Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:45:10 (2305942): wrapper (7.7.26015): starting
13:45:10 (2305942): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 13:45:10] Arguments: --nthreads 3
[2026-03-14 13:45:10] Threads: 3
[2026-03-14 13:45:10] Checking for CVMFS
[2026-03-14 13:45:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 13:45:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 13:45:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 13:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 13:45:11] 2.9.2.0 12665 17433 72628 157278 1 50 22407051 36864000 0 130560 0 6416743 99.980 658976 15898 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 13:45:11] CVMFS is ok
[2026-03-14 13:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 13:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 13:45:11] Further information can be found at the LHC@home message board.
[2026-03-14 13:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 13:45:11] Checking for apptainer binary...
[2026-03-14 13:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 13:45:11] Running /usr/bin/apptainer --version
[2026-03-14 13:45:11] apptainer version 1.4.1-1.1
[2026-03-14 13:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 13:45:11] thA335
[2026-03-14 13:45:11] apptainer works
[2026-03-14 13:45:11] Set ATHENA_PROC_NUMBER=3
[2026-03-14 13:45:11] Set ATHENA_CORE_NUMBER=3
[2026-03-14 13:45:12] Starting ATLAS job with PandaID=7054059293
[2026-03-14 13:45:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 15:37:06]  *** The last 200 lines of the pilot log: ***
[2026-03-14 15:37:06] 2026-03-14 14:36:36,610 | INFO     | update_server=False
[2026-03-14 15:37:06] 2026-03-14 14:36:36,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 15:37:06] 2026-03-14 14:36:36,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 15:37:06] 2026-03-14 14:36:36,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 15:37:06] 2026-03-14 14:36:36,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 15:37:06] 2026-03-14 14:36:36,612 | INFO     | will abort loop
[2026-03-14 15:37:06] 2026-03-14 14:36:37,311 | INFO     | all payload control threads have been joined
[2026-03-14 15:37:06] 2026-03-14 14:36:37,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 15:37:06] 2026-03-14 14:36:37,403 | INFO     | all job control threads have been joined
[2026-03-14 15:37:06] 2026-03-14 14:36:37,616 | INFO     | [job] queue monitor thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:37,617 | INFO     | [job] retrieve thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:37,617 | INFO     | [job] job monitor thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:37,618 | INFO     | [monitor] cgroup control has ended
[2026-03-14 15:37:06] 2026-03-14 14:36:37,686 | INFO     | all data control threads have been joined
[2026-03-14 15:37:06] 2026-03-14 14:36:38,001 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,235 | INFO     | [payload] validate_post thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,317 | INFO     | [payload] control thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,409 | INFO     | [job] control thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,498 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,692 | INFO     | [data] control thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,768 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,839 | INFO     | [job] validate thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,883 | INFO     | [data] copytool_in thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:38,917 | INFO     | [payload] failed_post thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:39,358 | INFO     | [data] copytool_out thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:40,617 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:47,633 | INFO     | job.realtimelogging is not enabled
[2026-03-14 15:37:06] 2026-03-14 14:36:48,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 15:37:06] 2026-03-14 14:36:49,479 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745894381376)>', '<ExcThread(monitor, started 139745258620672)>']
[2026-03-14 15:37:06] 2026-03-14 14:36:54,505 | INFO     | all workflow threads have been joined
[2026-03-14 15:37:06] 2026-03-14 14:36:54,505 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 15:37:06] 2026-03-14 14:36:54,506 | INFO     | traces error code: 0
[2026-03-14 15:37:06] 2026-03-14 14:36:54,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 15:37:06] 2026-03-14 14:37:06,527 | INFO     | PID=2309997 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 15:37:06] 2026-03-14 14:37:06,527 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 15:37:06] 2026-03-14 14:37:06,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 15:37:06] 2026-03-14 14:37:06,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 15:37:06] 2026-03-14 14:37:06,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 15:37:06] 2026-03-14 14:37:06,528 | INFO     | [monitor] control thread has ended
[2026-03-14 15:37:06] 2026-03-14 14:37:06,574 [wrapper] ==== pilot stdout END ====
[2026-03-14 15:37:06] 2026-03-14 14:37:06,577 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 15:37:06] 2026-03-14 14:37:06,581 [wrapper] pilotpid: 2309997
[2026-03-14 15:37:06] 2026-03-14 14:37:06,584 [wrapper] Pilot exit status: 0
[2026-03-14 15:37:06] 2026-03-14 14:37:06,591 [wrapper] pandaids: 7054059293
[2026-03-14 15:37:06] 2026-03-14 14:37:06,606 [wrapper] cleanup supervisor_pilot 2320024 2309998
[2026-03-14 15:37:06] 2026-03-14 14:37:06,609 [wrapper] Test setup, not cleaning
[2026-03-14 15:37:06] 2026-03-14 14:37:06,612 [wrapper] apfmon messages muted
[2026-03-14 15:37:06] 2026-03-14 14:37:06,615 [wrapper] ==== wrapper stdout END ====
[2026-03-14 15:37:06] 2026-03-14 14:37:06,617 [wrapper] ==== wrapper stderr END ====
[2026-03-14 15:37:06]  *** Error codes and diagnostics ***
[2026-03-14 15:37:06]     "exeErrorCode": 0,
[2026-03-14 15:37:06]     "exeErrorDiag": "",
[2026-03-14 15:37:06]     "pilotErrorCode": 0,
[2026-03-14 15:37:06]     "pilotErrorDiag": "",
[2026-03-14 15:37:06]  *** Listing of results directory ***
[2026-03-14 15:37:06] total 404584
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc    585013 Mar 13 23:28 pilot3.tar.gz
[2026-03-14 15:37:06] -rwx------ 1 boinc boinc     36322 Mar 13 23:31 runpilot2-wrapper.sh
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      5111 Mar 13 23:33 queuedata.json
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc       100 Mar 14 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 15:37:06] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 13:45 run_atlas
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc       105 Mar 14 13:45 job.xml
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc 213392385 Mar 14 13:45 EVNT.48967083._000875.pool.root.1
[2026-03-14 15:37:06] drwxrwx--x 2 boinc boinc      4096 Mar 14 13:45 shared
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc    597528 Mar 14 13:45 input.tar.gz
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:45 start_atlas.sh
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:45 boinc_setup_complete
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      6195 Mar 14 13:45 init_data.xml
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc         0 Mar 14 13:45 boinc_lockfile
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      2563 Mar 14 13:45 pandaJob.out
[2026-03-14 15:37:06] -rw------- 1 boinc boinc   1004579 Mar 14 13:45 agis_schedconf.cvmfs.json
[2026-03-14 15:37:06] -rw------- 1 boinc boinc   1511579 Mar 14 13:45 agis_ddmendpoints.agis.ALL.json
[2026-03-14 15:37:06] -rw------- 1 boinc boinc       425 Mar 14 13:45 workernode_map.json
[2026-03-14 15:37:06] drwx------ 5 boinc boinc      4096 Mar 14 13:45 pilot3
[2026-03-14 15:37:06] -rw------- 1 boinc boinc 194483576 Mar 14 15:36 HITS.48967085._021556.pool.root.1
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc       529 Mar 14 15:36 boinc_task_state.xml
[2026-03-14 15:37:06] -rw------- 1 boinc boinc      1015 Mar 14 15:36 memory_monitor_summary.json
[2026-03-14 15:37:06] -rw------- 1 boinc boinc    289739 Mar 14 15:36 log.48967085._021556.job.log.tgz.1
[2026-03-14 15:37:06] -rw------- 1 boinc boinc      6307 Mar 14 15:36 heartbeat.json
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      8192 Mar 14 15:36 boinc_mmap_file
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc        27 Mar 14 15:36 wrapper_checkpoint.txt
[2026-03-14 15:37:06] -rw------- 1 boinc boinc       747 Mar 14 15:37 pilotlog.txt
[2026-03-14 15:37:06] -rw------- 1 boinc boinc        95 Mar 14 15:37 pilot_heartbeat.json
[2026-03-14 15:37:06] -rw------- 1 boinc boinc    961851 Mar 14 15:37 log.48967085._021556.job.log.1
[2026-03-14 15:37:06] -rw------- 1 boinc boinc       357 Mar 14 15:37 output.list
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc       620 Mar 14 15:37 runtime_log
[2026-03-14 15:37:06] -rw------- 1 boinc boinc   1269760 Mar 14 15:37 result.tar.gz
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      8896 Mar 14 15:37 runtime_log.err
[2026-03-14 15:37:06] -rw------- 1 boinc boinc       657 Mar 14 15:37 IfVKDmFDQL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9RoLDm7Wp2En.diag
[2026-03-14 15:37:06] -rw-r--r-- 1 boinc boinc      7511 Mar 14 15:37 stderr.txt
[2026-03-14 15:37:06] HITS file was successfully produced:
[2026-03-14 15:37:06] -rw------- 1 boinc boinc 194483576 Mar 14 15:36 shared/HITS.pool.root.1
[2026-03-14 15:37:06]  *** Contents of shared directory: ***
[2026-03-14 15:37:06] total 400168
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc 213392385 Mar 14 13:45 ATLAS.root_0
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc    597528 Mar 14 13:45 input.tar.gz
[2026-03-14 15:37:06] -rw-r--r-- 2 boinc boinc     15845 Mar 14 13:45 start_atlas.sh
[2026-03-14 15:37:06] -rw------- 1 boinc boinc 194483576 Mar 14 15:36 HITS.pool.root.1
[2026-03-14 15:37:06] -rw------- 1 boinc boinc   1269760 Mar 14 15:37 result.tar.gz
15:37:07 (2305942): run_atlas exited; CPU time 18976.136706
15:37:07 (2305942): called boinc_finish(0)

</stderr_txt>
]]>

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