Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:28 (773): wrapper (7.7.26015): starting
03:56:28 (773): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 03:56:28] Arguments: --nthreads 12
[2026-03-14 03:56:28] Threads: 12
[2026-03-14 03:56:28] Checking for CVMFS
[2026-03-14 03:56:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 03:56:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 03:56:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 03:56:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 03:56:28] 2.11.2.0 2913 442930 91276 157270 0 49 17949395 20275200 1 130560 1 192039845 99.951 25886630 16965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 03:56:28] CVMFS is ok
[2026-03-14 03:56:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 03:56:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 03:56:28] Further information can be found at the LHC@home message board.
[2026-03-14 03:56:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:56:28] Checking for apptainer binary...
[2026-03-14 03:56:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 03:56:28] Running /usr/bin/apptainer --version
[2026-03-14 03:56:28] apptainer version 1.3.2-1.el7
[2026-03-14 03:56:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:56:30] c-205-6.aglt2.org
[2026-03-14 03:56:30] apptainer works
[2026-03-14 03:56:30] Set ATHENA_PROC_NUMBER=12
[2026-03-14 03:56:30] Set ATHENA_CORE_NUMBER=12
[2026-03-14 03:56:30] Starting ATLAS job with PandaID=7045605305
[2026-03-14 03:56:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 05:05:03]  *** The last 200 lines of the pilot log: ***
[2026-03-14 05:05:03]  guid=02391067-4daf-4c8a-85d0-3da0f9daf316
[2026-03-14 05:05:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 05:05:03]  is_altstaged=None
[2026-03-14 05:05:03]  is_tar=False
[2026-03-14 05:05:03]  lfn=log.48955010._037585.job.log.tgz.1
[2026-03-14 05:05:03]  mtime=0
[2026-03-14 05:05:03]  protocol_id=None
[2026-03-14 05:05:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 05:05:03]  replicas=None
[2026-03-14 05:05:03]  scope=mc23_13p6TeV
[2026-03-14 05:05:03]  status=None
[2026-03-14 05:05:03]  status_code=0
[2026-03-14 05:05:03]  storage_token=
[2026-03-14 05:05:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045605305/log.48955010._037585.job.log.tgz.1
[2026-03-14 05:05:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/f6/log.48955010._037585.job.log.tgz.1
[2026-03-14 05:05:03]  workdir=None
[2026-03-14 05:05:03] ]
[2026-03-14 05:05:03] 2026-03-14 09:04:26,993 | INFO     | transferring file log.48955010._037585.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045605305/log.48955010._037585.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 05:05:03] 2026-03-14 09:04:26,993 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045605305/log.48955010._037585.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._037585.job
[2026-03-14 05:05:03] 2026-03-14 09:04:27,015 | INFO     | adding to output.list: log.48955010._037585.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/f6/log.48955010._037585.job.log.tg
[2026-03-14 05:05:03] 2026-03-14 09:04:27,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 05:05:03] 2026-03-14 09:04:27,017 | INFO     | summary of transferred files:
[2026-03-14 05:05:03] 2026-03-14 09:04:27,017 | INFO     |  -- lfn=log.48955010._037585.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 05:05:03] 2026-03-14 09:04:27,017 | INFO     | stage-out finished correctly
[2026-03-14 05:05:03] 2026-03-14 09:04:27,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 05:05:03] 2026-03-14 09:04:28,037 | INFO     | monitor loop #309: job 0:7045605305 is in state 'finished'
[2026-03-14 05:05:03] 2026-03-14 09:04:28,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,373 | INFO     | time since job start (4057s) is within the limit (345600.0s)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,727 | INFO     | job 7045605305 has state=finished
[2026-03-14 05:05:03] 2026-03-14 09:04:28,727 | INFO     | preparing for final server update for job 7045605305 in state='finished'
[2026-03-14 05:05:03] 2026-03-14 09:04:28,727 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045605305/jobReport.json
[2026-03-14 05:05:03] 2026-03-14 09:04:28,729 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 05:05:03] 2026-03-14 09:04:28,729 | INFO     | this job has now completed (state=finished)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,730 | INFO     | log transfer has been attempted: DONE
[2026-03-14 05:05:03] 2026-03-14 09:04:28,730 | INFO     | job 7045605305 has finished - writing final server update
[2026-03-14 05:05:03] 2026-03-14 09:04:28,730 | INFO     | total number of processed events: 400 (read)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,732 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045605305/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,732 | INFO     | extracted standard info from prmon json
[2026-03-14 05:05:03] 2026-03-14 09:04:28,732 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 05:05:03] 2026-03-14 09:04:28,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 05:05:03] 2026-03-14 09:04:28,733 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 05:05:03] 2026-03-14 09:04:28,733 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 05:05:03] 2026-03-14 09:04:28,734 | INFO     | fitting pss+swap vs Time
[2026-03-14 05:05:03] 2026-03-14 09:04:28,734 | INFO     | sum of square deviations: 66959395.0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | sum of deviations: -5122968978.0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | mean x: 1773477139.5
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | mean y: 2734386.4
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | intersect: 135688971827.02618
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | chi2: 0.05468944435013576
[2026-03-14 05:05:03] 2026-03-14 09:04:28,735 | INFO     | current memory leak: -76.51 B/s (using 60 data points, chi2=0.05)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | ..............................
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . Timing measurements:
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . get job = 0 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . initial setup = 7 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . payload setup = 7 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . stage-in = 0 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,736 | INFO     | . payload execution = 4033 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,737 | INFO     | . stage-out = 0 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,737 | INFO     | . log creation = 0 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,737 | INFO     | ..............................
[2026-03-14 05:05:03] 2026-03-14 09:04:28,813 | INFO     | 
[2026-03-14 05:05:03] 2026-03-14 09:04:28,813 | INFO     | job summary report
[2026-03-14 05:05:03] 2026-03-14 09:04:28,813 | INFO     | --------------------------------------------------
[2026-03-14 05:05:03] 2026-03-14 09:04:28,813 | INFO     | PanDA job id: 7045605305
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | task id: 48955010
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | errors: (none)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | pilot state: finished 
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | transexitcode: 0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,814 | INFO     | exeerrorcode: 0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | exeerrordiag: 
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | exitcode: 0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | exitmsg: OK
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | cpuconsumptiontime: 43226 s
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | nevents: 400
[2026-03-14 05:05:03] 2026-03-14 09:04:28,815 | INFO     | neventsw: 0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | pid: 9370
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | pgrp: 9370
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | corecount: 12
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | event service: False
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | sizes: {0: 2279089, 1: 2280207, 12: 2280207, 4043: 2306091, 4044: 2315089, 4045: 2315145, 4046: 2315467}
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | --------------------------------------------------
[2026-03-14 05:05:03] 2026-03-14 09:04:28,816 | INFO     | 
[2026-03-14 05:05:03] 2026-03-14 09:04:28,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 05:05:03] 2026-03-14 09:04:28,841 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,842 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,844 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 05:05:03] 2026-03-14 09:04:28,845 | INFO     | job 7045605305 has completed (purged errors)
[2026-03-14 05:05:03] 2026-03-14 09:04:28,845 | INFO     | overall cleanup function is called
[2026-03-14 05:05:03] 2026-03-14 09:04:29,494 | INFO     | PID=4931 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 05:05:03] 2026-03-14 09:04:29,853 | INFO     | --- collectZombieJob: --- 10, [9370]
[2026-03-14 05:05:03] 2026-03-14 09:04:29,853 | INFO     | zombie collector waiting for pid 9370
[2026-03-14 05:05:03] 2026-03-14 09:04:29,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 05:05:03] 2026-03-14 09:04:29,853 | INFO     | collected zombie processes
[2026-03-14 05:05:03] 2026-03-14 09:04:29,854 | INFO     | will attempt to kill all subprocesses of pid=9370
[2026-03-14 05:05:03] 2026-03-14 09:04:29,939 | INFO     | process IDs to be killed: [9370] (in reverse order)
[2026-03-14 05:05:03] 2026-03-14 09:04:29,993 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 05:05:03] 2026-03-14 09:04:29,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 05:05:03] 2026-03-14 09:04:29,997 | INFO     | did not find any defunct processes belonging to 9370
[2026-03-14 05:05:03] 2026-03-14 09:04:30,000 | INFO     | did not find any defunct processes belonging to 9370
[2026-03-14 05:05:03] 2026-03-14 09:04:30,000 | INFO     | ready for new job
[2026-03-14 05:05:03] 2026-03-14 09:04:30,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 05:05:03] 2026-03-14 09:04:30,001 | INFO     | **************************************
[2026-03-14 05:05:03] 2026-03-14 09:04:30,001 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 05:05:03] 2026-03-14 09:04:30,001 | INFO     | **************************************
[2026-03-14 05:05:03] 2026-03-14 09:04:30,002 | INFO     | 
[2026-03-14 05:05:03] 2026-03-14 09:04:30,002 | INFO     | architecture information:
[2026-03-14 05:05:03] 2026-03-14 09:04:30,002 | INFO     | executing command: cat /etc/os-release
[2026-03-14 05:05:03] 2026-03-14 09:04:30,017 | INFO     | cat /etc/os-release:
[2026-03-14 05:05:03] NAME="CentOS Linux"
[2026-03-14 05:05:03] VERSION="7 (Core)"
[2026-03-14 05:05:03] ID="centos"
[2026-03-14 05:05:03] ID_LIKE="rhel fedora"
[2026-03-14 05:05:03] VERSION_ID="7"
[2026-03-14 05:05:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 05:05:03] ANSI_COLOR="0;31"
[2026-03-14 05:05:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 05:05:03] HOME_URL="https://www.centos.org/"
[2026-03-14 05:05:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 05:05:03] 
[2026-03-14 05:05:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 05:05:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 05:05:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 05:05:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 05:05:03] 
[2026-03-14 05:05:03] 2026-03-14 09:04:30,017 | INFO     | **************************************
[2026-03-14 05:05:03] 2026-03-14 09:04:30,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 05:05:03] 2026-03-14 09:04:30,536 | INFO     | sufficient remaining disk space (28895608832 B)
[2026-03-14 05:05:03] 2026-03-14 09:04:30,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 05:05:03] 2026-03-14 09:04:30,536 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 05:05:03] 2026-03-14 09:04:30,537 | INFO     | update_server=False
[2026-03-14 05:05:03] 2026-03-14 09:04:30,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 05:05:03] 2026-03-14 09:04:30,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 05:05:03] 2026-03-14 09:04:30,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:05:03] 2026-03-14 09:04:30,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 05:05:03] 2026-03-14 09:04:30,541 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 05:05:03] 2026-03-14 09:04:30,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 05:05:03] 2026-03-14 09:04:30,541 | INFO     | will abort loop
[2026-03-14 05:05:03] 2026-03-14 09:04:30,771 | INFO     | all payload control threads have been joined
[2026-03-14 05:05:03] 2026-03-14 09:04:31,224 | INFO     | all data control threads have been joined
[2026-03-14 05:05:03] 2026-03-14 09:04:31,517 | INFO     | all job control threads have been joined
[2026-03-14 05:05:03] 2026-03-14 09:04:31,542 | INFO     | [job] retrieve thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:31,543 | INFO     | [job] queue monitor thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:31,547 | INFO     | [job] job monitor thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:31,673 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:31,776 | INFO     | [payload] control thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,043 | INFO     | [payload] validate_post thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,090 | INFO     | [payload] failed_post thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,146 | INFO     | [job] validate thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,146 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,229 | INFO     | [data] control thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,400 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,406 | INFO     | [data] copytool_in thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,523 | INFO     | [job] control thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:32,543 | INFO     | [data] copytool_out thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:33,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 05:05:03] 2026-03-14 09:04:37,732 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:41,146 | INFO     | job.realtimelogging is not enabled
[2026-03-14 05:05:03] 2026-03-14 09:04:42,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 05:05:03] 2026-03-14 09:04:57,174 | INFO     | [monitor] cgroup control has ended
[2026-03-14 05:05:03] 2026-03-14 09:04:58,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639969187648)>', '<ExcThread(monitor, started 139639671199488)>']
[2026-03-14 05:05:03] 2026-03-14 09:05:01,689 | INFO     | PID=4931 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 05:05:03] 2026-03-14 09:05:01,690 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 05:05:03] 2026-03-14 09:05:01,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 05:05:03] 2026-03-14 09:05:01,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 05:05:03] 2026-03-14 09:05:01,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 05:05:03] 2026-03-14 09:05:01,690 | INFO     | [monitor] control thread has ended
[2026-03-14 05:05:03] 2026-03-14 09:05:03,412 | INFO     | all workflow threads have been joined
[2026-03-14 05:05:03] 2026-03-14 09:05:03,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 05:05:03] 2026-03-14 09:05:03,413 | INFO     | traces error code: 0
[2026-03-14 05:05:03] 2026-03-14 09:05:03,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 05:05:03] 2026-03-14 09:05:03,504 [wrapper] ==== pilot stdout END ====
[2026-03-14 05:05:03] 2026-03-14 09:05:03,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 05:05:03] 2026-03-14 09:05:03,511 [wrapper] pilotpid: 4931
[2026-03-14 05:05:03] 2026-03-14 09:05:03,515 [wrapper] Pilot exit status: 0
[2026-03-14 05:05:03] 2026-03-14 09:05:03,530 [wrapper] pandaids: 7045605305
[2026-03-14 05:05:03] 2026-03-14 09:05:03,571 [wrapper] cleanup supervisor_pilot 27751 4932
[2026-03-14 05:05:03] 2026-03-14 09:05:03,575 [wrapper] Test setup, not cleaning
[2026-03-14 05:05:03] 2026-03-14 09:05:03,579 [wrapper] apfmon messages muted
[2026-03-14 05:05:03] 2026-03-14 09:05:03,583 [wrapper] ==== wrapper stdout END ====
[2026-03-14 05:05:03] 2026-03-14 09:05:03,586 [wrapper] ==== wrapper stderr END ====
[2026-03-14 05:05:03]  *** Error codes and diagnostics ***
[2026-03-14 05:05:03]     "exeErrorCode": 0,
[2026-03-14 05:05:03]     "exeErrorDiag": "",
[2026-03-14 05:05:03]     "pilotErrorCode": 0,
[2026-03-14 05:05:03]     "pilotErrorDiag": "",
[2026-03-14 05:05:03]  *** Listing of results directory ***
[2026-03-14 05:05:03] total 620508
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 21:49 pilot3.tar.gz
[2026-03-14 05:05:03] -rwx------ 1 boincer umatlas     36322 Mar 13 21:49 runpilot2-wrapper.sh
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 21:50 queuedata.json
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas       100 Mar 14 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 05:05:03] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 03:56 run_atlas
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas       105 Mar 14 03:56 job.xml
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas 440407482 Mar 14 03:56 EVNT.46701403._001774.pool.root.1
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 03:56 start_atlas.sh
[2026-03-14 05:05:03] drwxrwx--x 2 boincer umatlas      4096 Mar 14 03:56 shared
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 03:56 input.tar.gz
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas         0 Mar 14 03:56 boinc_lockfile
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas      2563 Mar 14 03:56 pandaJob.out
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas        57 Mar 14 03:56 setup.sh.local
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas   1004579 Mar 14 03:56 agis_schedconf.cvmfs.json
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas   1511579 Mar 14 03:56 agis_ddmendpoints.agis.ALL.json
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas       444 Mar 14 03:56 workernode_map.json
[2026-03-14 05:05:03] drwx------ 5 boincer umatlas      4096 Mar 14 03:56 pilot3
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas 189105638 Mar 14 05:03 HITS.48955010._037585.pool.root.1
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas       530 Mar 14 05:04 boinc_task_state.xml
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas      1044 Mar 14 05:04 memory_monitor_summary.json
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas    376294 Mar 14 05:04 log.48955010._037585.job.log.tgz.1
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas      6420 Mar 14 05:04 heartbeat.json
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas      5952 Mar 14 05:04 init_data.xml
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 05:05 boinc_mmap_file
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas        95 Mar 14 05:05 pilot_heartbeat.json
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas        27 Mar 14 05:05 wrapper_checkpoint.txt
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas      4999 Mar 14 05:05 pilotlog.txt
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas    596364 Mar 14 05:05 log.48955010._037585.job.log.1
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas       357 Mar 14 05:05 output.list
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas       620 Mar 14 05:05 runtime_log
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas    993280 Mar 14 05:05 result.tar.gz
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas      9338 Mar 14 05:05 runtime_log.err
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas       658 Mar 14 05:05 e1oMDmjJTL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWhrLDmBoFT5n.diag
[2026-03-14 05:05:03] -rw-r--r-- 1 boincer umatlas     21428 Mar 14 05:05 stderr.txt
[2026-03-14 05:05:03] HITS file was successfully produced:
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas 189105638 Mar 14 05:03 shared/HITS.pool.root.1
[2026-03-14 05:05:03]  *** Contents of shared directory: ***
[2026-03-14 05:05:03] total 616340
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas 440407482 Mar 14 03:56 ATLAS.root_0
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 03:56 start_atlas.sh
[2026-03-14 05:05:03] -rw-r--r-- 2 boincer umatlas    597531 Mar 14 03:56 input.tar.gz
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas 189105638 Mar 14 05:03 HITS.pool.root.1
[2026-03-14 05:05:03] -rw------- 1 boincer umatlas    993280 Mar 14 05:05 result.tar.gz
05:05:04 (773): run_atlas exited; CPU time 43210.913655
05:05:04 (773): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN