Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:01 (7537): wrapper (7.7.26015): starting
22:54:01 (7537): wrapper: running run_atlas (--nthreads 12)
[2026-03-13 22:54:01] Arguments: --nthreads 12
[2026-03-13 22:54:01] Threads: 12
[2026-03-13 22:54:01] Checking for CVMFS
[2026-03-13 22:54:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 22:54:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 22:54:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 22:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 22:54:01] 2.11.2.0 2933 442628 95188 157261 3 52 18206604 20275200 1 130560 2 191118096 99.946 26335035 17534 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-13 22:54:01] CVMFS is ok
[2026-03-13 22:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 22:54:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 22:54:01] Further information can be found at the LHC@home message board.
[2026-03-13 22:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 22:54:01] Checking for apptainer binary...
[2026-03-13 22:54:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 22:54:01] Running /usr/bin/apptainer --version
[2026-03-13 22:54:02] apptainer version 1.3.2-1.el7
[2026-03-13 22:54:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 22:54:03] c-205-15.aglt2.org
[2026-03-13 22:54:03] apptainer works
[2026-03-13 22:54:03] Set ATHENA_PROC_NUMBER=12
[2026-03-13 22:54:03] Set ATHENA_CORE_NUMBER=12
[2026-03-13 22:54:03] Starting ATLAS job with PandaID=7045204204
[2026-03-13 22:54:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 00:01:36]  *** The last 200 lines of the pilot log: ***
[2026-03-14 00:01:36]  scope=mc23_13p6TeV
[2026-03-14 00:01:36]  status=None
[2026-03-14 00:01:36]  status_code=0
[2026-03-14 00:01:36]  storage_token=
[2026-03-14 00:01:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045204204/log.48955015._021322.job.log.tgz.1
[2026-03-14 00:01:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/d4/log.48955015._021322.job.log.tgz.1
[2026-03-14 00:01:36]  workdir=None
[2026-03-14 00:01:36] ]
[2026-03-14 00:01:36] 2026-03-14 04:01:14,257 | INFO     | transferring file log.48955015._021322.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045204204/log.48955015._021322.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 00:01:36] 2026-03-14 04:01:14,258 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045204204/log.48955015._021322.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._021322.job
[2026-03-14 00:01:36] 2026-03-14 04:01:14,279 | INFO     | adding to output.list: log.48955015._021322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/d4/log.48955015._021322.job.log.tg
[2026-03-14 00:01:36] 2026-03-14 04:01:14,280 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 00:01:36] 2026-03-14 04:01:14,280 | INFO     | summary of transferred files:
[2026-03-14 00:01:36] 2026-03-14 04:01:14,280 | INFO     |  -- lfn=log.48955015._021322.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 00:01:36] 2026-03-14 04:01:14,281 | INFO     | stage-out finished correctly
[2026-03-14 00:01:36] 2026-03-14 04:01:14,502 | INFO     | time since job start (4011s) is within the limit (345600.0s)
[2026-03-14 00:01:36] 2026-03-14 04:01:15,031 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 00:01:36] 2026-03-14 04:01:16,508 | INFO     | time since job start (4013s) is within the limit (345600.0s)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,653 | INFO     | job 7045204204 has state=finished
[2026-03-14 00:01:36] 2026-03-14 04:01:16,653 | INFO     | preparing for final server update for job 7045204204 in state='finished'
[2026-03-14 00:01:36] 2026-03-14 04:01:16,653 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045204204/jobReport.json
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | this job has now completed (state=finished)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | log transfer has been attempted: DONE
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | job 7045204204 has finished - writing final server update
[2026-03-14 00:01:36] 2026-03-14 04:01:16,656 | INFO     | total number of processed events: 400 (read)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,658 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045204204/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,659 | INFO     | extracted standard info from prmon json
[2026-03-14 00:01:36] 2026-03-14 04:01:16,659 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 00:01:36] 2026-03-14 04:01:16,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 00:01:36] 2026-03-14 04:01:16,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 00:01:36] 2026-03-14 04:01:16,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | fitting pss+swap vs Time
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | sum of square deviations: 63666310.0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | sum of deviations: -1827686880.0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | mean x: 1773458961.0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | mean y: 2689723.440677966
[2026-03-14 00:01:36] 2026-03-14 04:01:16,661 | INFO     | intersect: 50913880826.523796
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | chi2: 0.03769209334008096
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | current memory leak: -28.71 B/s (using 59 data points, chi2=0.04)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | could have reported an average CPU frequency of 1718 MHz (6 samples)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | ..............................
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | . Timing measurements:
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | . get job = 0 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,662 | INFO     | . initial setup = 7 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | . payload setup = 7 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | . stage-in = 0 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | . payload execution = 3988 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | . stage-out = 0 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | . log creation = 0 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,663 | INFO     | ..............................
[2026-03-14 00:01:36] 2026-03-14 04:01:16,742 | INFO     | 
[2026-03-14 00:01:36] 2026-03-14 04:01:16,742 | INFO     | job summary report
[2026-03-14 00:01:36] 2026-03-14 04:01:16,742 | INFO     | --------------------------------------------------
[2026-03-14 00:01:36] 2026-03-14 04:01:16,742 | INFO     | PanDA job id: 7045204204
[2026-03-14 00:01:36] 2026-03-14 04:01:16,742 | INFO     | task id: 48955015
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | errors: (none)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | pilot state: finished 
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | transexitcode: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | exeerrorcode: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | exeerrordiag: 
[2026-03-14 00:01:36] 2026-03-14 04:01:16,743 | INFO     | exitcode: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | exitmsg: OK
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | cpuconsumptiontime: 43217 s
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | nevents: 400
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | neventsw: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | pid: 15664
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | pgrp: 15664
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | corecount: 12
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | event service: False
[2026-03-14 00:01:36] 2026-03-14 04:01:16,744 | INFO     | sizes: {0: 2280238, 11: 2280238, 3999: 2315094, 4000: 2315094, 4002: 2315288}
[2026-03-14 00:01:36] 2026-03-14 04:01:16,745 | INFO     | --------------------------------------------------
[2026-03-14 00:01:36] 2026-03-14 04:01:16,745 | INFO     | 
[2026-03-14 00:01:36] 2026-03-14 04:01:16,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 00:01:36] 2026-03-14 04:01:16,768 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,769 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,769 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,769 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,771 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,772 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 00:01:36] 2026-03-14 04:01:16,772 | INFO     | job 7045204204 has completed (purged errors)
[2026-03-14 00:01:36] 2026-03-14 04:01:16,772 | INFO     | overall cleanup function is called
[2026-03-14 00:01:36] 2026-03-14 04:01:17,624 | INFO     | PID=11272 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 00:01:36] 2026-03-14 04:01:17,781 | INFO     | --- collectZombieJob: --- 10, [15664]
[2026-03-14 00:01:36] 2026-03-14 04:01:17,781 | INFO     | zombie collector waiting for pid 15664
[2026-03-14 00:01:36] 2026-03-14 04:01:17,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 00:01:36] 2026-03-14 04:01:17,781 | INFO     | collected zombie processes
[2026-03-14 00:01:36] 2026-03-14 04:01:17,781 | INFO     | will attempt to kill all subprocesses of pid=15664
[2026-03-14 00:01:36] 2026-03-14 04:01:17,870 | INFO     | process IDs to be killed: [15664] (in reverse order)
[2026-03-14 00:01:36] 2026-03-14 04:01:17,923 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 00:01:36] 2026-03-14 04:01:17,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 00:01:36] 2026-03-14 04:01:17,926 | INFO     | did not find any defunct processes belonging to 15664
[2026-03-14 00:01:36] 2026-03-14 04:01:17,928 | INFO     | did not find any defunct processes belonging to 15664
[2026-03-14 00:01:36] 2026-03-14 04:01:17,928 | INFO     | ready for new job
[2026-03-14 00:01:36] 2026-03-14 04:01:17,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 00:01:36] 2026-03-14 04:01:17,930 | INFO     | **************************************
[2026-03-14 00:01:36] 2026-03-14 04:01:17,930 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 00:01:36] 2026-03-14 04:01:17,930 | INFO     | **************************************
[2026-03-14 00:01:36] 2026-03-14 04:01:17,930 | INFO     | 
[2026-03-14 00:01:36] 2026-03-14 04:01:17,930 | INFO     | architecture information:
[2026-03-14 00:01:36] 2026-03-14 04:01:17,931 | INFO     | executing command: cat /etc/os-release
[2026-03-14 00:01:36] 2026-03-14 04:01:17,946 | INFO     | cat /etc/os-release:
[2026-03-14 00:01:36] NAME="CentOS Linux"
[2026-03-14 00:01:36] VERSION="7 (Core)"
[2026-03-14 00:01:36] ID="centos"
[2026-03-14 00:01:36] ID_LIKE="rhel fedora"
[2026-03-14 00:01:36] VERSION_ID="7"
[2026-03-14 00:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 00:01:36] ANSI_COLOR="0;31"
[2026-03-14 00:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 00:01:36] HOME_URL="https://www.centos.org/"
[2026-03-14 00:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 00:01:36] 
[2026-03-14 00:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 00:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 00:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 00:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 00:01:36] 
[2026-03-14 00:01:36] 2026-03-14 04:01:17,946 | INFO     | **************************************
[2026-03-14 00:01:36] 2026-03-14 04:01:18,316 | WARNING  | process 15664 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 00:01:36] 2026-03-14 04:01:18,390 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,390 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,391 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 00:01:36] 2026-03-14 04:01:18,391 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 00:01:36] 2026-03-14 04:01:18,391 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7045204204/payload.stdout) since it has not been created yet
[2026-03-14 00:01:36] 2026-03-14 04:01:18,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 00:01:36] 2026-03-14 04:01:18,408 | INFO     | sufficient remaining disk space (28907143168 B)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,408 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 00:01:36] 2026-03-14 04:01:18,409 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7045204204/HITS.48955015._021322.pool.root.1 since it does not exist
[2026-03-14 00:01:36] 2026-03-14 04:01:18,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 00:01:36] 2026-03-14 04:01:18,468 | INFO     | sufficient remaining disk space (28907143168 B)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 00:01:36] 2026-03-14 04:01:18,469 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 00:01:36] 2026-03-14 04:01:18,469 | INFO     | update_server=False
[2026-03-14 00:01:36] 2026-03-14 04:01:18,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 00:01:36] 2026-03-14 04:01:18,470 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 00:01:36] 2026-03-14 04:01:18,471 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 00:01:36] 2026-03-14 04:01:18,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 00:01:36] 2026-03-14 04:01:18,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 00:01:36] 2026-03-14 04:01:18,493 | INFO     | all data control threads have been joined
[2026-03-14 00:01:36] 2026-03-14 04:01:18,510 | INFO     | number of running child processes to parent process 15664: 1
[2026-03-14 00:01:36] 2026-03-14 04:01:18,510 | INFO     | maximum number of monitored processes: 6
[2026-03-14 00:01:36] 2026-03-14 04:01:18,510 | INFO     | aborting job monitoring since job object (job id=7045204204) has expired
[2026-03-14 00:01:36] 2026-03-14 04:01:18,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 00:01:36] 2026-03-14 04:01:18,510 | INFO     | will abort loop
[2026-03-14 00:01:36] 2026-03-14 04:01:19,345 | INFO     | all payload control threads have been joined
[2026-03-14 00:01:36] 2026-03-14 04:01:19,475 | INFO     | [job] retrieve thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,475 | INFO     | [job] queue monitor thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,485 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,499 | INFO     | [data] control thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,516 | INFO     | [job] job monitor thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,698 | INFO     | [payload] failed_post thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,770 | INFO     | [data] copytool_in thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:19,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 00:01:36] 2026-03-14 04:01:20,029 | INFO     | all job control threads have been joined
[2026-03-14 00:01:36] 2026-03-14 04:01:20,326 | INFO     | [job] validate thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:20,351 | INFO     | [payload] control thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:20,436 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:20,521 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:20,568 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:20,928 | INFO     | [payload] validate_post thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:21,034 | INFO     | [job] control thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:21,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 00:01:36] 2026-03-14 04:01:21,877 | INFO     | [data] copytool_out thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:25,119 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 00:01:36] 2026-03-14 04:01:29,393 | INFO     | [monitor] cgroup control has ended
[2026-03-14 00:01:36] 2026-03-14 04:01:30,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462105147200)>', '<ExcThread(monitor, started 140461486348032)>']
[2026-03-14 00:01:36] 2026-03-14 04:01:31,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 00:01:36] 2026-03-14 04:01:31,536 | INFO     | [monitor] control thread has ended
[2026-03-14 00:01:36] 2026-03-14 04:01:35,770 | INFO     | all workflow threads have been joined
[2026-03-14 00:01:36] 2026-03-14 04:01:35,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 00:01:36] 2026-03-14 04:01:35,778 | INFO     | traces error code: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:35,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 00:01:36] 2026-03-14 04:01:35,863 [wrapper] ==== pilot stdout END ====
[2026-03-14 00:01:36] 2026-03-14 04:01:35,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 00:01:36] 2026-03-14 04:01:35,870 [wrapper] pilotpid: 11272
[2026-03-14 00:01:36] 2026-03-14 04:01:35,874 [wrapper] Pilot exit status: 0
[2026-03-14 00:01:36] 2026-03-14 04:01:35,888 [wrapper] pandaids: 7045204204
[2026-03-14 00:01:36] 2026-03-14 04:01:35,925 [wrapper] cleanup supervisor_pilot  1852 11273
[2026-03-14 00:01:36] 2026-03-14 04:01:35,929 [wrapper] Test setup, not cleaning
[2026-03-14 00:01:36] 2026-03-14 04:01:35,933 [wrapper] apfmon messages muted
[2026-03-14 00:01:36] 2026-03-14 04:01:35,937 [wrapper] ==== wrapper stdout END ====
[2026-03-14 00:01:36] 2026-03-14 04:01:35,940 [wrapper] ==== wrapper stderr END ====
[2026-03-14 00:01:36]  *** Error codes and diagnostics ***
[2026-03-14 00:01:36]     "exeErrorCode": 0,
[2026-03-14 00:01:36]     "exeErrorDiag": "",
[2026-03-14 00:01:36]     "pilotErrorCode": 0,
[2026-03-14 00:01:36]     "pilotErrorDiag": "",
[2026-03-14 00:01:36]  *** Listing of results directory ***
[2026-03-14 00:01:36] total 613164
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 17:07 pilot3.tar.gz
[2026-03-14 00:01:36] -rwx------ 1 boincer umatlas     36322 Mar 13 17:11 runpilot2-wrapper.sh
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 17:12 queuedata.json
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas       100 Mar 13 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 00:01:36] -rwxr-xr-x 1 boincer umatlas      7986 Mar 13 22:53 run_atlas
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas       105 Mar 13 22:53 job.xml
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas 439254254 Mar 13 22:54 EVNT.46701403._002483.pool.root.1
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 22:54 start_atlas.sh
[2026-03-14 00:01:36] drwxrwx--x 2 boincer umatlas      4096 Mar 13 22:54 shared
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas    597527 Mar 13 22:54 input.tar.gz
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas         0 Mar 13 22:54 boinc_lockfile
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas      2572 Mar 13 22:54 pandaJob.out
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas        57 Mar 13 22:54 setup.sh.local
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas   1006013 Mar 13 22:54 agis_schedconf.cvmfs.json
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas   1511579 Mar 13 22:54 agis_ddmendpoints.agis.ALL.json
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas       433 Mar 13 22:54 workernode_map.json
[2026-03-14 00:01:36] drwx------ 5 boincer umatlas      4096 Mar 13 22:54 pilot3
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas 182673144 Mar 14 00:00 HITS.48955015._021322.pool.root.1
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas       531 Mar 14 00:00 boinc_task_state.xml
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 00:01 init_data.xml
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas      1045 Mar 14 00:01 memory_monitor_summary.json
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas        95 Mar 14 00:01 pilot_heartbeat.json
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 00:01 boinc_mmap_file
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas        27 Mar 14 00:01 wrapper_checkpoint.txt
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas    416545 Mar 14 00:01 log.48955015._021322.job.log.tgz.1
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas      6407 Mar 14 00:01 heartbeat.json
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas      6029 Mar 14 00:01 pilotlog.txt
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas    591261 Mar 14 00:01 log.48955015._021322.job.log.1
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas       357 Mar 14 00:01 output.list
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas       620 Mar 14 00:01 runtime_log
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas   1024000 Mar 14 00:01 result.tar.gz
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 00:01 runtime_log.err
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas       659 Mar 14 00:01 A4ILDm9xOL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmxqLDm6AtTBo.diag
[2026-03-14 00:01:36] -rw-r--r-- 1 boincer umatlas     22111 Mar 14 00:01 stderr.txt
[2026-03-14 00:01:36] HITS file was successfully produced:
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas 182673144 Mar 14 00:00 shared/HITS.pool.root.1
[2026-03-14 00:01:36]  *** Contents of shared directory: ***
[2026-03-14 00:01:36] total 608960
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas 439254254 Mar 13 22:54 ATLAS.root_0
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 13 22:54 start_atlas.sh
[2026-03-14 00:01:36] -rw-r--r-- 2 boincer umatlas    597527 Mar 13 22:54 input.tar.gz
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas 182673144 Mar 14 00:00 HITS.pool.root.1
[2026-03-14 00:01:36] -rw------- 1 boincer umatlas   1024000 Mar 14 00:01 result.tar.gz
00:01:37 (7537): run_atlas exited; CPU time 43187.255618
00:01:37 (7537): called boinc_finish(0)

</stderr_txt>
]]>

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