Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:27 (2082): wrapper (7.7.26015): starting
04:53:27 (2082): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 04:53:27] Arguments: --nthreads 12
[2026-03-14 04:53:27] Threads: 12
[2026-03-14 04:53:27] Checking for CVMFS
[2026-03-14 04:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 04:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 04:53:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 04:53:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 04:53:27] 2.11.2.0 2947 442941 99040 157271 0 52 16902287 20275200 1 130560 1 192465210 99.956 25128593 15683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 04:53:27] CVMFS is ok
[2026-03-14 04:53:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:53:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:53:28] Further information can be found at the LHC@home message board.
[2026-03-14 04:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:53:28] Checking for apptainer binary...
[2026-03-14 04:53:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 04:53:28] Running /usr/bin/apptainer --version
[2026-03-14 04:53:28] apptainer version 1.3.2-1.el7
[2026-03-14 04:53:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:53:29] c-205-18.aglt2.org
[2026-03-14 04:53:29] apptainer works
[2026-03-14 04:53:29] Set ATHENA_PROC_NUMBER=12
[2026-03-14 04:53:29] Set ATHENA_CORE_NUMBER=12
[2026-03-14 04:53:29] Starting ATLAS job with PandaID=7045651698
[2026-03-14 04:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 06:02:01]  *** The last 200 lines of the pilot log: ***
[2026-03-14 06:02:01]  is_altstaged=None
[2026-03-14 06:02:01]  is_tar=False
[2026-03-14 06:02:01]  lfn=log.48955015._022670.job.log.tgz.1
[2026-03-14 06:02:01]  mtime=0
[2026-03-14 06:02:01]  protocol_id=None
[2026-03-14 06:02:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 06:02:01]  replicas=None
[2026-03-14 06:02:01]  scope=mc23_13p6TeV
[2026-03-14 06:02:01]  status=None
[2026-03-14 06:02:01]  status_code=0
[2026-03-14 06:02:01]  storage_token=
[2026-03-14 06:02:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045651698/log.48955015._022670.job.log.tgz.1
[2026-03-14 06:02:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/19/log.48955015._022670.job.log.tgz.1
[2026-03-14 06:02:01]  workdir=None
[2026-03-14 06:02:01] ]
[2026-03-14 06:02:01] 2026-03-14 10:01:05,239 | INFO     | transferring file log.48955015._022670.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045651698/log.48955015._022670.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 06:02:01] 2026-03-14 10:01:05,239 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045651698/log.48955015._022670.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._022670.job
[2026-03-14 06:02:01] 2026-03-14 10:01:05,260 | INFO     | adding to output.list: log.48955015._022670.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/19/log.48955015._022670.job.log.tg
[2026-03-14 06:02:01] 2026-03-14 10:01:05,261 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 06:02:01] 2026-03-14 10:01:05,262 | INFO     | summary of transferred files:
[2026-03-14 06:02:01] 2026-03-14 10:01:05,262 | INFO     |  -- lfn=log.48955015._022670.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 06:02:01] 2026-03-14 10:01:05,262 | INFO     | stage-out finished correctly
[2026-03-14 06:02:01] 2026-03-14 10:01:05,601 | INFO     | PID=5839 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 06:02:01] 2026-03-14 10:01:06,602 | INFO     | time since job start (4037s) is within the limit (345600.0s)
[2026-03-14 06:02:01] 2026-03-14 10:01:08,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 06:02:01] 2026-03-14 10:01:08,613 | INFO     | time since job start (4039s) is within the limit (345600.0s)
[2026-03-14 06:02:01] 2026-03-14 10:01:09,785 | WARNING  | process 10302 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 06:02:01] 2026-03-14 10:01:09,785 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045651698/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:02:01] 2026-03-14 10:01:09,871 | INFO     | number of running child processes to parent process 10302: 1
[2026-03-14 06:02:01] 2026-03-14 10:01:09,872 | INFO     | maximum number of monitored processes: 6
[2026-03-14 06:02:01] 2026-03-14 10:01:10,620 | INFO     | time since job start (4041s) is within the limit (345600.0s)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,338 | INFO     | job 7045651698 has state=finished
[2026-03-14 06:02:01] 2026-03-14 10:01:11,338 | INFO     | preparing for final server update for job 7045651698 in state='finished'
[2026-03-14 06:02:01] 2026-03-14 10:01:11,339 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045651698/jobReport.json
[2026-03-14 06:02:01] 2026-03-14 10:01:11,342 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 06:02:01] 2026-03-14 10:01:11,342 | INFO     | this job has now completed (state=finished)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,343 | INFO     | log transfer has been attempted: DONE
[2026-03-14 06:02:01] 2026-03-14 10:01:11,343 | INFO     | job 7045651698 has finished - writing final server update
[2026-03-14 06:02:01] 2026-03-14 10:01:11,343 | INFO     | total number of processed events: 400 (read)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,346 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045651698/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,347 | INFO     | extracted standard info from prmon json
[2026-03-14 06:02:01] 2026-03-14 10:01:11,347 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 06:02:01] 2026-03-14 10:01:11,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 06:02:01] 2026-03-14 10:01:11,348 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 06:02:01] 2026-03-14 10:01:11,348 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 06:02:01] 2026-03-14 10:01:11,349 | INFO     | fitting pss+swap vs Time
[2026-03-14 06:02:01] 2026-03-14 10:01:11,349 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,349 | INFO     | sum of deviations: -4037679548.0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | mean x: 1773480528.0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | mean y: 2723066.3220338984
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | intersect: 112475804303.19348
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | chi2: 0.07216590697968141
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | current memory leak: -63.42 B/s (using 59 data points, chi2=0.07)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,350 | INFO     | could have reported an average CPU frequency of 1784 MHz (6 samples)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | ..............................
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . Timing measurements:
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . get job = 0 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . initial setup = 7 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . payload setup = 7 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . stage-in = 0 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . payload execution = 4012 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . stage-out = 0 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,351 | INFO     | . log creation = 0 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,352 | INFO     | ..............................
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | 
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | job summary report
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | --------------------------------------------------
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | PanDA job id: 7045651698
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | task id: 48955015
[2026-03-14 06:02:01] 2026-03-14 10:01:11,431 | INFO     | errors: (none)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | pilot state: finished 
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | transexitcode: 0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | exeerrorcode: 0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | exeerrordiag: 
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | exitcode: 0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,432 | INFO     | exitmsg: OK
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | cpuconsumptiontime: 43149 s
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | nevents: 400
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | neventsw: 0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | pid: 10302
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | pgrp: 10302
[2026-03-14 06:02:01] 2026-03-14 10:01:11,433 | INFO     | corecount: 12
[2026-03-14 06:02:01] 2026-03-14 10:01:11,434 | INFO     | event service: False
[2026-03-14 06:02:01] 2026-03-14 10:01:11,434 | INFO     | sizes: {0: 2280030, 1: 2280264, 11: 2280264, 4023: 2306122, 4024: 2315175, 4028: 2315175, 4031: 2315497}
[2026-03-14 06:02:01] 2026-03-14 10:01:11,434 | INFO     | --------------------------------------------------
[2026-03-14 06:02:01] 2026-03-14 10:01:11,434 | INFO     | 
[2026-03-14 06:02:01] 2026-03-14 10:01:11,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 06:02:01] 2026-03-14 10:01:11,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,463 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 06:02:01] 2026-03-14 10:01:11,463 | INFO     | job 7045651698 has completed (purged errors)
[2026-03-14 06:02:01] 2026-03-14 10:01:11,463 | INFO     | overall cleanup function is called
[2026-03-14 06:02:01] 2026-03-14 10:01:12,471 | INFO     | --- collectZombieJob: --- 10, [10302]
[2026-03-14 06:02:01] 2026-03-14 10:01:12,472 | INFO     | zombie collector waiting for pid 10302
[2026-03-14 06:02:01] 2026-03-14 10:01:12,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 06:02:01] 2026-03-14 10:01:12,472 | INFO     | collected zombie processes
[2026-03-14 06:02:01] 2026-03-14 10:01:12,472 | INFO     | will attempt to kill all subprocesses of pid=10302
[2026-03-14 06:02:01] 2026-03-14 10:01:12,563 | INFO     | process IDs to be killed: [10302] (in reverse order)
[2026-03-14 06:02:01] 2026-03-14 10:01:12,617 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 06:02:01] 2026-03-14 10:01:12,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 06:02:01] 2026-03-14 10:01:12,620 | INFO     | did not find any defunct processes belonging to 10302
[2026-03-14 06:02:01] 2026-03-14 10:01:12,622 | INFO     | did not find any defunct processes belonging to 10302
[2026-03-14 06:02:01] 2026-03-14 10:01:12,622 | INFO     | ready for new job
[2026-03-14 06:02:01] 2026-03-14 10:01:12,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 06:02:01] 2026-03-14 10:01:12,624 | INFO     | **************************************
[2026-03-14 06:02:01] 2026-03-14 10:01:12,624 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 06:02:01] 2026-03-14 10:01:12,624 | INFO     | **************************************
[2026-03-14 06:02:01] 2026-03-14 10:01:12,624 | INFO     | 
[2026-03-14 06:02:01] 2026-03-14 10:01:12,625 | INFO     | architecture information:
[2026-03-14 06:02:01] 2026-03-14 10:01:12,625 | INFO     | executing command: cat /etc/os-release
[2026-03-14 06:02:01] 2026-03-14 10:01:12,640 | INFO     | cat /etc/os-release:
[2026-03-14 06:02:01] NAME="CentOS Linux"
[2026-03-14 06:02:01] VERSION="7 (Core)"
[2026-03-14 06:02:01] ID="centos"
[2026-03-14 06:02:01] ID_LIKE="rhel fedora"
[2026-03-14 06:02:01] VERSION_ID="7"
[2026-03-14 06:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 06:02:01] ANSI_COLOR="0;31"
[2026-03-14 06:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 06:02:01] HOME_URL="https://www.centos.org/"
[2026-03-14 06:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 06:02:01] 
[2026-03-14 06:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 06:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 06:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 06:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 06:02:01] 
[2026-03-14 06:02:01] 2026-03-14 10:01:12,640 | INFO     | **************************************
[2026-03-14 06:02:01] 2026-03-14 10:01:13,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 06:02:01] 2026-03-14 10:01:13,159 | INFO     | sufficient remaining disk space (28903997440 B)
[2026-03-14 06:02:01] 2026-03-14 10:01:13,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 06:02:01] 2026-03-14 10:01:13,160 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 06:02:01] 2026-03-14 10:01:13,160 | INFO     | update_server=False
[2026-03-14 06:02:01] 2026-03-14 10:01:13,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 06:02:01] 2026-03-14 10:01:13,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:02:01] 2026-03-14 10:01:13,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 06:02:01] 2026-03-14 10:01:13,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 06:02:01] 2026-03-14 10:01:13,380 | INFO     | aborting loop
[2026-03-14 06:02:01] 2026-03-14 10:01:13,680 | INFO     | all job control threads have been joined
[2026-03-14 06:02:01] 2026-03-14 10:01:13,990 | INFO     | all data control threads have been joined
[2026-03-14 06:02:01] 2026-03-14 10:01:14,166 | INFO     | [job] retrieve thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,166 | INFO     | [job] queue monitor thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,334 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,386 | INFO     | [job] job monitor thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,391 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,484 | INFO     | [data] copytool_in thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,554 | INFO     | [payload] failed_post thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 06:02:01] 2026-03-14 10:01:14,653 | INFO     | all payload control threads have been joined
[2026-03-14 06:02:01] 2026-03-14 10:01:14,685 | INFO     | [job] control thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:14,995 | INFO     | [data] control thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:15,132 | INFO     | [payload] validate_post thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:15,364 | INFO     | [data] copytool_out thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:15,388 | INFO     | [job] validate thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:15,509 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:15,658 | INFO     | [payload] control thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:18,652 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:23,846 | INFO     | job.realtimelogging is not enabled
[2026-03-14 06:02:01] 2026-03-14 10:01:24,851 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 06:02:01] 2026-03-14 10:01:43,821 | INFO     | PID=5839 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 06:02:01] 2026-03-14 10:01:43,821 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 06:02:01] 2026-03-14 10:01:43,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 06:02:01] 2026-03-14 10:01:43,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 06:02:01] 2026-03-14 10:01:55,610 | INFO     | [monitor] cgroup control has ended
[2026-03-14 06:02:01] 2026-03-14 10:01:55,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137061226304)>', '<ExcThread(monitor, started 140136159360768)>']
[2026-03-14 06:02:01] 2026-03-14 10:01:55,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 06:02:01] 2026-03-14 10:01:55,881 | INFO     | [monitor] control thread has ended
[2026-03-14 06:02:01] 2026-03-14 10:02:00,734 | INFO     | all workflow threads have been joined
[2026-03-14 06:02:01] 2026-03-14 10:02:00,734 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 06:02:01] 2026-03-14 10:02:00,734 | INFO     | traces error code: 0
[2026-03-14 06:02:01] 2026-03-14 10:02:00,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 06:02:01] 2026-03-14 10:02:00,818 [wrapper] ==== pilot stdout END ====
[2026-03-14 06:02:01] 2026-03-14 10:02:00,822 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 06:02:01] 2026-03-14 10:02:00,826 [wrapper] pilotpid: 5839
[2026-03-14 06:02:01] 2026-03-14 10:02:00,830 [wrapper] Pilot exit status: 0
[2026-03-14 06:02:01] 2026-03-14 10:02:00,845 [wrapper] pandaids: 7045651698
[2026-03-14 06:02:01] 2026-03-14 10:02:00,891 [wrapper] cleanup supervisor_pilot 28802 5840
[2026-03-14 06:02:01] 2026-03-14 10:02:00,896 [wrapper] Test setup, not cleaning
[2026-03-14 06:02:01] 2026-03-14 10:02:00,899 [wrapper] apfmon messages muted
[2026-03-14 06:02:01] 2026-03-14 10:02:00,903 [wrapper] ==== wrapper stdout END ====
[2026-03-14 06:02:01] 2026-03-14 10:02:00,907 [wrapper] ==== wrapper stderr END ====
[2026-03-14 06:02:01]  *** Error codes and diagnostics ***
[2026-03-14 06:02:01]     "exeErrorCode": 0,
[2026-03-14 06:02:01]     "exeErrorDiag": "",
[2026-03-14 06:02:01]     "pilotErrorCode": 0,
[2026-03-14 06:02:01]     "pilotErrorDiag": "",
[2026-03-14 06:02:01]  *** Listing of results directory ***
[2026-03-14 06:02:01] total 615564
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 23:09 pilot3.tar.gz
[2026-03-14 06:02:01] -rwx------ 1 boincer umatlas     36322 Mar 13 23:09 runpilot2-wrapper.sh
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 23:10 queuedata.json
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas       100 Mar 14 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 06:02:01] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 04:53 run_atlas
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas       105 Mar 14 04:53 job.xml
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas 439296441 Mar 14 04:53 EVNT.46701403._002511.pool.root.1
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 04:53 start_atlas.sh
[2026-03-14 06:02:01] drwxrwx--x 2 boincer umatlas      4096 Mar 14 04:53 shared
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 04:53 input.tar.gz
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas         0 Mar 14 04:53 boinc_lockfile
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas      2571 Mar 14 04:53 pandaJob.out
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas        57 Mar 14 04:53 setup.sh.local
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas   1004579 Mar 14 04:53 agis_schedconf.cvmfs.json
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas   1511579 Mar 14 04:53 agis_ddmendpoints.agis.ALL.json
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas       433 Mar 14 04:53 workernode_map.json
[2026-03-14 06:02:01] drwx------ 5 boincer umatlas      4096 Mar 14 04:53 pilot3
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 05:54 init_data.xml
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas 185132352 Mar 14 06:00 HITS.48955015._022670.pool.root.1
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas       530 Mar 14 06:00 boinc_task_state.xml
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas      1044 Mar 14 06:01 memory_monitor_summary.json
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas    387569 Mar 14 06:01 log.48955015._022670.job.log.tgz.1
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas      6408 Mar 14 06:01 heartbeat.json
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 06:01 boinc_mmap_file
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas        27 Mar 14 06:01 wrapper_checkpoint.txt
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas        95 Mar 14 06:01 pilot_heartbeat.json
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas      4813 Mar 14 06:02 pilotlog.txt
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas    595001 Mar 14 06:02 log.48955015._022670.job.log.1
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas       357 Mar 14 06:02 output.list
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas       620 Mar 14 06:02 runtime_log
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas   1003520 Mar 14 06:02 result.tar.gz
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 06:02 runtime_log.err
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas       659 Mar 14 06:02 8RHLDm8YUL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmO6oLDmS7bSkm.diag
[2026-03-14 06:02:01] -rw-r--r-- 1 boincer umatlas     21576 Mar 14 06:02 stderr.txt
[2026-03-14 06:02:01] HITS file was successfully produced:
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas 185132352 Mar 14 06:00 shared/HITS.pool.root.1
[2026-03-14 06:02:01]  *** Contents of shared directory: ***
[2026-03-14 06:02:01] total 611384
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas 439296441 Mar 14 04:53 ATLAS.root_0
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 04:53 start_atlas.sh
[2026-03-14 06:02:01] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 04:53 input.tar.gz
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas 185132352 Mar 14 06:00 HITS.pool.root.1
[2026-03-14 06:02:01] -rw------- 1 boincer umatlas   1003520 Mar 14 06:02 result.tar.gz
06:02:02 (2082): run_atlas exited; CPU time 43134.393571
06:02:02 (2082): called boinc_finish(0)

</stderr_txt>
]]>

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