Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:14 (31112): wrapper (7.7.26015): starting
04:18:14 (31112): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 04:18:14] Arguments: --nthreads 12
[2026-03-14 04:18:14] Threads: 12
[2026-03-14 04:18:14] Checking for CVMFS
[2026-03-14 04:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 04:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 04:18:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 04:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 04:18:14] 2.11.2.0 10903 161416 99288 157271 3 9 18553124 20275200 1 130560 0 66511874 99.914 9683205 30117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 04:18:14] CVMFS is ok
[2026-03-14 04:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:18:14] Further information can be found at the LHC@home message board.
[2026-03-14 04:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:18:14] Checking for apptainer binary...
[2026-03-14 04:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 04:18:14] Running /usr/bin/apptainer --version
[2026-03-14 04:18:14] apptainer version 1.3.2-1.el7
[2026-03-14 04:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:18:16] c-205-22.aglt2.org
[2026-03-14 04:18:16] apptainer works
[2026-03-14 04:18:16] Set ATHENA_PROC_NUMBER=12
[2026-03-14 04:18:16] Set ATHENA_CORE_NUMBER=12
[2026-03-14 04:18:16] Starting ATLAS job with PandaID=7045605261
[2026-03-14 04:18:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:49:08 (20144): wrapper (7.7.26015): starting
04:49:08 (20144): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 04:49:08] Arguments: --nthreads 12
[2026-03-14 04:49:08] Threads: 12
[2026-03-14 04:49:08] This job has been restarted, cleaning up previous attempt
[2026-03-14 04:49:08] Checking for CVMFS
[2026-03-14 04:49:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 04:49:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 04:49:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 04:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 04:49:09] 2.11.2.0 10903 161447 99488 157271 0 188 18585194 20275200 1 130560 0 66562310 99.914 9683209 30117 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 04:49:09] CVMFS is ok
[2026-03-14 04:49:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 04:49:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 04:49:09] Further information can be found at the LHC@home message board.
[2026-03-14 04:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 04:49:09] Checking for apptainer binary...
[2026-03-14 04:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 04:49:09] Running /usr/bin/apptainer --version
[2026-03-14 04:49:09] apptainer version 1.3.2-1.el7
[2026-03-14 04:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 04:49:10] c-205-22.aglt2.org
[2026-03-14 04:49:10] apptainer works
[2026-03-14 04:49:10] Set ATHENA_PROC_NUMBER=12
[2026-03-14 04:49:10] Set ATHENA_CORE_NUMBER=12
[2026-03-14 04:49:10] Starting ATLAS job with PandaID=7045605261
[2026-03-14 04:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:55:37]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:55:37]  guid=5c87a463-e0b8-4adf-a3b2-64592f4bcf7a
[2026-03-14 05:55:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 05:55:37]  is_altstaged=None
[2026-03-14 05:55:37]  is_tar=False
[2026-03-14 05:55:37]  lfn=log.48955010._037541.job.log.tgz.1
[2026-03-14 05:55:37]  mtime=0
[2026-03-14 05:55:37]  protocol_id=None
[2026-03-14 05:55:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 05:55:37]  replicas=None
[2026-03-14 05:55:37]  scope=mc23_13p6TeV
[2026-03-14 05:55:37]  status=None
[2026-03-14 05:55:37]  status_code=0
[2026-03-14 05:55:37]  storage_token=
[2026-03-14 05:55:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045605261/log.48955010._037541.job.log.tgz.1
[2026-03-14 05:55:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/88/log.48955010._037541.job.log.tgz.1
[2026-03-14 05:55:37]  workdir=None
[2026-03-14 05:55:37] ]
[2026-03-14 05:55:37] 2026-03-14 09:54:42,872 | INFO     | transferring file log.48955010._037541.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045605261/log.48955010._037541.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 05:55:37] 2026-03-14 09:54:42,873 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045605261/log.48955010._037541.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._037541.job
[2026-03-14 05:55:37] 2026-03-14 09:54:42,896 | INFO     | adding to output.list: log.48955010._037541.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/88/log.48955010._037541.job.log.tg
[2026-03-14 05:55:37] 2026-03-14 09:54:42,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 05:55:37] 2026-03-14 09:54:42,897 | INFO     | summary of transferred files:
[2026-03-14 05:55:37] 2026-03-14 09:54:42,897 | INFO     |  -- lfn=log.48955010._037541.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 05:55:37] 2026-03-14 09:54:42,897 | INFO     | stage-out finished correctly
[2026-03-14 05:55:37] 2026-03-14 09:54:42,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 05:55:37] 2026-03-14 09:54:43,060 | INFO     | job 7045605261 has state=finished
[2026-03-14 05:55:37] 2026-03-14 09:54:43,060 | INFO     | preparing for final server update for job 7045605261 in state='finished'
[2026-03-14 05:55:37] 2026-03-14 09:54:43,061 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045605261/jobReport.json
[2026-03-14 05:55:37] 2026-03-14 09:54:43,062 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 05:55:37] 2026-03-14 09:54:43,063 | INFO     | this job has now completed (state=finished)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,063 | INFO     | log transfer has been attempted: DONE
[2026-03-14 05:55:37] 2026-03-14 09:54:43,063 | INFO     | job 7045605261 has finished - writing final server update
[2026-03-14 05:55:37] 2026-03-14 09:54:43,064 | INFO     | total number of processed events: 400 (read)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,066 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045605261/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,067 | INFO     | extracted standard info from prmon json
[2026-03-14 05:55:37] 2026-03-14 09:54:43,067 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:55:37] 2026-03-14 09:54:43,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:55:37] 2026-03-14 09:54:43,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:55:37] 2026-03-14 09:54:43,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:55:37] 2026-03-14 09:54:43,068 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | sum of square deviations: 57407588.0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | sum of deviations: -5377302500.0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | mean x: 1773480202.0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | mean y: 2757563.701754386
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | intersect: 166122600883.28357
[2026-03-14 05:55:37] 2026-03-14 09:54:43,069 | INFO     | chi2: 0.045665535382914936
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | current memory leak: -93.67 B/s (using 57 data points, chi2=0.05)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | ..............................
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | . Timing measurements:
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | . get job = 0 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | . initial setup = 1 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,070 | INFO     | . payload setup = 7 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,071 | INFO     | . stage-in = 0 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,071 | INFO     | . payload execution = 3894 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,071 | INFO     | . stage-out = 0 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,071 | INFO     | . log creation = 0 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,071 | INFO     | ..............................
[2026-03-14 05:55:37] 2026-03-14 09:54:43,158 | INFO     | time since job start (3918s) is within the limit (345600.0s)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,519 | INFO     | 
[2026-03-14 05:55:37] 2026-03-14 09:54:43,520 | INFO     | job summary report
[2026-03-14 05:55:37] 2026-03-14 09:54:43,520 | INFO     | --------------------------------------------------
[2026-03-14 05:55:37] 2026-03-14 09:54:43,520 | INFO     | PanDA job id: 7045605261
[2026-03-14 05:55:37] 2026-03-14 09:54:43,520 | INFO     | task id: 48955010
[2026-03-14 05:55:37] 2026-03-14 09:54:43,520 | INFO     | errors: (none)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | pilot state: finished 
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | transexitcode: 0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | exeerrorcode: 0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | exeerrordiag: 
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | exitcode: 0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,521 | INFO     | exitmsg: OK
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | cpuconsumptiontime: 42653 s
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | nevents: 400
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | neventsw: 0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | pid: 26642
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | pgrp: 26642
[2026-03-14 05:55:37] 2026-03-14 09:54:43,522 | INFO     | corecount: 12
[2026-03-14 05:55:37] 2026-03-14 09:54:43,523 | INFO     | event service: False
[2026-03-14 05:55:37] 2026-03-14 09:54:43,523 | INFO     | sizes: {0: 2280119, 1: 2280179, 11: 2280207, 3905: 2306009, 3906: 2315201}
[2026-03-14 05:55:37] 2026-03-14 09:54:43,523 | INFO     | --------------------------------------------------
[2026-03-14 05:55:37] 2026-03-14 09:54:43,523 | INFO     | 
[2026-03-14 05:55:37] 2026-03-14 09:54:43,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 05:55:37] 2026-03-14 09:54:43,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:55:37] 2026-03-14 09:54:43,551 | INFO     | job 7045605261 has completed (purged errors)
[2026-03-14 05:55:37] 2026-03-14 09:54:43,552 | INFO     | overall cleanup function is called
[2026-03-14 05:55:37] 2026-03-14 09:54:44,560 | INFO     | --- collectZombieJob: --- 10, [26642]
[2026-03-14 05:55:37] 2026-03-14 09:54:44,560 | INFO     | zombie collector waiting for pid 26642
[2026-03-14 05:55:37] 2026-03-14 09:54:44,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:55:37] 2026-03-14 09:54:44,561 | INFO     | collected zombie processes
[2026-03-14 05:55:37] 2026-03-14 09:54:44,561 | INFO     | will attempt to kill all subprocesses of pid=26642
[2026-03-14 05:55:37] 2026-03-14 09:54:44,653 | INFO     | process IDs to be killed: [26642] (in reverse order)
[2026-03-14 05:55:37] 2026-03-14 09:54:44,709 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:55:37] 2026-03-14 09:54:44,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:55:37] 2026-03-14 09:54:44,713 | INFO     | did not find any defunct processes belonging to 26642
[2026-03-14 05:55:37] 2026-03-14 09:54:44,716 | INFO     | did not find any defunct processes belonging to 26642
[2026-03-14 05:55:37] 2026-03-14 09:54:44,716 | INFO     | ready for new job
[2026-03-14 05:55:37] 2026-03-14 09:54:44,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:55:37] 2026-03-14 09:54:44,717 | INFO     | **************************************
[2026-03-14 05:55:37] 2026-03-14 09:54:44,718 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 05:55:37] 2026-03-14 09:54:44,718 | INFO     | **************************************
[2026-03-14 05:55:37] 2026-03-14 09:54:44,718 | INFO     | 
[2026-03-14 05:55:37] 2026-03-14 09:54:44,718 | INFO     | architecture information:
[2026-03-14 05:55:37] 2026-03-14 09:54:44,719 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:55:37] 2026-03-14 09:54:44,734 | INFO     | cat /etc/os-release:
[2026-03-14 05:55:37] NAME="CentOS Linux"
[2026-03-14 05:55:37] VERSION="7 (Core)"
[2026-03-14 05:55:37] ID="centos"
[2026-03-14 05:55:37] ID_LIKE="rhel fedora"
[2026-03-14 05:55:37] VERSION_ID="7"
[2026-03-14 05:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:55:37] ANSI_COLOR="0;31"
[2026-03-14 05:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:55:37] HOME_URL="https://www.centos.org/"
[2026-03-14 05:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:55:37] 
[2026-03-14 05:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:55:37] 
[2026-03-14 05:55:37] 2026-03-14 09:54:44,734 | INFO     | **************************************
[2026-03-14 05:55:37] 2026-03-14 09:54:44,949 | WARNING  | process 26642 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 05:55:37] 2026-03-14 09:54:45,023 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:55:37] 2026-03-14 09:54:45,110 | INFO     | number of running child processes to parent process 26642: 1
[2026-03-14 05:55:37] 2026-03-14 09:54:45,110 | INFO     | maximum number of monitored processes: 6
[2026-03-14 05:55:37] 2026-03-14 09:54:45,110 | INFO     | aborting job monitoring since job object (job id=7045605261) has expired
[2026-03-14 05:55:37] 2026-03-14 09:54:45,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 05:55:37] 2026-03-14 09:54:45,254 | INFO     | sufficient remaining disk space (28897705984 B)
[2026-03-14 05:55:37] 2026-03-14 09:54:45,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:55:37] 2026-03-14 09:54:45,254 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:55:37] 2026-03-14 09:54:45,255 | INFO     | update_server=False
[2026-03-14 05:55:37] 2026-03-14 09:54:45,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:55:37] 2026-03-14 09:54:45,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:55:37] 2026-03-14 09:54:45,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:55:37] 2026-03-14 09:54:45,256 | INFO     | will abort loop
[2026-03-14 05:55:37] 2026-03-14 09:54:45,355 | INFO     | all payload control threads have been joined
[2026-03-14 05:55:37] 2026-03-14 09:54:45,476 | INFO     | all data control threads have been joined
[2026-03-14 05:55:37] 2026-03-14 09:54:45,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:55:37] 2026-03-14 09:54:46,260 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,261 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,314 | INFO     | all job control threads have been joined
[2026-03-14 05:55:37] 2026-03-14 09:54:46,360 | INFO     | [payload] control thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,387 | INFO     | [job] validate thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,455 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,481 | INFO     | [data] control thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,653 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:46,854 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:47,023 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:47,023 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:47,319 | INFO     | [job] control thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:47,425 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:47,991 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:48,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:55:37] 2026-03-14 09:54:49,163 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:49,261 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:54:56,043 | INFO     | job.realtimelogging is not enabled
[2026-03-14 05:55:37] 2026-03-14 09:54:57,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:55:37] 2026-03-14 09:55:16,349 | INFO     | PID=24208 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 05:55:37] 2026-03-14 09:55:16,350 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:55:37] 2026-03-14 09:55:16,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:55:37] 2026-03-14 09:55:16,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:55:37] 2026-03-14 09:55:31,472 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:55:37] 2026-03-14 09:55:31,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523252291392)>', '<ExcThread(monitor, started 140522068899584)>']
[2026-03-14 05:55:37] 2026-03-14 09:55:32,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:55:37] 2026-03-14 09:55:32,432 | INFO     | [monitor] control thread has ended
[2026-03-14 05:55:37] 2026-03-14 09:55:36,904 | INFO     | all workflow threads have been joined
[2026-03-14 05:55:37] 2026-03-14 09:55:36,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:55:37] 2026-03-14 09:55:36,918 | INFO     | traces error code: 0
[2026-03-14 05:55:37] 2026-03-14 09:55:36,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:55:37] 2026-03-14 09:55:37,005 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:55:37] 2026-03-14 09:55:37,009 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:55:37] 2026-03-14 09:55:37,013 [wrapper] pilotpid: 24208
[2026-03-14 05:55:37] 2026-03-14 09:55:37,016 [wrapper] Pilot exit status: 0
[2026-03-14 05:55:37] 2026-03-14 09:55:37,034 [wrapper] pandaids: 7045605261 7045605261
[2026-03-14 05:55:37] 2026-03-14 09:55:37,078 [wrapper] cleanup supervisor_pilot 12634 24209
[2026-03-14 05:55:37] 2026-03-14 09:55:37,082 [wrapper] Test setup, not cleaning
[2026-03-14 05:55:37] 2026-03-14 09:55:37,086 [wrapper] apfmon messages muted
[2026-03-14 05:55:37] 2026-03-14 09:55:37,090 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:55:37] 2026-03-14 09:55:37,094 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:55:37]  *** Error codes and diagnostics ***
[2026-03-14 05:55:37]     "exeErrorCode": 0,
[2026-03-14 05:55:37]     "exeErrorDiag": "",
[2026-03-14 05:55:37]     "pilotErrorCode": 0,
[2026-03-14 05:55:37]     "pilotErrorDiag": "",
[2026-03-14 05:55:37]  *** Listing of results directory ***
[2026-03-14 05:55:37] total 1051336
[2026-03-14 05:55:37] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 21:49 pilot3.tar.gz
[2026-03-14 05:55:37] -rwx------ 1 boincer umatlas     36322 Mar 13 21:52 runpilot2-wrapper.sh
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 21:56 queuedata.json
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas       100 Mar 14 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:55:37] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 04:18 run_atlas
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas       105 Mar 14 04:18 job.xml
[2026-03-14 05:55:37] -rw-r--r-- 3 boincer umatlas 443542172 Mar 14 04:18 EVNT.46701403._001773.pool.root.1
[2026-03-14 05:55:37] -rw-r--r-- 3 boincer umatlas 443542172 Mar 14 04:18 ATLAS.root_0
[2026-03-14 05:55:37] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 04:18 start_atlas.sh
[2026-03-14 05:55:37] drwxrwx--x 2 boincer umatlas      4096 Mar 14 04:18 shared
[2026-03-14 05:55:37] -rw-r--r-- 2 boincer umatlas    597537 Mar 14 04:18 input.tar.gz
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas         0 Mar 14 04:18 boinc_lockfile
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas   1511579 Mar 14 04:18 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas      2563 Mar 14 04:49 pandaJob.out
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas        57 Mar 14 04:49 setup.sh.local
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas   1004579 Mar 14 04:49 agis_schedconf.cvmfs.json
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas       434 Mar 14 04:49 workernode_map.json
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas 183626409 Mar 14 05:54 HITS.48955010._037541.pool.root.1
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas        96 Mar 14 05:54 pilot_heartbeat.json
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas       530 Mar 14 05:54 boinc_task_state.xml
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas      1043 Mar 14 05:54 memory_monitor_summary.json
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas    380091 Mar 14 05:54 log.48955010._037541.job.log.tgz.1
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas      6408 Mar 14 05:54 heartbeat.json
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 05:55 init_data.xml
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 05:55 boinc_mmap_file
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas        27 Mar 14 05:55 wrapper_checkpoint.txt
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas      5331 Mar 14 05:55 pilotlog.txt
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas    576855 Mar 14 05:55 log.48955010._037541.job.log.1
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas       357 Mar 14 05:55 output.list
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas       620 Mar 14 05:55 runtime_log
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas    972800 Mar 14 05:55 result.tar.gz
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas      9428 Mar 14 05:55 runtime_log.err
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas       783 Mar 14 05:55 MgEMDmsLTL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyjrLDmtXALTm.diag
[2026-03-14 05:55:37] -rw-r--r-- 1 boincer umatlas     23496 Mar 14 05:55 stderr.txt
[2026-03-14 05:55:37] HITS file was successfully produced:
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas 183626409 Mar 14 05:54 shared/HITS.pool.root.1
[2026-03-14 05:55:37]  *** Contents of shared directory: ***
[2026-03-14 05:55:37] total 614032
[2026-03-14 05:55:37] -rw-r--r-- 3 boincer umatlas 443542172 Mar 14 04:18 ATLAS.root_0
[2026-03-14 05:55:37] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 04:18 start_atlas.sh
[2026-03-14 05:55:37] -rw-r--r-- 2 boincer umatlas    597537 Mar 14 04:18 input.tar.gz
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas 183626409 Mar 14 05:54 HITS.pool.root.1
[2026-03-14 05:55:37] -rw------- 1 boincer umatlas    972800 Mar 14 05:55 result.tar.gz
05:55:38 (20144): run_atlas exited; CPU time 42639.349587
05:55:38 (20144): called boinc_finish(0)

</stderr_txt>
]]>

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