Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:26 (20651): wrapper (7.7.26015): starting
16:41:26 (20651): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 16:41:26] Arguments: --nthreads 8
[2026-03-14 16:41:26] Threads: 8
[2026-03-14 16:41:26] Checking for CVMFS
[2026-03-14 16:41:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 16:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 16:41:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 16:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 16:41:29] 2.11.2.0 11565 127768 134672 157282 3 93 21602140 25165824 1088 130560 162 31354928 99.792 28648770 961 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 16:41:29] CVMFS is ok
[2026-03-14 16:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:41:29] Checking for apptainer binary...
[2026-03-14 16:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 16:41:29] Running /usr/bin/apptainer --version
[2026-03-14 16:41:30] apptainer version 1.3.2-1.el7
[2026-03-14 16:41:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:41:41] cg-vwn374.simple-grid.lan
[2026-03-14 16:41:41] apptainer works
[2026-03-14 16:41:41] Set ATHENA_PROC_NUMBER=8
[2026-03-14 16:41:41] Set ATHENA_CORE_NUMBER=8
[2026-03-14 16:41:41] Starting ATLAS job with PandaID=7045699753
[2026-03-14 16:41:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 20:32:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 20:32:27] 2026-03-14 19:31:33,579 | INFO     | chi2: 2.1666149070632765
[2026-03-14 20:32:27] 2026-03-14 19:31:33,579 | INFO     | current chi2=2.1666149070632765 (change=69.65025922953707 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,579 | INFO     | sum of square deviations: 2671343110.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,581 | INFO     | sum of deviations: -3443761466.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,581 | INFO     | mean x: 1773510417.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,581 | INFO     | mean y: 2497970.2195121953
[2026-03-14 20:32:27] 2026-03-14 19:31:33,581 | INFO     | intersect: 2288818589.5180907
[2026-03-14 20:32:27] 2026-03-14 19:31:33,582 | INFO     | chi2: 0.11383429827041146
[2026-03-14 20:32:27] 2026-03-14 19:31:33,582 | INFO     | current chi2=0.11383429827041146 (change=94.74598379715262 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,582 | INFO     | sum of square deviations: 2480604650.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,584 | INFO     | sum of deviations: -6712206491.999995
[2026-03-14 20:32:27] 2026-03-14 19:31:33,584 | INFO     | mean x: 1773510569.5
[2026-03-14 20:32:27] 2026-03-14 19:31:33,584 | INFO     | mean y: 2500525.22
[2026-03-14 20:32:27] 2026-03-14 19:31:33,584 | INFO     | intersect: 4801398712.494021
[2026-03-14 20:32:27] 2026-03-14 19:31:33,584 | INFO     | chi2: 0.07739377284960246
[2026-03-14 20:32:27] 2026-03-14 19:31:33,585 | INFO     | current chi2=0.07739377284960246 (change=32.011903243998695 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,585 | INFO     | sum of square deviations: 2299168690.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | sum of deviations: -95905298.0000022
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | mean x: 1773510722.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | mean y: 2494958.671794872
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | intersect: 76473468.83479169
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | chi2: 0.042606772345692
[2026-03-14 20:32:27] 2026-03-14 19:31:33,587 | INFO     | current chi2=0.042606772345692 (change=44.94806135309005 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,588 | INFO     | sum of square deviations: 2126802667.5
[2026-03-14 20:32:27] 2026-03-14 19:31:33,589 | INFO     | sum of deviations: 5591196926.000001
[2026-03-14 20:32:27] 2026-03-14 19:31:33,589 | INFO     | mean x: 1773510874.5
[2026-03-14 20:32:27] 2026-03-14 19:31:33,590 | INFO     | mean y: 2489955.3368421053
[2026-03-14 20:32:27] 2026-03-14 19:31:33,590 | INFO     | intersect: -4659930635.562653
[2026-03-14 20:32:27] 2026-03-14 19:31:33,590 | INFO     | chi2: 0.0002921973954550673
[2026-03-14 20:32:27] 2026-03-14 19:31:33,590 | INFO     | current chi2=0.0002921973954550673 (change=99.31419964628085 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,591 | INFO     | sum of square deviations: 1963274020.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,593 | INFO     | sum of deviations: 4778102793.999999
[2026-03-14 20:32:27] 2026-03-14 19:31:33,593 | INFO     | mean x: 1773511027.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,593 | INFO     | mean y: 2490713.4432432433
[2026-03-14 20:32:27] 2026-03-14 19:31:33,593 | INFO     | intersect: -4313777880.228927
[2026-03-14 20:32:27] 2026-03-14 19:31:33,593 | INFO     | chi2: 0.00013364759165528347
[2026-03-14 20:32:27] 2026-03-14 19:31:33,594 | INFO     | current chi2=0.00013364759165528347 (change=54.26119680254469 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,594 | INFO     | sum of square deviations: 1808350185.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,595 | INFO     | sum of deviations: 4259924263.9999995
[2026-03-14 20:32:27] 2026-03-14 19:31:33,595 | INFO     | mean x: 1773511179.5
[2026-03-14 20:32:27] 2026-03-14 19:31:33,596 | INFO     | mean y: 2491223.5555555555
[2026-03-14 20:32:27] 2026-03-14 19:31:33,596 | INFO     | intersect: -4175362915.9220304
[2026-03-14 20:32:27] 2026-03-14 19:31:33,596 | INFO     | chi2: 0.00011096749093786704
[2026-03-14 20:32:27] 2026-03-14 19:31:33,596 | INFO     | current chi2=0.00011096749093786704 (change=16.970078125998032 %)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,596 | INFO     | left removable region: 70
[2026-03-14 20:32:27] 2026-03-14 19:31:33,597 | INFO     | sum of square deviations: 832722590.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,598 | INFO     | sum of deviations: 1870153616.0000002
[2026-03-14 20:32:27] 2026-03-14 19:31:33,598 | INFO     | mean x: 1773512064.0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,598 | INFO     | mean y: 2493517.820143885
[2026-03-14 20:32:27] 2026-03-14 19:31:33,598 | INFO     | intersect: -3980513595.640323
[2026-03-14 20:32:27] 2026-03-14 19:31:33,598 | INFO     | chi2: 7.786175861365034e-05
[2026-03-14 20:32:27] 2026-03-14 19:31:33,599 | INFO     | current memory leak: 2.25 B/s (using 139 data points, chi2=0.00)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | ..............................
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | . Timing measurements:
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | . get job = 0 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | . initial setup = 110 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | . payload setup = 158 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,600 | INFO     | . stage-in = 0 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,601 | INFO     | . payload execution = 13234 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,601 | INFO     | . stage-out = 1 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,601 | INFO     | . log creation = 0 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,601 | INFO     | ..............................
[2026-03-14 20:32:27] 2026-03-14 19:31:33,981 | INFO     | 
[2026-03-14 20:32:27] 2026-03-14 19:31:33,981 | INFO     | job summary report
[2026-03-14 20:32:27] 2026-03-14 19:31:33,981 | INFO     | --------------------------------------------------
[2026-03-14 20:32:27] 2026-03-14 19:31:33,981 | INFO     | PanDA job id: 7045699753
[2026-03-14 20:32:27] 2026-03-14 19:31:33,981 | INFO     | task id: 48955015
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | errors: (none)
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | pilot state: finished 
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | transexitcode: 0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | exeerrorcode: 0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | exeerrordiag: 
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | exitcode: 0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,982 | INFO     | exitmsg: OK
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | cpuconsumptiontime: 53023 s
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | nevents: 400
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | neventsw: 0
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | pid: 29113
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | pgrp: 29113
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | corecount: 8
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | event service: False
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | sizes: {0: 2279148, 1: 2279834, 2: 2280295, 13: 2280295, 13395: 2310498, 13396: 2310497, 13398: 2319681, 13399: 2319737, 13402: 2319931}
[2026-03-14 20:32:27] 2026-03-14 19:31:33,983 | INFO     | --------------------------------------------------
[2026-03-14 20:32:27] 2026-03-14 19:31:33,984 | INFO     | 
[2026-03-14 20:32:27] 2026-03-14 19:31:33,984 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-14 20:32:27] 2026-03-14 19:31:34,039 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 20:32:27] 2026-03-14 19:31:34,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 20:32:27] 2026-03-14 19:31:34,042 | INFO     | job 7045699753 has completed (purged errors)
[2026-03-14 20:32:27] 2026-03-14 19:31:34,042 | INFO     | overall cleanup function is called
[2026-03-14 20:32:27] 2026-03-14 19:31:35,050 | INFO     | --- collectZombieJob: --- 10, [29113]
[2026-03-14 20:32:27] 2026-03-14 19:31:35,051 | INFO     | zombie collector waiting for pid 29113
[2026-03-14 20:32:27] 2026-03-14 19:31:35,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 20:32:27] 2026-03-14 19:31:35,051 | INFO     | collected zombie processes
[2026-03-14 20:32:27] 2026-03-14 19:31:35,051 | INFO     | will attempt to kill all subprocesses of pid=29113
[2026-03-14 20:32:27] 2026-03-14 19:31:35,124 | INFO     | process IDs to be killed: [29113] (in reverse order)
[2026-03-14 20:32:27] 2026-03-14 19:31:35,190 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 20:32:27] 2026-03-14 19:31:35,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 20:32:27] 2026-03-14 19:31:35,193 | INFO     | did not find any defunct processes belonging to 29113
[2026-03-14 20:32:27] 2026-03-14 19:31:35,194 | INFO     | did not find any defunct processes belonging to 29113
[2026-03-14 20:32:27] 2026-03-14 19:31:35,195 | INFO     | ready for new job
[2026-03-14 20:32:27] 2026-03-14 19:31:35,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 20:32:27] 2026-03-14 19:31:35,197 | INFO     | **************************************
[2026-03-14 20:32:27] 2026-03-14 19:31:35,197 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 20:32:27] 2026-03-14 19:31:35,197 | INFO     | **************************************
[2026-03-14 20:32:27] 2026-03-14 19:31:35,197 | INFO     | 
[2026-03-14 20:32:27] 2026-03-14 19:31:35,198 | INFO     | pilot is running in a VM
[2026-03-14 20:32:27] 2026-03-14 19:31:35,198 | INFO     | architecture information:
[2026-03-14 20:32:27] 2026-03-14 19:31:35,199 | INFO     | executing command: cat /etc/os-release
[2026-03-14 20:32:27] 2026-03-14 19:31:35,220 | INFO     | cat /etc/os-release:
[2026-03-14 20:32:27] NAME="CentOS Linux"
[2026-03-14 20:32:27] VERSION="7 (Core)"
[2026-03-14 20:32:27] ID="centos"
[2026-03-14 20:32:27] ID_LIKE="rhel fedora"
[2026-03-14 20:32:27] VERSION_ID="7"
[2026-03-14 20:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 20:32:27] ANSI_COLOR="0;31"
[2026-03-14 20:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 20:32:27] HOME_URL="https://www.centos.org/"
[2026-03-14 20:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 20:32:27] 
[2026-03-14 20:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 20:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 20:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 20:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 20:32:27] 
[2026-03-14 20:32:27] 2026-03-14 19:31:35,221 | INFO     | **************************************
[2026-03-14 20:32:27] 2026-03-14 19:31:35,724 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-14 20:32:27] 2026-03-14 19:31:35,758 | INFO     | sufficient remaining disk space (493806944256 B)
[2026-03-14 20:32:27] 2026-03-14 19:31:35,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 20:32:27] 2026-03-14 19:31:35,759 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 20:32:27] 2026-03-14 19:31:35,759 | INFO     | update_server=False
[2026-03-14 20:32:27] 2026-03-14 19:31:35,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 20:32:27] 2026-03-14 19:31:35,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:32:27] 2026-03-14 19:31:35,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 20:32:27] 2026-03-14 19:31:35,761 | INFO     | aborting loop
[2026-03-14 20:32:27] 2026-03-14 19:31:36,016 | INFO     | all payload control threads have been joined
[2026-03-14 20:32:27] 2026-03-14 19:31:36,186 | INFO     | all data control threads have been joined
[2026-03-14 20:32:27] 2026-03-14 19:31:36,726 | INFO     | all job control threads have been joined
[2026-03-14 20:32:27] 2026-03-14 19:31:36,765 | INFO     | [job] retrieve thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:36,767 | INFO     | [job] job monitor thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:36,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 20:32:27] 2026-03-14 19:31:37,022 | INFO     | [payload] control thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,192 | INFO     | [data] control thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,314 | INFO     | [data] copytool_in thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,346 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,501 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,731 | INFO     | [job] control thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,762 | INFO     | [data] copytool_out thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:37,887 | INFO     | [job] validate thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:38,049 | INFO     | [payload] validate_post thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:38,072 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:38,134 | INFO     | [payload] failed_post thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:38,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:32:27] 2026-03-14 19:31:39,726 | INFO     | [job] queue monitor thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:40,792 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:31:45,845 | INFO     | job.realtimelogging is not enabled
[2026-03-14 20:32:27] 2026-03-14 19:31:46,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 20:32:27] 2026-03-14 19:32:06,344 | INFO     | PID=24637 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 20:32:27] 2026-03-14 19:32:06,344 | INFO     | .. there are 2 such processes running
[2026-03-14 20:32:27] 2026-03-14 19:32:06,344 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 20:32:27] 2026-03-14 19:32:06,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 20:32:27] 2026-03-14 19:32:06,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 20:32:27] 2026-03-14 19:32:20,780 | INFO     | [monitor] cgroup control has ended
[2026-03-14 20:32:27] 2026-03-14 19:32:22,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764953462592)>', '<ExcThread(monitor, started 139764518864640)>']
[2026-03-14 20:32:27] 2026-03-14 19:32:23,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 20:32:27] 2026-03-14 19:32:23,427 | INFO     | [monitor] control thread has ended
[2026-03-14 20:32:27] 2026-03-14 19:32:27,505 | INFO     | all workflow threads have been joined
[2026-03-14 20:32:27] 2026-03-14 19:32:27,505 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 20:32:27] 2026-03-14 19:32:27,505 | INFO     | traces error code: 0
[2026-03-14 20:32:27] 2026-03-14 19:32:27,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 20:32:27] 2026-03-14 19:32:27,659 [wrapper] ==== pilot stdout END ====
[2026-03-14 20:32:27] 2026-03-14 19:32:27,665 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 20:32:27] 2026-03-14 19:32:27,670 [wrapper] pilotpid: 24637
[2026-03-14 20:32:27] 2026-03-14 19:32:27,674 [wrapper] Pilot exit status: 0
[2026-03-14 20:32:27] 2026-03-14 19:32:27,691 [wrapper] pandaids: 7045699753
[2026-03-14 20:32:27] 2026-03-14 19:32:27,728 [wrapper] cleanup supervisor_pilot  3948 24638
[2026-03-14 20:32:27] 2026-03-14 19:32:27,732 [wrapper] Test setup, not cleaning
[2026-03-14 20:32:27] 2026-03-14 19:32:27,745 [wrapper] apfmon messages muted
[2026-03-14 20:32:27] 2026-03-14 19:32:27,751 [wrapper] ==== wrapper stdout END ====
[2026-03-14 20:32:27] 2026-03-14 19:32:27,757 [wrapper] ==== wrapper stderr END ====
[2026-03-14 20:32:27]  *** Error codes and diagnostics ***
[2026-03-14 20:32:27]     "exeErrorCode": 0,
[2026-03-14 20:32:27]     "exeErrorDiag": "",
[2026-03-14 20:32:27]     "pilotErrorCode": 0,
[2026-03-14 20:32:27]     "pilotErrorDiag": "",
[2026-03-14 20:32:27]  *** Listing of results directory ***
[2026-03-14 20:32:27] total 624284
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc    585013 Mar 14 04:09 pilot3.tar.gz
[2026-03-14 20:32:27] -rwx------. 1 boinc boinc     36322 Mar 14 04:10 runpilot2-wrapper.sh
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc      5111 Mar 14 04:10 queuedata.json
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 20:32:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:41 run_atlas
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:41 job.xml
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc      6392 Mar 14 16:41 init_data.xml
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc 442555838 Mar 14 16:41 EVNT.46701403._002519.pool.root.1
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:41 start_atlas.sh
[2026-03-14 20:32:27] drwxrwx--x. 2 boinc boinc        68 Mar 14 16:41 shared
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc    597534 Mar 14 16:41 input.tar.gz
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:41 boinc_lockfile
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc      2572 Mar 14 16:41 pandaJob.out
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc       415 Mar 14 16:47 workernode_map.json
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc   1004579 Mar 14 16:47 agis_schedconf.cvmfs.json
[2026-03-14 20:32:27] drwx------. 5 boinc boinc      4096 Mar 14 16:47 pilot3
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc 188048314 Mar 14 20:30 HITS.48955015._023078.pool.root.1
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc       531 Mar 14 20:31 boinc_task_state.xml
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc        95 Mar 14 20:31 pilot_heartbeat.json
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc      1011 Mar 14 20:31 memory_monitor_summary.json
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc   1511579 Mar 14 20:31 agis_ddmendpoints.agis.ALL.json
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc    467262 Mar 14 20:31 log.48955015._023078.job.log.tgz.1
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc      6312 Mar 14 20:31 heartbeat.json
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc      8192 Mar 14 20:32 boinc_mmap_file
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc        28 Mar 14 20:32 wrapper_checkpoint.txt
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc      4953 Mar 14 20:32 pilotlog.txt
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc   1901400 Mar 14 20:32 log.48955015._023078.job.log.1
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc       357 Mar 14 20:32 output.list
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc       620 Mar 14 20:32 runtime_log
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc   2385920 Mar 14 20:32 result.tar.gz
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc      8832 Mar 14 20:32 runtime_log.err
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc       655 Mar 14 20:32 lXnNDmHZUL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmq8oLDmCBlZSm.diag
[2026-03-14 20:32:27] -rw-r--r--. 1 boinc boinc     20664 Mar 14 20:32 stderr.txt
[2026-03-14 20:32:27] HITS file was successfully produced:
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc 188048314 Mar 14 20:30 shared/HITS.pool.root.1
[2026-03-14 20:32:27]  *** Contents of shared directory: ***
[2026-03-14 20:32:27] total 618760
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc 442555838 Mar 14 16:41 ATLAS.root_0
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:41 start_atlas.sh
[2026-03-14 20:32:27] -rw-r--r--. 2 boinc boinc    597534 Mar 14 16:41 input.tar.gz
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc 188048314 Mar 14 20:30 HITS.pool.root.1
[2026-03-14 20:32:27] -rw-------. 1 boinc boinc   2385920 Mar 14 20:32 result.tar.gz
20:32:29 (20651): run_atlas exited; CPU time 53178.060734
20:32:29 (20651): called boinc_finish(0)

</stderr_txt>
]]>

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