Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:15:18 (3815787): wrapper (7.7.26015): starting
07:15:18 (3815787): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 07:15:18] Arguments: --nthreads 4
[2026-03-14 07:15:18] Threads: 4
[2026-03-14 07:15:18] Checking for CVMFS
[2026-03-14 07:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 07:15:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 07:15:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 07:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 07:15:18] 2.13.3.0 356560 23011 95056 157268 3 9 4090769 4097024 0 130560 0 7922671 99.978 997142 30614 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-03-14 07:15:18] CVMFS is ok
[2026-03-14 07:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 07:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 07:15:18] Further information can be found at the LHC@home message board.
[2026-03-14 07:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 07:15:18] Checking for apptainer binary...
[2026-03-14 07:15:18] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-03-14 07:15:18] apptainer is not installed, using version from CVMFS
[2026-03-14 07:15:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 07:15:18] pckeatlas05
[2026-03-14 07:15:18] apptainer works
[2026-03-14 07:15:18] Set ATHENA_PROC_NUMBER=4
[2026-03-14 07:15:18] Set ATHENA_CORE_NUMBER=4
[2026-03-14 07:15:18] Starting ATLAS job with PandaID=7044843166
[2026-03-14 07:15:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 09:14:50]  *** The last 200 lines of the pilot log: ***
[2026-03-14 09:14:50] 2026-03-14 08:14:17,269 | INFO     | this job has now completed (state=finished)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,270 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,270 | INFO     | log transfer has been attempted: DONE
[2026-03-14 09:14:50] 2026-03-14 08:14:17,270 | INFO     | job 7044843166 has finished - writing final server update
[2026-03-14 09:14:50] 2026-03-14 08:14:17,270 | INFO     | total number of processed events: 400 (read)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,270 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7044843166/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,271 | INFO     | extracted standard info from prmon json
[2026-03-14 09:14:50] 2026-03-14 08:14:17,271 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 09:14:50] 2026-03-14 08:14:17,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 09:14:50] 2026-03-14 08:14:17,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 09:14:50] 2026-03-14 08:14:17,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 09:14:50] 2026-03-14 08:14:17,272 | INFO     | fitting pss+swap vs Time
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | sum of square deviations: 496597218.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | sum of deviations: -29142087662.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | mean x: 1773472481.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | mean y: 2526430.9487179485
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | intersect: 104076187406.3242
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | chi2: 1.3151621046966242
[2026-03-14 09:14:50] 2026-03-14 08:14:17,273 | INFO     | sum of square deviations: 435610028.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | sum of deviations: -26558110185.499996
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | mean x: 1773472328.5
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | mean y: 2532896.223214286
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | intersect: 108126934273.03966
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | chi2: 1.30739766138019
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | current chi2=1.30739766138019 (change=0.5903791850986445 %)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | right removable region: 111
[2026-03-14 09:14:50] 2026-03-14 08:14:17,274 | INFO     | sum of square deviations: 435610028.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | sum of deviations: -37895415825.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | mean x: 1773472633.5
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | mean y: 2547409.625
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | intersect: 154283850825.21194
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | chi2: 0.21060254575402185
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | current chi2=0.21060254575402185 (change=83.98657131300155 %)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | sum of square deviations: 379832238.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | sum of deviations: -34139621364.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | mean x: 1773472786.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,275 | INFO     | mean y: 2537124.7570093456
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | intersect: 159403670983.7482
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | chi2: 0.20794028282120608
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | current chi2=0.20794028282120608 (change=1.2641171659554484 %)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | left removable region: 20
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | sum of square deviations: 233641590.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | sum of deviations: -23807520236.999996
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | mean x: 1773472908.0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | mean y: 2520348.263736264
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | intersect: 180715175774.81357
[2026-03-14 09:14:50] 2026-03-14 08:14:17,276 | INFO     | chi2: 0.18798981022448524
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | current memory leak: -101.90 B/s (using 91 data points, chi2=0.19)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | could have reported an average CPU frequency of 3785 MHz (7 samples)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | ..............................
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . Timing measurements:
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . get job = 0 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . initial setup = 2 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . payload setup = 3 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . stage-in = 0 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . payload execution = 7110 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . stage-out = 0 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | . log creation = 0 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,277 | INFO     | ..............................
[2026-03-14 09:14:50] 2026-03-14 08:14:17,302 | INFO     | time since job start (7131s) is within the limit (345600.0s)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,818 | INFO     | 
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | job summary report
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | --------------------------------------------------
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | PanDA job id: 7044843166
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | task id: 48955015
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | errors: (none)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | pilot state: finished 
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | transexitcode: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | exeerrorcode: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | exeerrordiag: 
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | exitcode: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | exitmsg: OK
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | cpuconsumptiontime: 27579 s
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | nevents: 400
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | neventsw: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | pid: 3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:17,819 | INFO     | pgrp: 3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | corecount: 4
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | event service: False
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | sizes: {0: 2280236, 11: 2280236, 7117: 2316647, 7118: 2316647, 7120: 2316841}
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | --------------------------------------------------
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | 
[2026-03-14 09:14:50] 2026-03-14 08:14:17,820 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-14 09:14:50] 2026-03-14 08:14:17,829 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,829 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,831 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 09:14:50] 2026-03-14 08:14:17,831 | INFO     | job 7044843166 has completed (purged errors)
[2026-03-14 09:14:50] 2026-03-14 08:14:17,831 | INFO     | overall cleanup function is called
[2026-03-14 09:14:50] 2026-03-14 08:14:18,837 | INFO     | --- collectZombieJob: --- 10, [3824932]
[2026-03-14 09:14:50] 2026-03-14 08:14:18,837 | INFO     | zombie collector waiting for pid 3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:18,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 09:14:50] 2026-03-14 08:14:18,837 | INFO     | collected zombie processes
[2026-03-14 09:14:50] 2026-03-14 08:14:18,837 | INFO     | will attempt to kill all subprocesses of pid=3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:18,876 | INFO     | process IDs to be killed: [3824932] (in reverse order)
[2026-03-14 09:14:50] 2026-03-14 08:14:18,894 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 09:14:50] 2026-03-14 08:14:18,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 09:14:50] 2026-03-14 08:14:18,896 | INFO     | did not find any defunct processes belonging to 3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:18,897 | INFO     | did not find any defunct processes belonging to 3824932
[2026-03-14 09:14:50] 2026-03-14 08:14:18,897 | INFO     | ready for new job
[2026-03-14 09:14:50] 2026-03-14 08:14:18,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 09:14:50] 2026-03-14 08:14:18,898 | INFO     | **************************************
[2026-03-14 09:14:50] 2026-03-14 08:14:18,898 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 09:14:50] 2026-03-14 08:14:18,898 | INFO     | **************************************
[2026-03-14 09:14:50] 2026-03-14 08:14:18,898 | INFO     | 
[2026-03-14 09:14:50] 2026-03-14 08:14:18,898 | INFO     | architecture information:
[2026-03-14 09:14:50] 2026-03-14 08:14:18,899 | INFO     | executing command: cat /etc/os-release
[2026-03-14 09:14:50] 2026-03-14 08:14:18,904 | INFO     | cat /etc/os-release:
[2026-03-14 09:14:50] NAME="CentOS Linux"
[2026-03-14 09:14:50] VERSION="7 (Core)"
[2026-03-14 09:14:50] ID="centos"
[2026-03-14 09:14:50] ID_LIKE="rhel fedora"
[2026-03-14 09:14:50] VERSION_ID="7"
[2026-03-14 09:14:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 09:14:50] ANSI_COLOR="0;31"
[2026-03-14 09:14:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 09:14:50] HOME_URL="https://www.centos.org/"
[2026-03-14 09:14:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 09:14:50] 
[2026-03-14 09:14:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 09:14:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 09:14:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 09:14:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 09:14:50] 
[2026-03-14 09:14:50] 2026-03-14 08:14:18,904 | INFO     | **************************************
[2026-03-14 09:14:50] 2026-03-14 08:14:19,169 | WARNING  | process 3824932 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 09:14:50] 2026-03-14 08:14:19,201 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 09:14:50] 2026-03-14 08:14:19,240 | INFO     | number of running child processes to parent process 3824932: 1
[2026-03-14 09:14:50] 2026-03-14 08:14:19,240 | INFO     | maximum number of monitored processes: 6
[2026-03-14 09:14:50] 2026-03-14 08:14:19,240 | INFO     | aborting job monitoring since job object (job id=7044843166) has expired
[2026-03-14 09:14:50] 2026-03-14 08:14:19,406 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-14 09:14:50] 2026-03-14 08:14:19,413 | INFO     | sufficient remaining disk space (43678433280 B)
[2026-03-14 09:14:50] 2026-03-14 08:14:19,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 09:14:50] 2026-03-14 08:14:19,413 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 09:14:50] 2026-03-14 08:14:19,413 | INFO     | update_server=False
[2026-03-14 09:14:50] 2026-03-14 08:14:19,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 09:14:50] 2026-03-14 08:14:19,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:14:50] 2026-03-14 08:14:19,414 | INFO     | will abort loop
[2026-03-14 09:14:50] 2026-03-14 08:14:19,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 09:14:50] 2026-03-14 08:14:20,306 | INFO     | all data control threads have been joined
[2026-03-14 09:14:50] 2026-03-14 08:14:20,412 | INFO     | all payload control threads have been joined
[2026-03-14 09:14:50] 2026-03-14 08:14:20,419 | INFO     | [job] retrieve thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,419 | INFO     | [job] job monitor thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,514 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,676 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,780 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,813 | INFO     | [data] copytool_in thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:20,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 09:14:50] 2026-03-14 08:14:21,077 | INFO     | all job control threads have been joined
[2026-03-14 09:14:50] 2026-03-14 08:14:21,221 | INFO     | [payload] validate_post thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:21,311 | INFO     | [data] control thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:21,417 | INFO     | [payload] control thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:21,636 | INFO     | [payload] failed_post thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:21,749 | INFO     | [data] copytool_out thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:21,838 | INFO     | [job] validate thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:22,082 | INFO     | [job] control thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:22,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 09:14:50] 2026-03-14 08:14:23,339 | INFO     | [job] queue monitor thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:24,929 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:30,406 | INFO     | job.realtimelogging is not enabled
[2026-03-14 09:14:50] 2026-03-14 08:14:31,411 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 09:14:50] 2026-03-14 08:14:37,163 | INFO     | [monitor] cgroup control has ended
[2026-03-14 09:14:50] 2026-03-14 08:14:38,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896966731584)>', '<ExcThread(monitor, started 139896471676672)>']
[2026-03-14 09:14:50] 2026-03-14 08:14:43,452 | INFO     | all workflow threads have been joined
[2026-03-14 09:14:50] 2026-03-14 08:14:43,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 09:14:50] 2026-03-14 08:14:43,452 | INFO     | traces error code: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:43,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 09:14:50] 2026-03-14 08:14:50,427 | INFO     | PID=3819802 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 09:14:50] 2026-03-14 08:14:50,428 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 09:14:50] 2026-03-14 08:14:50,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 09:14:50] 2026-03-14 08:14:50,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 09:14:50] 2026-03-14 08:14:50,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 09:14:50] 2026-03-14 08:14:50,428 | INFO     | [monitor] control thread has ended
[2026-03-14 09:14:50] 2026-03-14 08:14:50,483 [wrapper] ==== pilot stdout END ====
[2026-03-14 09:14:50] 2026-03-14 08:14:50,485 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 09:14:50] 2026-03-14 08:14:50,486 [wrapper] pilotpid: 3819802
[2026-03-14 09:14:50] 2026-03-14 08:14:50,487 [wrapper] Pilot exit status: 0
[2026-03-14 09:14:50] 2026-03-14 08:14:50,491 [wrapper] pandaids: 7044843166
[2026-03-14 09:14:50] 2026-03-14 08:14:50,501 [wrapper] cleanup supervisor_pilot 3836127 3819803
[2026-03-14 09:14:50] 2026-03-14 08:14:50,502 [wrapper] Test setup, not cleaning
[2026-03-14 09:14:50] 2026-03-14 08:14:50,503 [wrapper] apfmon messages muted
[2026-03-14 09:14:50] 2026-03-14 08:14:50,504 [wrapper] ==== wrapper stdout END ====
[2026-03-14 09:14:50] 2026-03-14 08:14:50,505 [wrapper] ==== wrapper stderr END ====
[2026-03-14 09:14:50]  *** Error codes and diagnostics ***
[2026-03-14 09:14:50]     "exeErrorCode": 0,
[2026-03-14 09:14:50]     "exeErrorDiag": "",
[2026-03-14 09:14:50]     "pilotErrorCode": 0,
[2026-03-14 09:14:50]     "pilotErrorDiag": "",
[2026-03-14 09:14:50]  *** Listing of results directory ***
[2026-03-14 09:14:50] total 611220
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc    585013 Mar 13 19:59 pilot3.tar.gz
[2026-03-14 09:14:50] -rwx------ 1 boinc boinc     36322 Mar 13 20:00 runpilot2-wrapper.sh
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc      5111 Mar 13 20:00 queuedata.json
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc       100 Mar 14 07:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 09:14:50] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 07:15 run_atlas
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc       105 Mar 14 07:15 job.xml
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc     15845 Mar 14 07:15 start_atlas.sh
[2026-03-14 09:14:50] drwxrwx--x 2 boinc boinc        68 Mar 14 07:15 shared
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc    597528 Mar 14 07:15 input.tar.gz
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc      6313 Mar 14 07:15 init_data.xml
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc 437688724 Mar 14 07:15 EVNT.46701403._002436.pool.root.1
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc         0 Mar 14 07:15 boinc_lockfile
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc      2571 Mar 14 07:15 pandaJob.out
[2026-03-14 09:14:50] -rw------- 1 boinc boinc   1004579 Mar 14 07:15 agis_schedconf.cvmfs.json
[2026-03-14 09:14:50] -rw------- 1 boinc boinc   1511579 Mar 14 07:15 agis_ddmendpoints.agis.ALL.json
[2026-03-14 09:14:50] -rw------- 1 boinc boinc       421 Mar 14 07:15 workernode_map.json
[2026-03-14 09:14:50] drwx------ 5 boinc boinc      4096 Mar 14 07:15 pilot3
[2026-03-14 09:14:50] -rw------- 1 boinc boinc 181653081 Mar 14 09:13 HITS.48955015._019013.pool.root.1
[2026-03-14 09:14:50] -rw------- 1 boinc boinc        95 Mar 14 09:14 pilot_heartbeat.json
[2026-03-14 09:14:50] -rw------- 1 boinc boinc      1014 Mar 14 09:14 memory_monitor_summary.json
[2026-03-14 09:14:50] -rw------- 1 boinc boinc    287497 Mar 14 09:14 log.48955015._019013.job.log.tgz.1
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc       530 Mar 14 09:14 boinc_task_state.xml
[2026-03-14 09:14:50] -rw------- 1 boinc boinc      6312 Mar 14 09:14 heartbeat.json
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc      8192 Mar 14 09:14 boinc_mmap_file
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc        27 Mar 14 09:14 wrapper_checkpoint.txt
[2026-03-14 09:14:50] -rw------- 1 boinc boinc       747 Mar 14 09:14 pilotlog.txt
[2026-03-14 09:14:50] -rw------- 1 boinc boinc   1024492 Mar 14 09:14 log.48955015._019013.job.log.1
[2026-03-14 09:14:50] -rw------- 1 boinc boinc       357 Mar 14 09:14 output.list
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc       620 Mar 14 09:14 runtime_log
[2026-03-14 09:14:50] -rw------- 1 boinc boinc   1331200 Mar 14 09:14 result.tar.gz
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc      8829 Mar 14 09:14 runtime_log.err
[2026-03-14 09:14:50] -rw------- 1 boinc boinc       650 Mar 14 09:14 jCvKDmfvML9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxVqLDm6OuZGn.diag
[2026-03-14 09:14:50] -rw-r--r-- 1 boinc boinc     21308 Mar 14 09:14 stderr.txt
[2026-03-14 09:14:50] HITS file was successfully produced:
[2026-03-14 09:14:50] -rw------- 1 boinc boinc 181653081 Mar 14 09:13 shared/HITS.pool.root.1
[2026-03-14 09:14:50]  *** Contents of shared directory: ***
[2026-03-14 09:14:50] total 606728
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc     15845 Mar 14 07:15 start_atlas.sh
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc    597528 Mar 14 07:15 input.tar.gz
[2026-03-14 09:14:50] -rw-r--r-- 2 boinc boinc 437688724 Mar 14 07:15 ATLAS.root_0
[2026-03-14 09:14:50] -rw------- 1 boinc boinc 181653081 Mar 14 09:13 HITS.pool.root.1
[2026-03-14 09:14:50] -rw------- 1 boinc boinc   1331200 Mar 14 09:14 result.tar.gz
09:14:52 (3815787): run_atlas exited; CPU time 27625.896665
09:14:52 (3815787): called boinc_finish(0)

</stderr_txt>
]]>

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