pool.root.1
[2026-03-14 22:35:05]  *** Contents of shared directory: ***
[2026-03-14 22:35:05] total 609984
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc 440066329 Mar 14 18:42 ATLAS.root_0
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc     15845 Mar 14 18:42 start_atlas.sh
[2026-03-14 22:35:05] -rw-r--r--. 2 boinc boinc    597526 Mar 14 18:42 input.tar.gz
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc 181563047 Mar 14 22:32 HITS.pool.root.1
[2026-03-14 22:35:05] -rw-------. 1 boinc boinc   2375680 Mar 14 22:35 result.tar.gz
22:35:06 (12231): run_atlas exited; CPU time 51721.132331
22:35:06 (12231): called boinc_finish(0)

</stderr_txt>
]]>

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