Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:02 (30887): wrapper (7.7.26015): starting
05:06:02 (30887): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 05:06:02] Arguments: --nthreads 12
[2026-03-14 05:06:02] Threads: 12
[2026-03-14 05:06:02] Checking for CVMFS
[2026-03-14 05:06:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 05:06:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 05:06:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 05:06:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 05:06:02] 2.11.2.0 2913 443000 90856 157271 3 52 18050548 20275200 1 130560 1 192091792 99.951 25887978 16965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 05:06:02] CVMFS is ok
[2026-03-14 05:06:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 05:06:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 05:06:02] Further information can be found at the LHC@home message board.
[2026-03-14 05:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 05:06:02] Checking for apptainer binary...
[2026-03-14 05:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 05:06:02] Running /usr/bin/apptainer --version
[2026-03-14 05:06:02] apptainer version 1.3.2-1.el7
[2026-03-14 05:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 05:06:04] c-205-6.aglt2.org
[2026-03-14 05:06:04] apptainer works
[2026-03-14 05:06:04] Set ATHENA_PROC_NUMBER=12
[2026-03-14 05:06:04] Set ATHENA_CORE_NUMBER=12
[2026-03-14 05:06:04] Starting ATLAS job with PandaID=7045746541
[2026-03-14 05:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:13:36]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:13:36]  guid=c89295ec-7ff2-4f3a-97f6-43ab9ea4cd8f
[2026-03-14 06:13:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 06:13:36]  is_altstaged=None
[2026-03-14 06:13:36]  is_tar=False
[2026-03-14 06:13:36]  lfn=log.48955015._023352.job.log.tgz.1
[2026-03-14 06:13:36]  mtime=0
[2026-03-14 06:13:36]  protocol_id=None
[2026-03-14 06:13:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 06:13:36]  replicas=None
[2026-03-14 06:13:36]  scope=mc23_13p6TeV
[2026-03-14 06:13:36]  status=None
[2026-03-14 06:13:36]  status_code=0
[2026-03-14 06:13:36]  storage_token=
[2026-03-14 06:13:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045746541/log.48955015._023352.job.log.tgz.1
[2026-03-14 06:13:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/c3/log.48955015._023352.job.log.tgz.1
[2026-03-14 06:13:36]  workdir=None
[2026-03-14 06:13:36] ]
[2026-03-14 06:13:36] 2026-03-14 10:12:59,646 | INFO     | transferring file log.48955015._023352.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045746541/log.48955015._023352.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 06:13:36] 2026-03-14 10:12:59,646 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045746541/log.48955015._023352.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._023352.job
[2026-03-14 06:13:36] 2026-03-14 10:12:59,667 | INFO     | adding to output.list: log.48955015._023352.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/c3/log.48955015._023352.job.log.tg
[2026-03-14 06:13:36] 2026-03-14 10:12:59,668 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 06:13:36] 2026-03-14 10:12:59,668 | INFO     | summary of transferred files:
[2026-03-14 06:13:36] 2026-03-14 10:12:59,669 | INFO     |  -- lfn=log.48955015._023352.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 06:13:36] 2026-03-14 10:12:59,669 | INFO     | stage-out finished correctly
[2026-03-14 06:13:36] 2026-03-14 10:13:00,821 | INFO     | time since job start (3996s) is within the limit (345600.0s)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,061 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 06:13:36] 2026-03-14 10:13:02,142 | INFO     | job 7045746541 has state=finished
[2026-03-14 06:13:36] 2026-03-14 10:13:02,142 | INFO     | preparing for final server update for job 7045746541 in state='finished'
[2026-03-14 06:13:36] 2026-03-14 10:13:02,142 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045746541/jobReport.json
[2026-03-14 06:13:36] 2026-03-14 10:13:02,145 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 06:13:36] 2026-03-14 10:13:02,146 | INFO     | this job has now completed (state=finished)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,146 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,146 | INFO     | log transfer has been attempted: DONE
[2026-03-14 06:13:36] 2026-03-14 10:13:02,146 | INFO     | job 7045746541 has finished - writing final server update
[2026-03-14 06:13:36] 2026-03-14 10:13:02,147 | INFO     | total number of processed events: 400 (read)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,149 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045746541/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,149 | INFO     | extracted standard info from prmon json
[2026-03-14 06:13:36] 2026-03-14 10:13:02,149 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 06:13:36] 2026-03-14 10:13:02,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 06:13:36] 2026-03-14 10:13:02,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 06:13:36] 2026-03-14 10:13:02,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 06:13:36] 2026-03-14 10:13:02,151 | INFO     | fitting pss+swap vs Time
[2026-03-14 06:13:36] 2026-03-14 10:13:02,151 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | sum of deviations: -1116230947.9999998
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | mean x: 1773481282.0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | mean y: 2677196.1525423727
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | intersect: 31096275877.576283
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | chi2: 0.04559351998729949
[2026-03-14 06:13:36] 2026-03-14 10:13:02,152 | INFO     | current memory leak: -17.53 B/s (using 59 data points, chi2=0.05)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | ..............................
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | . Timing measurements:
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | . get job = 0 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | . initial setup = 7 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | . payload setup = 7 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,153 | INFO     | . stage-in = 0 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,154 | INFO     | . payload execution = 3972 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,154 | INFO     | . stage-out = 0 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,154 | INFO     | . log creation = 0 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,154 | INFO     | ..............................
[2026-03-14 06:13:36] 2026-03-14 10:13:02,231 | INFO     | 
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | job summary report
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | --------------------------------------------------
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | PanDA job id: 7045746541
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | task id: 48955015
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | errors: (none)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,232 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | pilot state: finished 
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | transexitcode: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | exeerrorcode: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | exeerrordiag: 
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | exitcode: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,233 | INFO     | exitmsg: OK
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | cpuconsumptiontime: 42585 s
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | nevents: 400
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | neventsw: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | pid: 6698
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | pgrp: 6698
[2026-03-14 06:13:36] 2026-03-14 10:13:02,234 | INFO     | corecount: 12
[2026-03-14 06:13:36] 2026-03-14 10:13:02,235 | INFO     | event service: False
[2026-03-14 06:13:36] 2026-03-14 10:13:02,235 | INFO     | sizes: {0: 2280238, 11: 2280238, 3983: 2306066, 3984: 2315064, 3986: 2315314}
[2026-03-14 06:13:36] 2026-03-14 10:13:02,235 | INFO     | --------------------------------------------------
[2026-03-14 06:13:36] 2026-03-14 10:13:02,235 | INFO     | 
[2026-03-14 06:13:36] 2026-03-14 10:13:02,235 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 06:13:36] 2026-03-14 10:13:02,258 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,259 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,259 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,259 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,261 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,262 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:13:36] 2026-03-14 10:13:02,262 | INFO     | job 7045746541 has completed (purged errors)
[2026-03-14 06:13:36] 2026-03-14 10:13:02,262 | INFO     | overall cleanup function is called
[2026-03-14 06:13:36] 2026-03-14 10:13:03,270 | INFO     | --- collectZombieJob: --- 10, [6698]
[2026-03-14 06:13:36] 2026-03-14 10:13:03,270 | INFO     | zombie collector waiting for pid 6698
[2026-03-14 06:13:36] 2026-03-14 10:13:03,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:13:36] 2026-03-14 10:13:03,270 | INFO     | collected zombie processes
[2026-03-14 06:13:36] 2026-03-14 10:13:03,270 | INFO     | will attempt to kill all subprocesses of pid=6698
[2026-03-14 06:13:36] 2026-03-14 10:13:03,361 | INFO     | process IDs to be killed: [6698] (in reverse order)
[2026-03-14 06:13:36] 2026-03-14 10:13:03,409 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:13:36] 2026-03-14 10:13:03,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:13:36] 2026-03-14 10:13:03,413 | INFO     | did not find any defunct processes belonging to 6698
[2026-03-14 06:13:36] 2026-03-14 10:13:03,417 | INFO     | did not find any defunct processes belonging to 6698
[2026-03-14 06:13:36] 2026-03-14 10:13:03,417 | INFO     | ready for new job
[2026-03-14 06:13:36] 2026-03-14 10:13:03,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:13:36] 2026-03-14 10:13:03,419 | INFO     | **************************************
[2026-03-14 06:13:36] 2026-03-14 10:13:03,419 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 06:13:36] 2026-03-14 10:13:03,419 | INFO     | **************************************
[2026-03-14 06:13:36] 2026-03-14 10:13:03,419 | INFO     | 
[2026-03-14 06:13:36] 2026-03-14 10:13:03,420 | INFO     | architecture information:
[2026-03-14 06:13:36] 2026-03-14 10:13:03,420 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:13:36] 2026-03-14 10:13:03,434 | INFO     | cat /etc/os-release:
[2026-03-14 06:13:36] NAME="CentOS Linux"
[2026-03-14 06:13:36] VERSION="7 (Core)"
[2026-03-14 06:13:36] ID="centos"
[2026-03-14 06:13:36] ID_LIKE="rhel fedora"
[2026-03-14 06:13:36] VERSION_ID="7"
[2026-03-14 06:13:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:13:36] ANSI_COLOR="0;31"
[2026-03-14 06:13:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:13:36] HOME_URL="https://www.centos.org/"
[2026-03-14 06:13:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:13:36] 
[2026-03-14 06:13:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:13:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:13:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:13:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:13:36] 
[2026-03-14 06:13:36] 2026-03-14 10:13:03,434 | INFO     | **************************************
[2026-03-14 06:13:36] 2026-03-14 10:13:03,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 06:13:36] 2026-03-14 10:13:03,952 | INFO     | sufficient remaining disk space (28902948864 B)
[2026-03-14 06:13:36] 2026-03-14 10:13:03,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:13:36] 2026-03-14 10:13:03,953 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:13:36] 2026-03-14 10:13:03,953 | INFO     | update_server=False
[2026-03-14 06:13:36] 2026-03-14 10:13:03,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:13:36] 2026-03-14 10:13:03,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:13:36] 2026-03-14 10:13:03,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:13:36] 2026-03-14 10:13:04,681 | WARNING  | process 6698 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 06:13:36] 2026-03-14 10:13:04,752 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:13:36] 2026-03-14 10:13:04,836 | INFO     | all payload control threads have been joined
[2026-03-14 06:13:36] 2026-03-14 10:13:04,837 | INFO     | number of running child processes to parent process 6698: 1
[2026-03-14 06:13:36] 2026-03-14 10:13:04,837 | INFO     | maximum number of monitored processes: 6
[2026-03-14 06:13:36] 2026-03-14 10:13:04,837 | INFO     | aborting job monitoring since job object (job id=7045746541) has expired
[2026-03-14 06:13:36] 2026-03-14 10:13:04,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:13:36] 2026-03-14 10:13:04,837 | INFO     | will abort loop
[2026-03-14 06:13:36] 2026-03-14 10:13:04,838 | INFO     | all data control threads have been joined
[2026-03-14 06:13:36] 2026-03-14 10:13:04,957 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:04,959 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,160 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:13:36] 2026-03-14 10:13:05,331 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,367 | INFO     | all job control threads have been joined
[2026-03-14 06:13:36] 2026-03-14 10:13:05,712 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,805 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,842 | INFO     | [payload] control thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,842 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:05,843 | INFO     | [data] control thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:06,290 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:06,292 | INFO     | [job] validate thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:06,321 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:06,373 | INFO     | [job] control thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:07,266 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:07,960 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:14,210 | INFO     | job.realtimelogging is not enabled
[2026-03-14 06:13:36] 2026-03-14 10:13:15,215 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:13:36] 2026-03-14 10:13:30,208 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:13:36] 2026-03-14 10:13:31,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129888909120)>', '<ExcThread(monitor, started 140128894818048)>']
[2026-03-14 06:13:36] 2026-03-14 10:13:34,015 | INFO     | PID=2266 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 06:13:36] 2026-03-14 10:13:34,015 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:13:36] 2026-03-14 10:13:34,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:13:36] 2026-03-14 10:13:34,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:13:36] 2026-03-14 10:13:34,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:13:36] 2026-03-14 10:13:34,016 | INFO     | [monitor] control thread has ended
[2026-03-14 06:13:36] 2026-03-14 10:13:36,216 | INFO     | all workflow threads have been joined
[2026-03-14 06:13:36] 2026-03-14 10:13:36,216 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:13:36] 2026-03-14 10:13:36,216 | INFO     | traces error code: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:36,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:13:36] 2026-03-14 10:13:36,302 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:13:36] 2026-03-14 10:13:36,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:13:36] 2026-03-14 10:13:36,310 [wrapper] pilotpid: 2266
[2026-03-14 06:13:36] 2026-03-14 10:13:36,314 [wrapper] Pilot exit status: 0
[2026-03-14 06:13:36] 2026-03-14 10:13:36,329 [wrapper] pandaids: 7045746541
[2026-03-14 06:13:36] 2026-03-14 10:13:36,368 [wrapper] cleanup supervisor_pilot 25351 2267
[2026-03-14 06:13:36] 2026-03-14 10:13:36,372 [wrapper] Test setup, not cleaning
[2026-03-14 06:13:36] 2026-03-14 10:13:36,376 [wrapper] apfmon messages muted
[2026-03-14 06:13:36] 2026-03-14 10:13:36,380 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:13:36] 2026-03-14 10:13:36,384 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:13:36]  *** Error codes and diagnostics ***
[2026-03-14 06:13:36]     "exeErrorCode": 0,
[2026-03-14 06:13:36]     "exeErrorDiag": "",
[2026-03-14 06:13:36]     "pilotErrorCode": 0,
[2026-03-14 06:13:36]     "pilotErrorDiag": "",
[2026-03-14 06:13:36]  *** Listing of results directory ***
[2026-03-14 06:13:36] total 613884
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 23:09 pilot3.tar.gz
[2026-03-14 06:13:36] -rwx------ 1 boincer umatlas     36322 Mar 13 23:10 runpilot2-wrapper.sh
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 23:12 queuedata.json
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas       100 Mar 14 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:13:36] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 05:06 run_atlas
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas       105 Mar 14 05:06 job.xml
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas 439655389 Mar 14 05:06 EVNT.46701403._002524.pool.root.1
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 05:06 start_atlas.sh
[2026-03-14 06:13:36] drwxrwx--x 2 boincer umatlas      4096 Mar 14 05:06 shared
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 05:06 input.tar.gz
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas         0 Mar 14 05:06 boinc_lockfile
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas      2572 Mar 14 05:06 pandaJob.out
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas        57 Mar 14 05:06 setup.sh.local
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas   1004579 Mar 14 05:06 agis_schedconf.cvmfs.json
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas   1511579 Mar 14 05:06 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas       433 Mar 14 05:06 workernode_map.json
[2026-03-14 06:13:36] drwx------ 5 boincer umatlas      4096 Mar 14 05:06 pilot3
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas 183005994 Mar 14 06:12 HITS.48955015._023352.pool.root.1
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas       531 Mar 14 06:12 boinc_task_state.xml
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 06:12 init_data.xml
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas      1058 Mar 14 06:12 memory_monitor_summary.json
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas    417877 Mar 14 06:12 log.48955015._023352.job.log.tgz.1
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas      6402 Mar 14 06:13 heartbeat.json
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 06:13 boinc_mmap_file
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas        27 Mar 14 06:13 wrapper_checkpoint.txt
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas        95 Mar 14 06:13 pilot_heartbeat.json
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas      5328 Mar 14 06:13 pilotlog.txt
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas    588137 Mar 14 06:13 log.48955015._023352.job.log.1
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas       357 Mar 14 06:13 output.list
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas       620 Mar 14 06:13 runtime_log
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas   1024000 Mar 14 06:13 result.tar.gz
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 06:13 runtime_log.err
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas       658 Mar 14 06:13 fbpLDmrZUL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWtrLDml93p6m.diag
[2026-03-14 06:13:36] -rw-r--r-- 1 boincer umatlas     21335 Mar 14 06:13 stderr.txt
[2026-03-14 06:13:36] HITS file was successfully produced:
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas 183005994 Mar 14 06:12 shared/HITS.pool.root.1
[2026-03-14 06:13:36]  *** Contents of shared directory: ***
[2026-03-14 06:13:36] total 609680
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas 439655389 Mar 14 05:06 ATLAS.root_0
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 05:06 start_atlas.sh
[2026-03-14 06:13:36] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 05:06 input.tar.gz
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas 183005994 Mar 14 06:12 HITS.pool.root.1
[2026-03-14 06:13:36] -rw------- 1 boincer umatlas   1024000 Mar 14 06:13 result.tar.gz
06:13:37 (30887): run_atlas exited; CPU time 42567.054508
06:13:37 (30887): called boinc_finish(0)

</stderr_txt>
]]>

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