Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:49:15 (8649): wrapper (7.7.26015): starting
10:49:15 (8649): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 10:49:15] Arguments: --nthreads 8
[2026-03-14 10:49:15] Threads: 8
[2026-03-14 10:49:15] Checking for CVMFS
[2026-03-14 10:49:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:49:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:49:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:49:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:49:19] 2.11.2.0 12460 127415 108660 157272 2 54 19651273 25165824 4784 130560 154 40464459 99.815 27004452 929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 10:49:19] CVMFS is ok
[2026-03-14 10:49:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:49:20] Checking for apptainer binary...
[2026-03-14 10:49:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:49:20] Running /usr/bin/apptainer --version
[2026-03-14 10:49:20] apptainer version 1.3.2-1.el7
[2026-03-14 10:49:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:49:26] cg-vwn485.simple-grid.lan
[2026-03-14 10:49:26] apptainer works
[2026-03-14 10:49:26] Set ATHENA_PROC_NUMBER=8
[2026-03-14 10:49:26] Set ATHENA_CORE_NUMBER=8
[2026-03-14 10:49:26] Starting ATLAS job with PandaID=7045203493
[2026-03-14 10:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 14:33:48]  *** The last 200 lines of the pilot log: ***
[2026-03-14 14:33:48] 2026-03-14 13:33:01,408 | INFO     | job 7045203493 has finished - writing final server update
[2026-03-14 14:33:48] 2026-03-14 13:33:01,408 | INFO     | total number of processed events: 400 (read)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,410 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7045203493/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,411 | INFO     | extracted standard info from prmon json
[2026-03-14 14:33:48] 2026-03-14 13:33:01,411 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 14:33:48] 2026-03-14 13:33:01,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 14:33:48] 2026-03-14 13:33:01,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 14:33:48] 2026-03-14 13:33:01,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 14:33:48] 2026-03-14 13:33:01,416 | INFO     | fitting pss+swap vs Time
[2026-03-14 14:33:48] 2026-03-14 13:33:01,417 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,418 | INFO     | sum of deviations: 89348014122.99998
[2026-03-14 14:33:48] 2026-03-14 13:33:01,418 | INFO     | mean x: 1773488709.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,419 | INFO     | mean y: 2431662.255924171
[2026-03-14 14:33:48] 2026-03-14 13:33:01,419 | INFO     | intersect: -54397367596.85617
[2026-03-14 14:33:48] 2026-03-14 13:33:01,419 | INFO     | chi2: 5.653136319524678
[2026-03-14 14:33:48] 2026-03-14 13:33:01,420 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 14:33:48] 2026-03-14 13:33:01,421 | INFO     | sum of deviations: 86994414218.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | mean x: 1773488556.5
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | mean y: 2429888.708737864
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | intersect: -56915606342.04464
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | chi2: 5.663959358182525
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | current chi2=5.663959358182525 (change=-0.19145193121323784 %)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,422 | INFO     | right removable region: 205
[2026-03-14 14:33:48] 2026-03-14 13:33:01,423 | INFO     | sum of square deviations: 2710627567.5
[2026-03-14 14:33:48] 2026-03-14 13:33:01,428 | INFO     | sum of deviations: 17468200217.999996
[2026-03-14 14:33:48] 2026-03-14 13:33:01,428 | INFO     | mean x: 1773488861.5
[2026-03-14 14:33:48] 2026-03-14 13:33:01,428 | INFO     | mean y: 2485815.2621359224
[2026-03-14 14:33:48] 2026-03-14 13:33:01,428 | INFO     | intersect: -11426475834.990416
[2026-03-14 14:33:48] 2026-03-14 13:33:01,429 | INFO     | chi2: 0.9235335442877309
[2026-03-14 14:33:48] 2026-03-14 13:33:01,429 | INFO     | current chi2=0.9235335442877309 (change=83.66334204434357 %)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,429 | INFO     | sum of square deviations: 2518000700.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,431 | INFO     | sum of deviations: -8015100123.999999
[2026-03-14 14:33:48] 2026-03-14 13:33:01,431 | INFO     | mean x: 1773489014.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,431 | INFO     | mean y: 2505799.76119403
[2026-03-14 14:33:48] 2026-03-14 13:33:01,431 | INFO     | intersect: 5647735372.582217
[2026-03-14 14:33:48] 2026-03-14 13:33:01,432 | INFO     | chi2: 0.08237364098328849
[2026-03-14 14:33:48] 2026-03-14 13:33:01,432 | INFO     | current chi2=0.08237364098328849 (change=91.0806010791066 %)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,432 | INFO     | sum of square deviations: 2334722845.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,434 | INFO     | sum of deviations: -5546569905.500001
[2026-03-14 14:33:48] 2026-03-14 13:33:01,434 | INFO     | mean x: 1773489166.5
[2026-03-14 14:33:48] 2026-03-14 13:33:01,434 | INFO     | mean y: 2503701.6683673467
[2026-03-14 14:33:48] 2026-03-14 13:33:01,434 | INFO     | intersect: 4215758246.937179
[2026-03-14 14:33:48] 2026-03-14 13:33:01,435 | INFO     | chi2: 0.06484118067262529
[2026-03-14 14:33:48] 2026-03-14 13:33:01,435 | INFO     | current chi2=0.06484118067262529 (change=21.284066239369086 %)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,435 | INFO     | left removable region: 30
[2026-03-14 14:33:48] 2026-03-14 13:33:01,435 | INFO     | sum of square deviations: 1661798600.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,437 | INFO     | sum of deviations: 2209076204.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,437 | INFO     | mean x: 1773489441.0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,437 | INFO     | mean y: 2496497.017142857
[2026-03-14 14:33:48] 2026-03-14 13:33:01,437 | INFO     | intersect: -2355053522.6773987
[2026-03-14 14:33:48] 2026-03-14 13:33:01,437 | INFO     | chi2: 0.0005589557853526953
[2026-03-14 14:33:48] 2026-03-14 13:33:01,438 | INFO     | current memory leak: 1.33 B/s (using 175 data points, chi2=0.00)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,438 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,438 | INFO     | ..............................
[2026-03-14 14:33:48] 2026-03-14 13:33:01,438 | INFO     | . Timing measurements:
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . get job = 0 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . initial setup = 87 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . payload setup = 125 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . stage-in = 0 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . payload execution = 12973 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . stage-out = 3 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | . log creation = 1 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,439 | INFO     | ..............................
[2026-03-14 14:33:48] 2026-03-14 13:33:01,569 | INFO     | 
[2026-03-14 14:33:48] 2026-03-14 13:33:01,569 | INFO     | job summary report
[2026-03-14 14:33:48] 2026-03-14 13:33:01,569 | INFO     | --------------------------------------------------
[2026-03-14 14:33:48] 2026-03-14 13:33:01,569 | INFO     | PanDA job id: 7045203493
[2026-03-14 14:33:48] 2026-03-14 13:33:01,569 | INFO     | task id: 48955015
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | errors: (none)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | pilot state: finished 
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | transexitcode: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | exeerrorcode: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | exeerrordiag: 
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | exitcode: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | exitmsg: OK
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | cpuconsumptiontime: 49924 s
[2026-03-14 14:33:48] 2026-03-14 13:33:01,570 | INFO     | nevents: 400
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | neventsw: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | pid: 17307
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | pgrp: 17307
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | corecount: 8
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | event service: False
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | sizes: {0: 2279806, 1: 2280267, 12: 2280267, 13102: 2310314, 13103: 2310313, 13107: 2319369, 13110: 2319553, 13111: 2319747}
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | --------------------------------------------------
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | 
[2026-03-14 14:33:48] 2026-03-14 13:33:01,571 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-03-14 14:33:48] 2026-03-14 13:33:01,942 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,942 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,942 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | job 7045203493 has completed (purged errors)
[2026-03-14 14:33:48] 2026-03-14 13:33:01,944 | INFO     | overall cleanup function is called
[2026-03-14 14:33:48] 2026-03-14 13:33:02,953 | INFO     | --- collectZombieJob: --- 10, [17307]
[2026-03-14 14:33:48] 2026-03-14 13:33:02,954 | INFO     | zombie collector waiting for pid 17307
[2026-03-14 14:33:48] 2026-03-14 13:33:02,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 14:33:48] 2026-03-14 13:33:02,954 | INFO     | collected zombie processes
[2026-03-14 14:33:48] 2026-03-14 13:33:02,954 | INFO     | will attempt to kill all subprocesses of pid=17307
[2026-03-14 14:33:48] 2026-03-14 13:33:03,089 | INFO     | process IDs to be killed: [17307] (in reverse order)
[2026-03-14 14:33:48] 2026-03-14 13:33:03,876 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 14:33:48] 2026-03-14 13:33:03,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 14:33:48] 2026-03-14 13:33:03,879 | INFO     | did not find any defunct processes belonging to 17307
[2026-03-14 14:33:48] 2026-03-14 13:33:03,885 | INFO     | did not find any defunct processes belonging to 17307
[2026-03-14 14:33:48] 2026-03-14 13:33:03,886 | INFO     | ready for new job
[2026-03-14 14:33:48] 2026-03-14 13:33:03,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 14:33:48] 2026-03-14 13:33:03,888 | INFO     | **************************************
[2026-03-14 14:33:48] 2026-03-14 13:33:03,888 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 14:33:48] 2026-03-14 13:33:03,888 | INFO     | **************************************
[2026-03-14 14:33:48] 2026-03-14 13:33:03,888 | INFO     | 
[2026-03-14 14:33:48] 2026-03-14 13:33:03,894 | INFO     | pilot is running in a VM
[2026-03-14 14:33:48] 2026-03-14 13:33:03,894 | INFO     | architecture information:
[2026-03-14 14:33:48] 2026-03-14 13:33:03,899 | INFO     | executing command: cat /etc/os-release
[2026-03-14 14:33:48] 2026-03-14 13:33:04,172 | INFO     | cat /etc/os-release:
[2026-03-14 14:33:48] NAME="CentOS Linux"
[2026-03-14 14:33:48] VERSION="7 (Core)"
[2026-03-14 14:33:48] ID="centos"
[2026-03-14 14:33:48] ID_LIKE="rhel fedora"
[2026-03-14 14:33:48] VERSION_ID="7"
[2026-03-14 14:33:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 14:33:48] ANSI_COLOR="0;31"
[2026-03-14 14:33:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 14:33:48] HOME_URL="https://www.centos.org/"
[2026-03-14 14:33:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 14:33:48] 
[2026-03-14 14:33:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 14:33:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 14:33:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 14:33:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 14:33:48] 
[2026-03-14 14:33:48] 2026-03-14 13:33:04,172 | INFO     | **************************************
[2026-03-14 14:33:48] 2026-03-14 13:33:04,676 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-03-14 14:33:48] 2026-03-14 13:33:04,952 | INFO     | sufficient remaining disk space (494351155200 B)
[2026-03-14 14:33:48] 2026-03-14 13:33:04,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 14:33:48] 2026-03-14 13:33:04,952 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 14:33:48] 2026-03-14 13:33:04,953 | INFO     | update_server=False
[2026-03-14 14:33:48] 2026-03-14 13:33:04,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 14:33:48] 2026-03-14 13:33:04,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:33:48] 2026-03-14 13:33:04,954 | INFO     | aborting loop
[2026-03-14 14:33:48] 2026-03-14 13:33:05,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 14:33:48] 2026-03-14 13:33:05,959 | INFO     | [job] retrieve thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:05,961 | INFO     | [job] job monitor thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:05,992 | INFO     | [payload] validate_post thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:06,033 | INFO     | all data control threads have been joined
[2026-03-14 14:33:48] 2026-03-14 13:33:06,238 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:06,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 14:33:48] 2026-03-14 13:33:06,342 | INFO     | all job control threads have been joined
[2026-03-14 14:33:48] 2026-03-14 13:33:06,420 | INFO     | all payload control threads have been joined
[2026-03-14 14:33:48] 2026-03-14 13:33:06,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 14:33:48] 2026-03-14 13:33:06,754 | INFO     | [job] validate thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:06,809 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:06,815 | INFO     | [payload] failed_post thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,039 | INFO     | [data] control thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,190 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,348 | INFO     | [job] control thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,398 | INFO     | [data] copytool_in thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,426 | INFO     | [payload] control thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,487 | INFO     | [data] copytool_out thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:07,588 | INFO     | [job] queue monitor thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:10,249 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:15,526 | INFO     | job.realtimelogging is not enabled
[2026-03-14 14:33:48] 2026-03-14 13:33:16,532 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 14:33:48] 2026-03-14 13:33:34,237 | INFO     | PID=12796 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 14:33:48] 2026-03-14 13:33:34,237 | INFO     | .. there are 9 such processes running
[2026-03-14 14:33:48] 2026-03-14 13:33:34,238 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 14:33:48] 2026-03-14 13:33:34,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 14:33:48] 2026-03-14 13:33:34,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 14:33:48] 2026-03-14 13:33:40,570 | INFO     | [monitor] cgroup control has ended
[2026-03-14 14:33:48] 2026-03-14 13:33:40,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002656225088)>', '<ExcThread(monitor, started 140002226853632)>']
[2026-03-14 14:33:48] 2026-03-14 13:33:41,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 14:33:48] 2026-03-14 13:33:41,280 | INFO     | [monitor] control thread has ended
[2026-03-14 14:33:48] 2026-03-14 13:33:45,634 | INFO     | all workflow threads have been joined
[2026-03-14 14:33:48] 2026-03-14 13:33:45,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 14:33:48] 2026-03-14 13:33:45,635 | INFO     | traces error code: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:45,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 14:33:48] 2026-03-14 13:33:45,881 [wrapper] ==== pilot stdout END ====
[2026-03-14 14:33:48] 2026-03-14 13:33:45,928 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 14:33:48] 2026-03-14 13:33:46,043 [wrapper] pilotpid: 12796
[2026-03-14 14:33:48] 2026-03-14 13:33:46,137 [wrapper] Pilot exit status: 0
[2026-03-14 14:33:48] 2026-03-14 13:33:46,620 [wrapper] pandaids: 7045203493
[2026-03-14 14:33:48] 2026-03-14 13:33:47,337 [wrapper] cleanup supervisor_pilot 25207 12797
[2026-03-14 14:33:48] 2026-03-14 13:33:47,360 [wrapper] Test setup, not cleaning
[2026-03-14 14:33:48] 2026-03-14 13:33:47,374 [wrapper] apfmon messages muted
[2026-03-14 14:33:48] 2026-03-14 13:33:47,396 [wrapper] ==== wrapper stdout END ====
[2026-03-14 14:33:48] 2026-03-14 13:33:47,403 [wrapper] ==== wrapper stderr END ====
[2026-03-14 14:33:48]  *** Error codes and diagnostics ***
[2026-03-14 14:33:48]     "exeErrorCode": 0,
[2026-03-14 14:33:48]     "exeErrorDiag": "",
[2026-03-14 14:33:48]     "pilotErrorCode": 0,
[2026-03-14 14:33:48]     "pilotErrorDiag": "",
[2026-03-14 14:33:48]  *** Listing of results directory ***
[2026-03-14 14:33:48] total 615844
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc    585013 Mar 13 22:07 pilot3.tar.gz
[2026-03-14 14:33:48] -rwx------. 1 boinc boinc     36322 Mar 13 22:08 runpilot2-wrapper.sh
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc      5111 Mar 13 22:09 queuedata.json
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc       100 Mar 14 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 14:33:48] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 10:49 run_atlas
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc       105 Mar 14 10:49 job.xml
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc      6392 Mar 14 10:49 init_data.xml
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc 437567019 Mar 14 10:49 EVNT.46701403._002479.pool.root.1
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:49 start_atlas.sh
[2026-03-14 14:33:48] drwxrwx--x. 2 boinc boinc        68 Mar 14 10:49 shared
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc    597531 Mar 14 10:49 input.tar.gz
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc         0 Mar 14 10:49 boinc_lockfile
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc      2572 Mar 14 10:49 pandaJob.out
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc       415 Mar 14 10:54 workernode_map.json
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc   1004579 Mar 14 10:54 agis_schedconf.cvmfs.json
[2026-03-14 14:33:48] drwx------. 5 boinc boinc      4096 Mar 14 10:54 pilot3
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc 184507426 Mar 14 14:31 HITS.48955015._021111.pool.root.1
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc       531 Mar 14 14:32 boinc_task_state.xml
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc      1012 Mar 14 14:32 memory_monitor_summary.json
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc   1511579 Mar 14 14:32 agis_ddmendpoints.agis.ALL.json
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc    473586 Mar 14 14:32 log.48955015._021111.job.log.tgz.1
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc      6319 Mar 14 14:33 heartbeat.json
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc        95 Mar 14 14:33 pilot_heartbeat.json
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc      8192 Mar 14 14:33 boinc_mmap_file
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc        28 Mar 14 14:33 wrapper_checkpoint.txt
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc      4953 Mar 14 14:33 pilotlog.txt
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc   1839422 Mar 14 14:33 log.48955015._021111.job.log.1
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc       357 Mar 14 14:33 output.list
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc       620 Mar 14 14:33 runtime_log
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc   2334720 Mar 14 14:33 result.tar.gz
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc      8832 Mar 14 14:33 runtime_log.err
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc       655 Mar 14 14:33 eAyMDmSvOL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmpEoLDmumxUYo.diag
[2026-03-14 14:33:48] -rw-r--r--. 1 boinc boinc     20715 Mar 14 14:33 stderr.txt
[2026-03-14 14:33:48] HITS file was successfully produced:
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc 184507426 Mar 14 14:31 shared/HITS.pool.root.1
[2026-03-14 14:33:48]  *** Contents of shared directory: ***
[2026-03-14 14:33:48] total 610376
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc 437567019 Mar 14 10:49 ATLAS.root_0
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc     15845 Mar 14 10:49 start_atlas.sh
[2026-03-14 14:33:48] -rw-r--r--. 2 boinc boinc    597531 Mar 14 10:49 input.tar.gz
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc 184507426 Mar 14 14:31 HITS.pool.root.1
[2026-03-14 14:33:48] -rw-------. 1 boinc boinc   2334720 Mar 14 14:33 result.tar.gz
14:33:50 (8649): run_atlas exited; CPU time 50116.250107
14:33:50 (8649): called boinc_finish(0)

</stderr_txt>
]]>

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