Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:35 (3393430): wrapper (7.7.26015): starting
00:01:35 (3393430): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 00:01:35] Arguments: --nthreads 12
[2026-03-14 00:01:35] Threads: 12
[2026-03-14 00:01:35] Checking for CVMFS
[2026-03-14 00:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:01:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:01:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:01:40] 2.13.3.0 10781 111561 234612 157263 3 536 32661307 39288832 17156 16776704 0 105822916 99.501 143438217 34358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 00:01:40] CVMFS is ok
[2026-03-14 00:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:01:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:01:40] Further information can be found at the LHC@home message board.
[2026-03-14 00:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:01:40] Checking for apptainer binary...
[2026-03-14 00:01:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:01:40] Running /usr/bin/apptainer --version
[2026-03-14 00:01:40] apptainer version 1.4.5-2.el9
[2026-03-14 00:01:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:01:41] c-211-2.aglt2.org
[2026-03-14 00:01:41] apptainer works
[2026-03-14 00:01:41] Set ATHENA_PROC_NUMBER=12
[2026-03-14 00:01:41] Set ATHENA_CORE_NUMBER=12
[2026-03-14 00:01:41] Starting ATLAS job with PandaID=7054059495
[2026-03-14 00:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:05:43]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:05:43] 2026-03-14 17:05:01,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:05:43] 2026-03-14 17:05:01,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:05:43] 2026-03-14 17:05:01,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:05:43] 2026-03-14 17:05:01,413 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:05:43] 2026-03-14 17:05:01,415 | INFO     | sum of square deviations: 139355788481.3421
[2026-03-14 13:05:43] 2026-03-14 17:05:01,429 | INFO     | sum of deviations: 1563551638900.991
[2026-03-14 13:05:43] 2026-03-14 17:05:01,429 | INFO     | mean x: 1773484509.5143604
[2026-03-14 13:05:43] 2026-03-14 17:05:01,429 | INFO     | mean y: 2591635.137075718
[2026-03-14 13:05:43] 2026-03-14 17:05:01,429 | INFO     | intersect: -19895646117.56279
[2026-03-14 13:05:43] 2026-03-14 17:05:01,430 | INFO     | chi2: 10.515915250341944
[2026-03-14 13:05:43] 2026-03-14 17:05:01,432 | INFO     | sum of square deviations: 136644840829.47429
[2026-03-14 13:05:43] 2026-03-14 17:05:01,447 | INFO     | sum of deviations: 1548981570246.0515
[2026-03-14 13:05:43] 2026-03-14 17:05:01,447 | INFO     | mean x: 1773484357.026281
[2026-03-14 13:05:43] 2026-03-14 17:05:01,447 | INFO     | mean y: 2590815.947437582
[2026-03-14 13:05:43] 2026-03-14 17:05:01,447 | INFO     | intersect: -20101311881.569042
[2026-03-14 13:05:43] 2026-03-14 17:05:01,448 | INFO     | chi2: 10.511309052135095
[2026-03-14 13:05:43] 2026-03-14 17:05:01,449 | INFO     | current chi2=10.511309052135095 (change=0.04380216174430718 %)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,449 | INFO     | right removable region: 760
[2026-03-14 13:05:43] 2026-03-14 17:05:01,450 | INFO     | sum of square deviations: 136643946078.42033
[2026-03-14 13:05:43] 2026-03-14 17:05:01,467 | INFO     | sum of deviations: 1304155220343.5215
[2026-03-14 13:05:43] 2026-03-14 17:05:01,468 | INFO     | mean x: 1773484662.0275953
[2026-03-14 13:05:43] 2026-03-14 17:05:01,468 | INFO     | mean y: 2606218.356110381
[2026-03-14 13:05:43] 2026-03-14 17:05:01,468 | INFO     | intersect: -16923861046.099756
[2026-03-14 13:05:43] 2026-03-14 17:05:01,469 | INFO     | chi2: 6.660973550087594
[2026-03-14 13:05:43] 2026-03-14 17:05:01,469 | INFO     | current chi2=6.660973550087594 (change=36.6581662982592 %)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,470 | INFO     | sum of square deviations: 133967777494.17313
[2026-03-14 13:05:43] 2026-03-14 17:05:01,498 | INFO     | sum of deviations: 1097401939375.5415
[2026-03-14 13:05:43] 2026-03-14 17:05:01,498 | INFO     | mean x: 1773484814.533069
[2026-03-14 13:05:43] 2026-03-14 17:05:01,498 | INFO     | mean y: 2617999.0383597882
[2026-03-14 13:05:43] 2026-03-14 17:05:01,498 | INFO     | intersect: -14524947594.16044
[2026-03-14 13:05:43] 2026-03-14 17:05:01,499 | INFO     | chi2: 4.367999062826669
[2026-03-14 13:05:43] 2026-03-14 17:05:01,499 | INFO     | current chi2=4.367999062826669 (change=34.42401429789151 %)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,500 | INFO     | sum of square deviations: 131326772481.87976
[2026-03-14 13:05:43] 2026-03-14 17:05:01,534 | INFO     | sum of deviations: 934833618358.4222
[2026-03-14 13:05:43] 2026-03-14 17:05:01,535 | INFO     | mean x: 1773484967.0386152
[2026-03-14 13:05:43] 2026-03-14 17:05:01,535 | INFO     | mean y: 2627384.019973369
[2026-03-14 13:05:43] 2026-03-14 17:05:01,535 | INFO     | intersect: -12621709127.94092
[2026-03-14 13:05:43] 2026-03-14 17:05:01,536 | INFO     | chi2: 3.0100042917835235
[2026-03-14 13:05:43] 2026-03-14 17:05:01,536 | INFO     | current chi2=3.0100042917835235 (change=31.08963054960788 %)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,537 | INFO     | sum of square deviations: 128720652666.9504
[2026-03-14 13:05:43] 2026-03-14 17:05:01,655 | INFO     | sum of deviations: 820077762228.8517
[2026-03-14 13:05:43] 2026-03-14 17:05:01,656 | INFO     | mean x: 1773485119.5455763
[2026-03-14 13:05:43] 2026-03-14 17:05:01,656 | INFO     | mean y: 2634096.621983914
[2026-03-14 13:05:43] 2026-03-14 17:05:01,656 | INFO     | intersect: -11296218714.093498
[2026-03-14 13:05:43] 2026-03-14 17:05:01,657 | INFO     | chi2: 2.3738186901113
[2026-03-14 13:05:43] 2026-03-14 17:05:01,657 | INFO     | current chi2=2.3738186901113 (change=21.13570413865633 %)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,657 | INFO     | left removable region: 40
[2026-03-14 13:05:43] 2026-03-14 17:05:01,658 | INFO     | sum of square deviations: 115724702187.66515
[2026-03-14 13:05:43] 2026-03-14 17:05:01,788 | INFO     | sum of deviations: 470659958724.9163
[2026-03-14 13:05:43] 2026-03-14 17:05:01,788 | INFO     | mean x: 1773485546.5569444
[2026-03-14 13:05:43] 2026-03-14 17:05:01,788 | INFO     | mean y: 2654224.4166666665
[2026-03-14 13:05:43] 2026-03-14 17:05:01,789 | INFO     | intersect: -7210227885.991537
[2026-03-14 13:05:43] 2026-03-14 17:05:01,790 | INFO     | chi2: 0.980920116780291
[2026-03-14 13:05:43] 2026-03-14 17:05:01,790 | INFO     | current memory leak: 4.07 B/s (using 720 data points, chi2=0.98)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | ..............................
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | . Timing measurements:
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | . get job = 0 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | . initial setup = 56 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,791 | INFO     | . payload setup = 64 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,792 | INFO     | . stage-in = 0 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,792 | INFO     | . payload execution = 46767 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,792 | INFO     | . stage-out = 2 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,792 | INFO     | . log creation = 0 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,792 | INFO     | ..............................
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | 
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | job summary report
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | --------------------------------------------------
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | PanDA job id: 7054059495
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | task id: 48967085
[2026-03-14 13:05:43] 2026-03-14 17:05:01,891 | INFO     | errors: (none)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | pilot state: finished 
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | transexitcode: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | exeerrorcode: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | exeerrordiag: 
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | exitcode: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | exitmsg: OK
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | cpuconsumptiontime: 60194 s
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | nevents: 400
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | neventsw: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:01,892 | INFO     | pid: 3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | pgrp: 3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | corecount: 12
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | event service: False
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | sizes: {0: 2279753, 1: 2279837, 2: 2279837, 3: 2279837, 4: 2280326, 15: 2280326, 46835: 2325252, 46838: 2334250, 46839: 2334306, 46840: 2334500}
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | --------------------------------------------------
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | 
[2026-03-14 13:05:43] 2026-03-14 17:05:01,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-14 13:05:43] 2026-03-14 17:05:01,930 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,933 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:05:43] 2026-03-14 17:05:01,933 | INFO     | job 7054059495 has completed (purged errors)
[2026-03-14 13:05:43] 2026-03-14 17:05:01,933 | INFO     | overall cleanup function is called
[2026-03-14 13:05:43] 2026-03-14 17:05:02,977 | INFO     | --- collectZombieJob: --- 10, [3406856]
[2026-03-14 13:05:43] 2026-03-14 17:05:02,977 | INFO     | zombie collector waiting for pid 3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:02,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:05:43] 2026-03-14 17:05:02,977 | INFO     | collected zombie processes
[2026-03-14 13:05:43] 2026-03-14 17:05:02,978 | INFO     | will attempt to kill all subprocesses of pid=3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:03,611 | INFO     | process IDs to be killed: [3406856] (in reverse order)
[2026-03-14 13:05:43] 2026-03-14 17:05:03,713 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:05:43] 2026-03-14 17:05:03,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:05:43] 2026-03-14 17:05:03,724 | INFO     | did not find any defunct processes belonging to 3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:03,736 | INFO     | did not find any defunct processes belonging to 3406856
[2026-03-14 13:05:43] 2026-03-14 17:05:03,737 | INFO     | ready for new job
[2026-03-14 13:05:43] 2026-03-14 17:05:03,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:05:43] 2026-03-14 17:05:03,774 | INFO     | **************************************
[2026-03-14 13:05:43] 2026-03-14 17:05:03,774 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:05:43] 2026-03-14 17:05:03,774 | INFO     | **************************************
[2026-03-14 13:05:43] 2026-03-14 17:05:03,774 | INFO     | 
[2026-03-14 13:05:43] 2026-03-14 17:05:03,776 | INFO     | architecture information:
[2026-03-14 13:05:43] 2026-03-14 17:05:03,777 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:05:43] 2026-03-14 17:05:03,792 | INFO     | cat /etc/os-release:
[2026-03-14 13:05:43] NAME="CentOS Linux"
[2026-03-14 13:05:43] VERSION="7 (Core)"
[2026-03-14 13:05:43] ID="centos"
[2026-03-14 13:05:43] ID_LIKE="rhel fedora"
[2026-03-14 13:05:43] VERSION_ID="7"
[2026-03-14 13:05:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:05:43] ANSI_COLOR="0;31"
[2026-03-14 13:05:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:05:43] HOME_URL="https://www.centos.org/"
[2026-03-14 13:05:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:05:43] 
[2026-03-14 13:05:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:05:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:05:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:05:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:05:43] 
[2026-03-14 13:05:43] 2026-03-14 17:05:03,793 | INFO     | **************************************
[2026-03-14 13:05:43] 2026-03-14 17:05:04,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-14 13:05:43] 2026-03-14 17:05:04,392 | INFO     | sufficient remaining disk space (51645513728 B)
[2026-03-14 13:05:43] 2026-03-14 17:05:04,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:05:43] 2026-03-14 17:05:04,393 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:05:43] 2026-03-14 17:05:04,393 | INFO     | update_server=False
[2026-03-14 13:05:43] 2026-03-14 17:05:04,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:05:43] 2026-03-14 17:05:04,699 | INFO     | all data control threads have been joined
[2026-03-14 13:05:43] 2026-03-14 17:05:04,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:05:43] 2026-03-14 17:05:04,713 | INFO     | aborting loop
[2026-03-14 13:05:43] 2026-03-14 17:05:04,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:05:43] 2026-03-14 17:05:05,399 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,402 | INFO     | [job] validate thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,445 | INFO     | all payload control threads have been joined
[2026-03-14 13:05:43] 2026-03-14 17:05:05,587 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,631 | INFO     | all job control threads have been joined
[2026-03-14 13:05:43] 2026-03-14 17:05:05,710 | INFO     | [data] control thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,720 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,743 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,874 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:05,903 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:05:43] 2026-03-14 17:05:06,455 | INFO     | [payload] control thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,637 | INFO     | [job] control thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,720 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,725 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,798 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,885 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:06,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:05:43] 2026-03-14 17:05:07,913 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:10,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:05:43] 2026-03-14 17:05:34,563 | INFO     | PID=3399052 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 13:05:43] 2026-03-14 17:05:34,563 | INFO     | .. there are 21 such processes running
[2026-03-14 13:05:43] 2026-03-14 17:05:34,564 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:05:43] 2026-03-14 17:05:34,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:05:43] 2026-03-14 17:05:34,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:05:43] 2026-03-14 17:05:37,220 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:05:43] 2026-03-14 17:05:37,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654869509952)>', '<ExcThread(monitor, started 139654502258432)>']
[2026-03-14 13:05:43] 2026-03-14 17:05:37,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:05:43] 2026-03-14 17:05:37,592 | INFO     | [monitor] control thread has ended
[2026-03-14 13:05:43] 2026-03-14 17:05:42,331 | INFO     | all workflow threads have been joined
[2026-03-14 13:05:43] 2026-03-14 17:05:42,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:05:43] 2026-03-14 17:05:42,331 | INFO     | traces error code: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:42,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:05:43] 2026-03-14 17:05:42,493 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:05:43] 2026-03-14 17:05:42,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:05:43] 2026-03-14 17:05:42,547 [wrapper] pilotpid: 3399052
[2026-03-14 13:05:43] 2026-03-14 17:05:42,567 [wrapper] Pilot exit status: 0
[2026-03-14 13:05:43] 2026-03-14 17:05:42,582 [wrapper] pandaids: 7054059495
[2026-03-14 13:05:43] 2026-03-14 17:05:42,822 [wrapper] cleanup supervisor_pilot  503130 3399053
[2026-03-14 13:05:43] 2026-03-14 17:05:42,826 [wrapper] Test setup, not cleaning
[2026-03-14 13:05:43] 2026-03-14 17:05:42,829 [wrapper] apfmon messages muted
[2026-03-14 13:05:43] 2026-03-14 17:05:42,831 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:05:43] 2026-03-14 17:05:42,833 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:05:43]  *** Error codes and diagnostics ***
[2026-03-14 13:05:43]     "exeErrorCode": 0,
[2026-03-14 13:05:43]     "exeErrorDiag": "",
[2026-03-14 13:05:43]     "pilotErrorCode": 0,
[2026-03-14 13:05:43]     "pilotErrorDiag": "",
[2026-03-14 13:05:43]  *** Listing of results directory ***
[2026-03-14 13:05:43] total 417168
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 18:28 queuedata.json
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 18:28 pilot3.tar.gz
[2026-03-14 13:05:43] -rwx------. 1 boincer umatlas     36322 Mar 13 18:28 runpilot2-wrapper.sh
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:05:43] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:01 run_atlas
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:01 job.xml
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas 212450876 Mar 14 00:01 EVNT.48967083._000883.pool.root.1
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-14 13:05:43] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:01 shared
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas    597523 Mar 14 00:01 input.tar.gz
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:01 boinc_lockfile
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas      2563 Mar 14 00:01 pandaJob.out
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas        57 Mar 14 00:01 setup.sh.local
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:03 agis_schedconf.cvmfs.json
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas       432 Mar 14 00:04 workernode_map.json
[2026-03-14 13:05:43] drwx------. 5 boincer umatlas      4096 Mar 14 00:04 pilot3
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas      6660 Mar 14 13:02 init_data.xml
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas       531 Mar 14 13:03 boinc_task_state.xml
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas 198623358 Mar 14 13:03 HITS.48967085._021758.pool.root.1
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas      1043 Mar 14 13:04 memory_monitor_summary.json
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas   1511579 Mar 14 13:04 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas    896833 Mar 14 13:04 log.48967085._021758.job.log.tgz.1
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas      6385 Mar 14 13:05 heartbeat.json
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas        95 Mar 14 13:05 pilot_heartbeat.json
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas        28 Mar 14 13:05 wrapper_checkpoint.txt
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 13:05 boinc_mmap_file
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas      4820 Mar 14 13:05 pilotlog.txt
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas   5183741 Mar 14 13:05 log.48967085._021758.job.log.1
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas       357 Mar 14 13:05 output.list
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas       620 Mar 14 13:05 runtime_log
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas   6103040 Mar 14 13:05 result.tar.gz
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas       659 Mar 14 13:05 vdKODmfAQL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDme1qLDmyN6FLn.diag
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas      9339 Mar 14 13:05 runtime_log.err
[2026-03-14 13:05:43] -rw-r--r--. 1 boincer umatlas     21024 Mar 14 13:05 stderr.txt
[2026-03-14 13:05:43] HITS file was successfully produced:
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas 198623358 Mar 14 13:03 shared/HITS.pool.root.1
[2026-03-14 13:05:43]  *** Contents of shared directory: ***
[2026-03-14 13:05:43] total 408012
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas 212450876 Mar 14 00:01 ATLAS.root_0
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:01 start_atlas.sh
[2026-03-14 13:05:43] -rw-r--r--. 2 boincer umatlas    597523 Mar 14 00:01 input.tar.gz
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas 198623358 Mar 14 13:03 HITS.pool.root.1
[2026-03-14 13:05:43] -rw-------. 1 boincer umatlas   6103040 Mar 14 13:05 result.tar.gz
13:06:05 (3393430): run_atlas exited; CPU time 61736.519052
13:06:05 (3393430): called boinc_finish(0)

</stderr_txt>
]]>

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