Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:57:09 (17155): wrapper (7.7.26015): starting
14:57:09 (17155): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 14:57:09] Arguments: --nthreads 8
[2026-03-14 14:57:09] Threads: 8
[2026-03-14 14:57:09] Checking for CVMFS
[2026-03-14 14:57:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 14:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 14:57:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 14:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 14:57:13] 2.11.2.0 1035 127665 136808 157279 2 54 15888885 25165825 4635 130560 160 37686401 99.810 28256754 1001 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 14:57:13] CVMFS is ok
[2026-03-14 14:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 14:57:13] Checking for apptainer binary...
[2026-03-14 14:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 14:57:13] Running /usr/bin/apptainer --version
[2026-03-14 14:57:13] apptainer version 1.3.2-1.el7
[2026-03-14 14:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 14:57:30] cg-vwn358.simple-grid.lan
[2026-03-14 14:57:30] apptainer works
[2026-03-14 14:57:30] Set ATHENA_PROC_NUMBER=8
[2026-03-14 14:57:30] Set ATHENA_CORE_NUMBER=8
[2026-03-14 14:57:30] Starting ATLAS job with PandaID=7045292552
[2026-03-14 14:57:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:59:39]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:59:39] 2026-03-14 17:58:52,653 | INFO     | log transfer has been attempted: DONE
[2026-03-14 18:59:39] 2026-03-14 17:58:52,653 | INFO     | job 7045292552 has finished - writing final server update
[2026-03-14 18:59:39] 2026-03-14 17:58:52,654 | INFO     | total number of processed events: 400 (read)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,656 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7045292552/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,656 | INFO     | extracted standard info from prmon json
[2026-03-14 18:59:39] 2026-03-14 17:58:52,657 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 18:59:39] 2026-03-14 17:58:52,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 18:59:39] 2026-03-14 17:58:52,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 18:59:39] 2026-03-14 17:58:52,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 18:59:39] 2026-03-14 17:58:52,662 | INFO     | fitting pss+swap vs Time
[2026-03-14 18:59:39] 2026-03-14 17:58:52,662 | INFO     | sum of square deviations: 3675146117.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,664 | INFO     | sum of deviations: 74530322647.99998
[2026-03-14 18:59:39] 2026-03-14 17:58:52,665 | INFO     | mean x: 1773504169.5
[2026-03-14 18:59:39] 2026-03-14 17:58:52,665 | INFO     | mean y: 2433397.8157894737
[2026-03-14 18:59:39] 2026-03-14 17:58:52,665 | INFO     | intersect: -35963439457.95678
[2026-03-14 18:59:39] 2026-03-14 17:58:52,665 | INFO     | chi2: 5.663977799753134
[2026-03-14 18:59:39] 2026-03-14 17:58:52,666 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,668 | INFO     | sum of deviations: 87793465113.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,668 | INFO     | mean x: 1773504017.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,668 | INFO     | mean y: 2441777.116591928
[2026-03-14 18:59:39] 2026-03-14 17:58:52,668 | INFO     | intersect: -45277940758.146736
[2026-03-14 18:59:39] 2026-03-14 17:58:52,669 | INFO     | chi2: 4.935387670696036
[2026-03-14 18:59:39] 2026-03-14 17:58:52,669 | INFO     | current chi2=4.935387670696036 (change=12.863576709090452 %)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,669 | INFO     | right removable region: 222
[2026-03-14 18:59:39] 2026-03-14 17:58:52,669 | INFO     | sum of square deviations: 3438620752.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,671 | INFO     | sum of deviations: -1021953252.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,672 | INFO     | mean x: 1773504322.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,672 | INFO     | mean y: 2482032.461883408
[2026-03-14 18:59:39] 2026-03-14 17:58:52,672 | INFO     | intersect: 529565023.0038876
[2026-03-14 18:59:39] 2026-03-14 17:58:52,672 | INFO     | chi2: 1.2813587910020101
[2026-03-14 18:59:39] 2026-03-14 17:58:52,672 | INFO     | current chi2=1.2813587910020101 (change=77.37705131792964 %)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,673 | INFO     | sum of square deviations: 3212467674.5
[2026-03-14 18:59:39] 2026-03-14 17:58:52,674 | INFO     | sum of deviations: -21842027006.5
[2026-03-14 18:59:39] 2026-03-14 17:58:52,675 | INFO     | mean x: 1773504474.5
[2026-03-14 18:59:39] 2026-03-14 17:58:52,675 | INFO     | mean y: 2495977.600917431
[2026-03-14 18:59:39] 2026-03-14 17:58:52,675 | INFO     | intersect: 12060806458.252445
[2026-03-14 18:59:39] 2026-03-14 17:58:52,675 | INFO     | chi2: 0.8215736307108207
[2026-03-14 18:59:39] 2026-03-14 17:58:52,675 | INFO     | current chi2=0.8215736307108207 (change=35.88262425168535 %)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,676 | INFO     | sum of square deviations: 2996454322.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,677 | INFO     | sum of deviations: -24064621512.000004
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | mean x: 1773504627.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | mean y: 2497518.460093897
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | intersect: 14245570501.481438
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | chi2: 0.8032894627434635
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | current chi2=0.8032894627434635 (change=2.2255056983191945 %)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,678 | INFO     | left removable region: 30
[2026-03-14 18:59:39] 2026-03-14 17:58:52,679 | INFO     | sum of square deviations: 2194675568.0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,680 | INFO     | sum of deviations: -7166861421.499999
[2026-03-14 18:59:39] 2026-03-14 17:58:52,680 | INFO     | mean x: 1773504901.5
[2026-03-14 18:59:39] 2026-03-14 17:58:52,681 | INFO     | mean y: 2506102.7447916665
[2026-03-14 18:59:39] 2026-03-14 17:58:52,681 | INFO     | intersect: 5794006242.778933
[2026-03-14 18:59:39] 2026-03-14 17:58:52,681 | INFO     | chi2: 0.01293132670276222
[2026-03-14 18:59:39] 2026-03-14 17:58:52,681 | INFO     | current memory leak: -3.27 B/s (using 192 data points, chi2=0.01)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,682 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,682 | INFO     | ..............................
[2026-03-14 18:59:39] 2026-03-14 17:58:52,682 | INFO     | . Timing measurements:
[2026-03-14 18:59:39] 2026-03-14 17:58:52,682 | INFO     | . get job = 0 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,682 | INFO     | . initial setup = 104 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | . payload setup = 126 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | . stage-in = 0 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | . payload execution = 13994 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | . stage-out = 4 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | . log creation = 1 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,683 | INFO     | ..............................
[2026-03-14 18:59:39] 2026-03-14 17:58:52,796 | INFO     | 
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | job summary report
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | --------------------------------------------------
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | PanDA job id: 7045292552
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | task id: 48955010
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | errors: (none)
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 18:59:39] 2026-03-14 17:58:52,797 | INFO     | pilot state: finished 
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | transexitcode: 0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | exeerrorcode: 0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | exeerrordiag: 
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | exitcode: 0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | exitmsg: OK
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | cpuconsumptiontime: 53842 s
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | nevents: 400
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | neventsw: 0
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | pid: 25823
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | pgrp: 25823
[2026-03-14 18:59:39] 2026-03-14 17:58:52,798 | INFO     | corecount: 8
[2026-03-14 18:59:39] 2026-03-14 17:58:52,799 | INFO     | event service: False
[2026-03-14 18:59:39] 2026-03-14 17:58:52,799 | INFO     | sizes: {0: 2279690, 1: 2280147, 2: 2280207, 12: 2280235, 14125: 2310717, 14126: 2310716, 14132: 2319898, 14134: 2319954, 14135: 2320148}
[2026-03-14 18:59:39] 2026-03-14 17:58:52,799 | INFO     | --------------------------------------------------
[2026-03-14 18:59:39] 2026-03-14 17:58:52,799 | INFO     | 
[2026-03-14 18:59:39] 2026-03-14 17:58:52,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-14 18:59:39] 2026-03-14 17:58:53,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 18:59:39] 2026-03-14 17:58:53,242 | INFO     | job 7045292552 has completed (purged errors)
[2026-03-14 18:59:39] 2026-03-14 17:58:53,243 | INFO     | overall cleanup function is called
[2026-03-14 18:59:39] 2026-03-14 17:58:54,251 | INFO     | --- collectZombieJob: --- 10, [25823]
[2026-03-14 18:59:39] 2026-03-14 17:58:54,252 | INFO     | zombie collector waiting for pid 25823
[2026-03-14 18:59:39] 2026-03-14 17:58:54,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 18:59:39] 2026-03-14 17:58:54,252 | INFO     | collected zombie processes
[2026-03-14 18:59:39] 2026-03-14 17:58:54,252 | INFO     | will attempt to kill all subprocesses of pid=25823
[2026-03-14 18:59:39] 2026-03-14 17:58:54,392 | INFO     | process IDs to be killed: [25823] (in reverse order)
[2026-03-14 18:59:39] 2026-03-14 17:58:55,164 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 18:59:39] 2026-03-14 17:58:55,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 18:59:39] 2026-03-14 17:58:55,167 | INFO     | did not find any defunct processes belonging to 25823
[2026-03-14 18:59:39] 2026-03-14 17:58:55,170 | INFO     | did not find any defunct processes belonging to 25823
[2026-03-14 18:59:39] 2026-03-14 17:58:55,170 | INFO     | ready for new job
[2026-03-14 18:59:39] 2026-03-14 17:58:55,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 18:59:39] 2026-03-14 17:58:55,173 | INFO     | **************************************
[2026-03-14 18:59:39] 2026-03-14 17:58:55,173 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 18:59:39] 2026-03-14 17:58:55,173 | INFO     | **************************************
[2026-03-14 18:59:39] 2026-03-14 17:58:55,173 | INFO     | 
[2026-03-14 18:59:39] 2026-03-14 17:58:55,174 | INFO     | pilot is running in a VM
[2026-03-14 18:59:39] 2026-03-14 17:58:55,174 | INFO     | architecture information:
[2026-03-14 18:59:39] 2026-03-14 17:58:55,179 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:59:39] 2026-03-14 17:58:55,411 | INFO     | cat /etc/os-release:
[2026-03-14 18:59:39] NAME="CentOS Linux"
[2026-03-14 18:59:39] VERSION="7 (Core)"
[2026-03-14 18:59:39] ID="centos"
[2026-03-14 18:59:39] ID_LIKE="rhel fedora"
[2026-03-14 18:59:39] VERSION_ID="7"
[2026-03-14 18:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:59:39] ANSI_COLOR="0;31"
[2026-03-14 18:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:59:39] HOME_URL="https://www.centos.org/"
[2026-03-14 18:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:59:39] 
[2026-03-14 18:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:59:39] 
[2026-03-14 18:59:39] 2026-03-14 17:58:55,412 | INFO     | **************************************
[2026-03-14 18:59:39] 2026-03-14 17:58:55,916 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-14 18:59:39] 2026-03-14 17:58:56,138 | INFO     | sufficient remaining disk space (495826501632 B)
[2026-03-14 18:59:39] 2026-03-14 17:58:56,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:59:39] 2026-03-14 17:58:56,139 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:59:39] 2026-03-14 17:58:56,139 | INFO     | update_server=False
[2026-03-14 18:59:39] 2026-03-14 17:58:56,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:59:39] 2026-03-14 17:58:56,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:59:39] 2026-03-14 17:58:56,142 | INFO     | aborting loop
[2026-03-14 18:59:39] 2026-03-14 17:58:56,315 | INFO     | all data control threads have been joined
[2026-03-14 18:59:39] 2026-03-14 17:58:56,335 | INFO     | all job control threads have been joined
[2026-03-14 18:59:39] 2026-03-14 17:58:57,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:59:39] 2026-03-14 17:58:57,145 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,148 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,322 | INFO     | [data] control thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,342 | INFO     | [job] control thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,371 | INFO     | all payload control threads have been joined
[2026-03-14 18:59:39] 2026-03-14 17:58:57,464 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,472 | INFO     | [job] validate thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,511 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,605 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:59:39] 2026-03-14 17:58:57,617 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:57,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:59:39] 2026-03-14 17:58:58,016 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:58,313 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:58,377 | INFO     | [payload] control thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:58,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:58,816 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:58:59,620 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:59:01,081 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:59:39] 2026-03-14 17:59:25,167 | INFO     | PID=21362 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 18:59:39] 2026-03-14 17:59:25,167 | INFO     | .. there are 9 such processes running
[2026-03-14 18:59:39] 2026-03-14 17:59:25,168 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:59:39] 2026-03-14 17:59:25,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:59:39] 2026-03-14 17:59:25,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:59:39] 2026-03-14 17:59:28,748 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:59:39] 2026-03-14 17:59:29,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215790749504)>', '<ExcThread(monitor, started 140215347820288)>']
[2026-03-14 18:59:39] 2026-03-14 17:59:30,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:59:39] 2026-03-14 17:59:30,197 | INFO     | [monitor] control thread has ended
[2026-03-14 18:59:39] 2026-03-14 17:59:34,432 | INFO     | all workflow threads have been joined
[2026-03-14 18:59:39] 2026-03-14 17:59:34,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:59:39] 2026-03-14 17:59:34,433 | INFO     | traces error code: 0
[2026-03-14 18:59:39] 2026-03-14 17:59:34,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:59:39] 2026-03-14 17:59:34,913 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:59:39] 2026-03-14 17:59:35,010 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:59:39] 2026-03-14 17:59:35,105 [wrapper] pilotpid: 21362
[2026-03-14 18:59:39] 2026-03-14 17:59:35,177 [wrapper] Pilot exit status: 0
[2026-03-14 18:59:39] 2026-03-14 17:59:35,653 [wrapper] pandaids: 7045292552
[2026-03-14 18:59:39] 2026-03-14 17:59:36,485 [wrapper] cleanup supervisor_pilot   822 21363
[2026-03-14 18:59:39] 2026-03-14 17:59:36,538 [wrapper] Test setup, not cleaning
[2026-03-14 18:59:39] 2026-03-14 17:59:36,683 [wrapper] apfmon messages muted
[2026-03-14 18:59:39] 2026-03-14 17:59:36,802 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:59:39] 2026-03-14 17:59:36,917 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:59:39]  *** Error codes and diagnostics ***
[2026-03-14 18:59:39]     "exeErrorCode": 0,
[2026-03-14 18:59:39]     "exeErrorDiag": "",
[2026-03-14 18:59:39]     "pilotErrorCode": 0,
[2026-03-14 18:59:39]     "pilotErrorDiag": "",
[2026-03-14 18:59:39]  *** Listing of results directory ***
[2026-03-14 18:59:39] total 620680
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 00:38 pilot3.tar.gz
[2026-03-14 18:59:39] -rwx------. 1 boinc boinc     36322 Mar 14 00:41 runpilot2-wrapper.sh
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 00:44 queuedata.json
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc       100 Mar 14 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:59:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 14:57 run_atlas
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc       105 Mar 14 14:57 job.xml
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc      6391 Mar 14 14:57 init_data.xml
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc 439314667 Mar 14 14:57 EVNT.46701403._001715.pool.root.1
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 14:57 start_atlas.sh
[2026-03-14 18:59:39] drwxrwx--x. 2 boinc boinc        68 Mar 14 14:57 shared
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc    597529 Mar 14 14:57 input.tar.gz
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc         0 Mar 14 14:57 boinc_lockfile
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc      2563 Mar 14 14:57 pandaJob.out
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc       415 Mar 14 15:03 workernode_map.json
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc   1004579 Mar 14 15:03 agis_schedconf.cvmfs.json
[2026-03-14 18:59:39] drwx------. 5 boinc boinc      4096 Mar 14 15:03 pilot3
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc 187483215 Mar 14 18:57 HITS.48955010._035996.pool.root.1
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc       531 Mar 14 18:57 boinc_task_state.xml
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc      1013 Mar 14 18:58 memory_monitor_summary.json
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc   1511579 Mar 14 18:58 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc    454396 Mar 14 18:58 log.48955010._035996.job.log.tgz.1
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc      6325 Mar 14 18:58 heartbeat.json
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc        95 Mar 14 18:59 pilot_heartbeat.json
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc      4880 Mar 14 18:59 pilotlog.txt
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc        28 Mar 14 18:59 wrapper_checkpoint.txt
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc   1973573 Mar 14 18:59 log.48955010._035996.job.log.1
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc       357 Mar 14 18:59 output.list
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc       620 Mar 14 18:59 runtime_log
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc   2447360 Mar 14 18:59 result.tar.gz
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc      8816 Mar 14 18:59 runtime_log.err
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc       655 Mar 14 18:59 nNnKDmOJRL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRLrLDm7zDhcm.diag
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc      8192 Mar 14 18:59 boinc_mmap_file
[2026-03-14 18:59:39] -rw-r--r--. 1 boinc boinc     20721 Mar 14 18:59 stderr.txt
[2026-03-14 18:59:39] HITS file was successfully produced:
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc 187483215 Mar 14 18:57 shared/HITS.pool.root.1
[2026-03-14 18:59:39]  *** Contents of shared directory: ***
[2026-03-14 18:59:39] total 615104
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc 439314667 Mar 14 14:57 ATLAS.root_0
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar 14 14:57 start_atlas.sh
[2026-03-14 18:59:39] -rw-r--r--. 2 boinc boinc    597529 Mar 14 14:57 input.tar.gz
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc 187483215 Mar 14 18:57 HITS.pool.root.1
[2026-03-14 18:59:39] -rw-------. 1 boinc boinc   2447360 Mar 14 18:59 result.tar.gz
18:59:41 (17155): run_atlas exited; CPU time 54061.690512
18:59:41 (17155): called boinc_finish(0)

</stderr_txt>
]]>

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