Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:36:01 (2349334): wrapper (7.7.26015): starting
18:36:01 (2349334): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 18:36:01] Arguments: --nthreads 3
[2026-03-14 18:36:01] Threads: 3
[2026-03-14 18:36:01] Checking for CVMFS
[2026-03-14 18:36:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:36:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:36:02] 2.9.2.0 12665 17724 72900 157285 3 50 22445189 36864000 0 130560 0 6537224 99.981 668139 15928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 18:36:02] CVMFS is ok
[2026-03-14 18:36:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:36:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:36:02] Further information can be found at the LHC@home message board.
[2026-03-14 18:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:36:02] Checking for apptainer binary...
[2026-03-14 18:36:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:36:02] Running /usr/bin/apptainer --version
[2026-03-14 18:36:02] apptainer version 1.4.1-1.1
[2026-03-14 18:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:36:02] thA335
[2026-03-14 18:36:02] apptainer works
[2026-03-14 18:36:02] Set ATHENA_PROC_NUMBER=3
[2026-03-14 18:36:02] Set ATHENA_CORE_NUMBER=3
[2026-03-14 18:36:02] Starting ATLAS job with PandaID=7045584811
[2026-03-14 18:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 20:06:01]  *** The last 200 lines of the pilot log: ***
[2026-03-14 20:06:01] 2026-03-14 19:05:30,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 20:06:01] 2026-03-14 19:05:30,175 | INFO     | did not find any defunct processes belonging to 2357809
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | did not find any defunct processes belonging to 2357809
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | ready for new job
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | **************************************
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | **************************************
[2026-03-14 20:06:01] 2026-03-14 19:05:30,176 | INFO     | 
[2026-03-14 20:06:01] 2026-03-14 19:05:30,177 | INFO     | architecture information:
[2026-03-14 20:06:01] 2026-03-14 19:05:30,177 | INFO     | executing command: cat /etc/os-release
[2026-03-14 20:06:01] 2026-03-14 19:05:30,187 | INFO     | cat /etc/os-release:
[2026-03-14 20:06:01] NAME="CentOS Linux"
[2026-03-14 20:06:01] VERSION="7 (Core)"
[2026-03-14 20:06:01] ID="centos"
[2026-03-14 20:06:01] ID_LIKE="rhel fedora"
[2026-03-14 20:06:01] VERSION_ID="7"
[2026-03-14 20:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 20:06:01] ANSI_COLOR="0;31"
[2026-03-14 20:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 20:06:01] HOME_URL="https://www.centos.org/"
[2026-03-14 20:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 20:06:01] 
[2026-03-14 20:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 20:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 20:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 20:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 20:06:01] 
[2026-03-14 20:06:01] 2026-03-14 19:05:30,187 | INFO     | **************************************
[2026-03-14 20:06:01] 2026-03-14 19:05:30,691 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 20:06:01] 2026-03-14 19:05:30,704 | INFO     | sufficient remaining disk space (837385453568 B)
[2026-03-14 20:06:01] 2026-03-14 19:05:30,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 20:06:01] 2026-03-14 19:05:30,705 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 20:06:01] 2026-03-14 19:05:30,705 | INFO     | update_server=False
[2026-03-14 20:06:01] 2026-03-14 19:05:30,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 20:06:01] 2026-03-14 19:05:30,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:06:01] 2026-03-14 19:05:30,797 | INFO     | all job control threads have been joined
[2026-03-14 20:06:01] 2026-03-14 19:05:31,323 | INFO     | all payload control threads have been joined
[2026-03-14 20:06:01] 2026-03-14 19:05:31,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 20:06:01] 2026-03-14 19:05:31,358 | INFO     | aborting loop
[2026-03-14 20:06:01] 2026-03-14 19:05:31,617 | INFO     | [monitor] cgroup control has ended
[2026-03-14 20:06:01] 2026-03-14 19:05:31,693 | INFO     | all data control threads have been joined
[2026-03-14 20:06:01] 2026-03-14 19:05:31,706 | INFO     | [job] queue monitor thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:31,710 | INFO     | [job] retrieve thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:31,759 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:31,803 | INFO     | [job] control thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 20:06:01] 2026-03-14 19:05:32,268 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 20:06:01] 2026-03-14 19:05:32,329 | INFO     | [payload] control thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,340 | INFO     | [payload] failed_post thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,354 | INFO     | [job] validate thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,364 | INFO     | [job] job monitor thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,371 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,517 | INFO     | [data] copytool_in thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,699 | INFO     | [data] control thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:32,837 | INFO     | [payload] validate_post thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:34,151 | INFO     | [data] copytool_out thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:36,275 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:41,139 | INFO     | job.realtimelogging is not enabled
[2026-03-14 20:06:01] 2026-03-14 19:05:42,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 20:06:01] 2026-03-14 19:05:42,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951935805248)>', '<ExcThread(monitor, started 139951148615424)>']
[2026-03-14 20:06:01] 2026-03-14 19:05:47,454 | INFO     | all workflow threads have been joined
[2026-03-14 20:06:01] 2026-03-14 19:05:47,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 20:06:01] 2026-03-14 19:05:47,456 | INFO     | traces error code: 0
[2026-03-14 20:06:01] 2026-03-14 19:05:47,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | INFO     | PID=2353378 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 20:06:01] 2026-03-14 19:06:01,398 | INFO     | [monitor] control thread has ended
[2026-03-14 20:06:01] 2026-03-14 19:06:01,444 [wrapper] ==== pilot stdout END ====
[2026-03-14 20:06:01] 2026-03-14 19:06:01,447 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 20:06:01] 2026-03-14 19:06:01,450 [wrapper] pilotpid: 2353378
[2026-03-14 20:06:01] 2026-03-14 19:06:01,453 [wrapper] Pilot exit status: 0
[2026-03-14 20:06:01] 2026-03-14 19:06:01,460 [wrapper] pandaids: 7045584811
[2026-03-14 20:06:01] 2026-03-14 19:06:01,478 [wrapper] cleanup supervisor_pilot 2362966 2353379
[2026-03-14 20:06:01] 2026-03-14 19:06:01,480 [wrapper] Test setup, not cleaning
[2026-03-14 20:06:01] 2026-03-14 19:06:01,483 [wrapper] apfmon messages muted
[2026-03-14 20:06:01] 2026-03-14 19:06:01,485 [wrapper] ==== wrapper stdout END ====
[2026-03-14 20:06:01] 2026-03-14 19:06:01,488 [wrapper] ==== wrapper stderr END ====
[2026-03-14 20:06:01]  *** Error codes and diagnostics ***
[2026-03-14 20:06:01]     "exeErrorCode": 0,
[2026-03-14 20:06:01]     "exeErrorDiag": "",
[2026-03-14 20:06:01]     "pilotErrorCode": 0,
[2026-03-14 20:06:01]     "pilotErrorDiag": "",
[2026-03-14 20:06:01]  *** Listing of results directory ***
[2026-03-14 20:06:01] total 618776
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-14 20:06:01] -rwx------ 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      5111 Mar 14 02:50 queuedata.json
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc       100 Mar 14 18:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 20:06:01] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 18:36 run_atlas
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc       105 Mar 14 18:36 job.xml
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc 443387792 Mar 14 18:36 EVNT.46701403._002510.pool.root.1
[2026-03-14 20:06:01] drwxrwx--x 2 boinc boinc      4096 Mar 14 18:36 shared
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc    597536 Mar 14 18:36 input.tar.gz
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:36 start_atlas.sh
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:36 boinc_setup_complete
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      6195 Mar 14 18:36 init_data.xml
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:36 boinc_lockfile
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      2571 Mar 14 18:36 pandaJob.out
[2026-03-14 20:06:01] -rw------- 1 boinc boinc   1005897 Mar 14 18:36 agis_schedconf.cvmfs.json
[2026-03-14 20:06:01] -rw------- 1 boinc boinc   1511579 Mar 14 18:36 agis_ddmendpoints.agis.ALL.json
[2026-03-14 20:06:01] -rw------- 1 boinc boinc       425 Mar 14 18:36 workernode_map.json
[2026-03-14 20:06:01] drwx------ 5 boinc boinc      4096 Mar 14 18:36 pilot3
[2026-03-14 20:06:01] -rw------- 1 boinc boinc 184225473 Mar 14 20:05 HITS.48955015._022612.pool.root.1
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc       531 Mar 14 20:05 boinc_task_state.xml
[2026-03-14 20:06:01] -rw------- 1 boinc boinc      1016 Mar 14 20:05 memory_monitor_summary.json
[2026-03-14 20:06:01] -rw------- 1 boinc boinc    267673 Mar 14 20:05 log.48955015._022612.job.log.tgz.1
[2026-03-14 20:06:01] -rw------- 1 boinc boinc      6308 Mar 14 20:05 heartbeat.json
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      8192 Mar 14 20:05 boinc_mmap_file
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc        27 Mar 14 20:05 wrapper_checkpoint.txt
[2026-03-14 20:06:01] -rw------- 1 boinc boinc       747 Mar 14 20:06 pilotlog.txt
[2026-03-14 20:06:01] -rw------- 1 boinc boinc        95 Mar 14 20:06 pilot_heartbeat.json
[2026-03-14 20:06:01] -rw------- 1 boinc boinc    778576 Mar 14 20:06 log.48955015._022612.job.log.1
[2026-03-14 20:06:01] -rw------- 1 boinc boinc       357 Mar 14 20:06 output.list
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc       620 Mar 14 20:06 runtime_log
[2026-03-14 20:06:01] -rw------- 1 boinc boinc   1064960 Mar 14 20:06 result.tar.gz
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      8896 Mar 14 20:06 runtime_log.err
[2026-03-14 20:06:01] -rw------- 1 boinc boinc       657 Mar 14 20:06 3m4MDmiJTL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhgrLDmKyXJym.diag
[2026-03-14 20:06:01] -rw-r--r-- 1 boinc boinc      9952 Mar 14 20:06 stderr.txt
[2026-03-14 20:06:01] HITS file was successfully produced:
[2026-03-14 20:06:01] -rw------- 1 boinc boinc 184225473 Mar 14 20:05 shared/HITS.pool.root.1
[2026-03-14 20:06:01]  *** Contents of shared directory: ***
[2026-03-14 20:06:01] total 614552
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc 443387792 Mar 14 18:36 ATLAS.root_0
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc    597536 Mar 14 18:36 input.tar.gz
[2026-03-14 20:06:01] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:36 start_atlas.sh
[2026-03-14 20:06:01] -rw------- 1 boinc boinc 184225473 Mar 14 20:05 HITS.pool.root.1
[2026-03-14 20:06:01] -rw------- 1 boinc boinc   1064960 Mar 14 20:06 result.tar.gz
20:06:02 (2349334): run_atlas exited; CPU time 15043.649076
20:06:02 (2349334): called boinc_finish(0)

</stderr_txt>
]]>

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