Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:00:28 (6498): wrapper (7.7.26015): starting
14:00:28 (6498): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 14:00:28] Arguments: --nthreads 8
[2026-03-14 14:00:28] Threads: 8
[2026-03-14 14:00:28] Checking for CVMFS
[2026-03-14 14:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 14:00:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 14:00:28] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 14:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 14:00:28] 2.11.2.0 28330 127606 135244 157278 0 210 23346121 25165824 96 130560 157 37780634 99.820 28038884 927 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 14:00:28] CVMFS is ok
[2026-03-14 14:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 14:00:28] Checking for apptainer binary...
[2026-03-14 14:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 14:00:28] Running /usr/bin/apptainer --version
[2026-03-14 14:00:28] apptainer version 1.3.2-1.el7
[2026-03-14 14:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 14:00:30] cg-vwn377.simple-grid.lan
[2026-03-14 14:00:30] apptainer works
[2026-03-14 14:00:30] Set ATHENA_PROC_NUMBER=8
[2026-03-14 14:00:30] Set ATHENA_CORE_NUMBER=8
[2026-03-14 14:00:30] Starting ATLAS job with PandaID=7045583226
[2026-03-14 14:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:33:27]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:33:27] 2026-03-14 16:32:25,104 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7045583226/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,105 | INFO     | extracted standard info from prmon json
[2026-03-14 17:33:27] 2026-03-14 16:32:25,105 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:33:27] 2026-03-14 16:32:25,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:33:27] 2026-03-14 16:32:25,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:33:27] 2026-03-14 16:32:25,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:33:27] 2026-03-14 16:32:25,111 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:33:27] 2026-03-14 16:32:25,111 | INFO     | sum of square deviations: 2790348132.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,113 | INFO     | sum of deviations: 17864971088.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,113 | INFO     | mean x: 1773499589.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,113 | INFO     | mean y: 2457573.1298076925
[2026-03-14 17:33:27] 2026-03-14 16:32:25,114 | INFO     | intersect: -11352225567.849718
[2026-03-14 17:33:27] 2026-03-14 16:32:25,114 | INFO     | chi2: 2.246179414786022
[2026-03-14 17:33:27] 2026-03-14 16:32:25,114 | INFO     | sum of square deviations: 2593916542.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,116 | INFO     | sum of deviations: 30816123594.000004
[2026-03-14 17:33:27] 2026-03-14 16:32:25,116 | INFO     | mean x: 1773499437.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,116 | INFO     | mean y: 2467420.5714285714
[2026-03-14 17:33:27] 2026-03-14 16:32:25,116 | INFO     | intersect: -21066976009.68733
[2026-03-14 17:33:27] 2026-03-14 16:32:25,117 | INFO     | chi2: 1.4746119380723628
[2026-03-14 17:33:27] 2026-03-14 16:32:25,117 | INFO     | current chi2=1.4746119380723628 (change=34.35021582134663 %)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,117 | INFO     | sum of square deviations: 2406926989.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,119 | INFO     | sum of deviations: 29925480497.500004
[2026-03-14 17:33:27] 2026-03-14 16:32:25,119 | INFO     | mean x: 1773499284.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,119 | INFO     | mean y: 2466694.3080808083
[2026-03-14 17:33:27] 2026-03-14 16:32:25,119 | INFO     | intersect: -22047565767.067066
[2026-03-14 17:33:27] 2026-03-14 16:32:25,120 | INFO     | chi2: 1.4755069761366175
[2026-03-14 17:33:27] 2026-03-14 16:32:25,123 | INFO     | current chi2=1.4755069761366175 (change=-0.06069651554731992 %)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,123 | INFO     | right removable region: 197
[2026-03-14 17:33:27] 2026-03-14 16:32:25,123 | INFO     | sum of square deviations: 2593916542.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,125 | INFO     | sum of deviations: -12275845753.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,125 | INFO     | mean x: 1773499742.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,125 | INFO     | mean y: 2480700.2216748768
[2026-03-14 17:33:27] 2026-03-14 16:32:25,126 | INFO     | intersect: 8395661021.663681
[2026-03-14 17:33:27] 2026-03-14 16:32:25,126 | INFO     | chi2: 0.8471321624695076
[2026-03-14 17:33:27] 2026-03-14 16:32:25,126 | INFO     | current chi2=0.8471321624695076 (change=62.28564125852751 %)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,126 | INFO     | sum of square deviations: 2406926989.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,128 | INFO     | sum of deviations: -7232678926.999999
[2026-03-14 17:33:27] 2026-03-14 16:32:25,128 | INFO     | mean x: 1773499894.5
[2026-03-14 17:33:27] 2026-03-14 16:32:25,128 | INFO     | mean y: 2476555.585858586
[2026-03-14 17:33:27] 2026-03-14 16:32:25,128 | INFO     | intersect: 5331743031.031176
[2026-03-14 17:33:27] 2026-03-14 16:32:25,129 | INFO     | chi2: 0.816526022970883
[2026-03-14 17:33:27] 2026-03-14 16:32:25,129 | INFO     | current chi2=0.816526022970883 (change=3.6129119934962137 %)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,129 | INFO     | left removable region: 20
[2026-03-14 17:33:27] 2026-03-14 16:32:25,129 | INFO     | sum of square deviations: 1719429448.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | sum of deviations: 6196161559.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | mean x: 1773499864.0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | mean y: 2486443.2485875706
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | intersect: -6388524071.890925
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | chi2: 0.0010047094736272172
[2026-03-14 17:33:27] 2026-03-14 16:32:25,131 | INFO     | current memory leak: 3.60 B/s (using 177 data points, chi2=0.00)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,132 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,132 | INFO     | ..............................
[2026-03-14 17:33:27] 2026-03-14 16:32:25,132 | INFO     | . Timing measurements:
[2026-03-14 17:33:27] 2026-03-14 16:32:25,132 | INFO     | . get job = 0 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,132 | INFO     | . initial setup = 9 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | . payload setup = 10 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | . stage-in = 0 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | . payload execution = 12664 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | . stage-out = 3 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | . log creation = 1 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,133 | INFO     | ..............................
[2026-03-14 17:33:27] 2026-03-14 16:32:25,264 | INFO     | 
[2026-03-14 17:33:27] 2026-03-14 16:32:25,264 | INFO     | job summary report
[2026-03-14 17:33:27] 2026-03-14 16:32:25,264 | INFO     | --------------------------------------------------
[2026-03-14 17:33:27] 2026-03-14 16:32:25,264 | INFO     | PanDA job id: 7045583226
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | task id: 48955010
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | errors: (none)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | pilot state: finished 
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | transexitcode: 0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | exeerrorcode: 0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | exeerrordiag: 
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | exitcode: 0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,265 | INFO     | exitmsg: OK
[2026-03-14 17:33:27] 2026-03-14 16:32:25,266 | INFO     | cpuconsumptiontime: 49309 s
[2026-03-14 17:33:27] 2026-03-14 16:32:25,266 | INFO     | nevents: 400
[2026-03-14 17:33:27] 2026-03-14 16:32:25,271 | INFO     | neventsw: 0
[2026-03-14 17:33:27] 2026-03-14 16:32:25,271 | INFO     | pid: 14697
[2026-03-14 17:33:27] 2026-03-14 16:32:25,271 | INFO     | pgrp: 14697
[2026-03-14 17:33:27] 2026-03-14 16:32:25,271 | INFO     | corecount: 8
[2026-03-14 17:33:27] 2026-03-14 16:32:25,271 | INFO     | event service: False
[2026-03-14 17:33:27] 2026-03-14 16:32:25,272 | INFO     | sizes: {0: 2279748, 1: 2280209, 12679: 2310103, 12683: 2319101, 12685: 2319157, 12688: 2319351}
[2026-03-14 17:33:27] 2026-03-14 16:32:25,272 | INFO     | --------------------------------------------------
[2026-03-14 17:33:27] 2026-03-14 16:32:25,272 | INFO     | 
[2026-03-14 17:33:27] 2026-03-14 16:32:25,272 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-14 17:33:27] 2026-03-14 16:32:25,693 | INFO     | time since job start (12690s) is within the limit (345600.0s)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,909 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,912 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:33:27] 2026-03-14 16:32:25,912 | INFO     | job 7045583226 has completed (purged errors)
[2026-03-14 17:33:27] 2026-03-14 16:32:25,912 | INFO     | overall cleanup function is called
[2026-03-14 17:33:27] 2026-03-14 16:32:26,921 | INFO     | --- collectZombieJob: --- 10, [14697]
[2026-03-14 17:33:27] 2026-03-14 16:32:26,921 | INFO     | zombie collector waiting for pid 14697
[2026-03-14 17:33:27] 2026-03-14 16:32:26,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:33:27] 2026-03-14 16:32:26,921 | INFO     | collected zombie processes
[2026-03-14 17:33:27] 2026-03-14 16:32:26,922 | INFO     | will attempt to kill all subprocesses of pid=14697
[2026-03-14 17:33:27] 2026-03-14 16:32:27,016 | INFO     | process IDs to be killed: [14697] (in reverse order)
[2026-03-14 17:33:27] 2026-03-14 16:32:28,073 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:33:27] 2026-03-14 16:32:28,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:33:27] 2026-03-14 16:32:28,075 | INFO     | did not find any defunct processes belonging to 14697
[2026-03-14 17:33:27] 2026-03-14 16:32:28,077 | INFO     | did not find any defunct processes belonging to 14697
[2026-03-14 17:33:27] 2026-03-14 16:32:28,077 | INFO     | ready for new job
[2026-03-14 17:33:27] 2026-03-14 16:32:28,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:33:27] 2026-03-14 16:32:28,079 | INFO     | **************************************
[2026-03-14 17:33:27] 2026-03-14 16:32:28,079 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:33:27] 2026-03-14 16:32:28,079 | INFO     | **************************************
[2026-03-14 17:33:27] 2026-03-14 16:32:28,080 | INFO     | 
[2026-03-14 17:33:27] 2026-03-14 16:32:28,080 | INFO     | pilot is running in a VM
[2026-03-14 17:33:27] 2026-03-14 16:32:28,080 | INFO     | architecture information:
[2026-03-14 17:33:27] 2026-03-14 16:32:28,081 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:33:27] 2026-03-14 16:32:28,411 | INFO     | cat /etc/os-release:
[2026-03-14 17:33:27] NAME="CentOS Linux"
[2026-03-14 17:33:27] VERSION="7 (Core)"
[2026-03-14 17:33:27] ID="centos"
[2026-03-14 17:33:27] ID_LIKE="rhel fedora"
[2026-03-14 17:33:27] VERSION_ID="7"
[2026-03-14 17:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:33:27] ANSI_COLOR="0;31"
[2026-03-14 17:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:33:27] HOME_URL="https://www.centos.org/"
[2026-03-14 17:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:33:27] 
[2026-03-14 17:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:33:27] 
[2026-03-14 17:33:27] 2026-03-14 16:32:28,412 | INFO     | **************************************
[2026-03-14 17:33:27] 2026-03-14 16:32:28,915 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-14 17:33:27] 2026-03-14 16:32:29,116 | INFO     | sufficient remaining disk space (496023633920 B)
[2026-03-14 17:33:27] 2026-03-14 16:32:29,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:33:27] 2026-03-14 16:32:29,116 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:33:27] 2026-03-14 16:32:29,116 | INFO     | update_server=False
[2026-03-14 17:33:27] 2026-03-14 16:32:29,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:33:27] 2026-03-14 16:32:29,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:33:27] 2026-03-14 16:32:29,139 | INFO     | all payload control threads have been joined
[2026-03-14 17:33:27] 2026-03-14 16:32:29,272 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 17:33:27] 2026-03-14 16:32:29,272 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 17:33:27] 2026-03-14 16:32:29,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:33:27] 2026-03-14 16:32:29,273 | INFO     | will abort loop
[2026-03-14 17:33:27] 2026-03-14 16:32:30,064 | INFO     | all job control threads have been joined
[2026-03-14 17:33:27] 2026-03-14 16:32:30,072 | INFO     | all data control threads have been joined
[2026-03-14 17:33:27] 2026-03-14 16:32:30,123 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,137 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,145 | INFO     | [payload] control thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,278 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:33:27] 2026-03-14 16:32:30,405 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:33:27] 2026-03-14 16:32:30,677 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,994 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:30,997 | INFO     | [job] validate thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,070 | INFO     | [job] control thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,078 | INFO     | [data] control thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,285 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,431 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:31,478 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:32,416 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:33,127 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:33:27] 2026-03-14 16:32:58,899 | INFO     | PID=10231 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 17:33:27] 2026-03-14 16:32:58,899 | INFO     | .. there are 2 such processes running
[2026-03-14 17:33:27] 2026-03-14 16:32:58,899 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:33:27] 2026-03-14 16:32:58,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:33:27] 2026-03-14 16:32:58,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:33:27] 2026-03-14 16:33:17,463 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:33:27] 2026-03-14 16:33:17,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575787964224)>', '<ExcThread(monitor, started 140575168763648)>']
[2026-03-14 17:33:27] 2026-03-14 16:33:18,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:33:27] 2026-03-14 16:33:18,015 | INFO     | [monitor] control thread has ended
[2026-03-14 17:33:27] 2026-03-14 16:33:22,974 | INFO     | all workflow threads have been joined
[2026-03-14 17:33:27] 2026-03-14 16:33:22,974 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:33:27] 2026-03-14 16:33:22,974 | INFO     | traces error code: 0
[2026-03-14 17:33:27] 2026-03-14 16:33:22,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:33:27] 2026-03-14 16:33:23,355 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:33:27] 2026-03-14 16:33:23,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:33:27] 2026-03-14 16:33:23,543 [wrapper] pilotpid: 10231
[2026-03-14 17:33:27] 2026-03-14 16:33:23,597 [wrapper] Pilot exit status: 0
[2026-03-14 17:33:27] 2026-03-14 16:33:24,089 [wrapper] pandaids: 7045583226
[2026-03-14 17:33:27] 2026-03-14 16:33:25,043 [wrapper] cleanup supervisor_pilot 20358 10232
[2026-03-14 17:33:27] 2026-03-14 16:33:25,109 [wrapper] Test setup, not cleaning
[2026-03-14 17:33:27] 2026-03-14 16:33:25,198 [wrapper] apfmon messages muted
[2026-03-14 17:33:27] 2026-03-14 16:33:25,272 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:33:27] 2026-03-14 16:33:25,361 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:33:27]  *** Error codes and diagnostics ***
[2026-03-14 17:33:27]     "exeErrorCode": 0,
[2026-03-14 17:33:27]     "exeErrorDiag": "",
[2026-03-14 17:33:27]     "pilotErrorCode": 0,
[2026-03-14 17:33:27]     "pilotErrorDiag": "",
[2026-03-14 17:33:27]  *** Listing of results directory ***
[2026-03-14 17:33:27] total 604928
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc    602624 Mar 10 17:47 pilot3.tar.gz
[2026-03-14 17:33:27] -rwx------. 1 boinc boinc     36322 Mar 14 02:52 runpilot2-wrapper.sh
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc      5111 Mar 14 02:55 queuedata.json
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc       100 Mar 14 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:33:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 14:00 run_atlas
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc       105 Mar 14 14:00 job.xml
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc      6391 Mar 14 14:00 init_data.xml
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc 435974143 Mar 14 14:00 EVNT.46701403._001734.pool.root.1
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 14:00 start_atlas.sh
[2026-03-14 17:33:27] drwxrwx--x. 2 boinc boinc        68 Mar 14 14:00 shared
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc    616304 Mar 14 14:00 input.tar.gz
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc         0 Mar 14 14:00 boinc_lockfile
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc      2564 Mar 14 14:00 pandaJob.out
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc   1004579 Mar 14 14:00 agis_schedconf.cvmfs.json
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc       415 Mar 14 14:00 workernode_map.json
[2026-03-14 17:33:27] drwx------. 7 boinc boinc      4096 Mar 14 14:00 pilot3
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc 174973093 Mar 14 17:30 HITS.48955010._037015.pool.root.1
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc       531 Mar 14 17:31 boinc_task_state.xml
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc      1010 Mar 14 17:32 memory_monitor_summary.json
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc        95 Mar 14 17:32 pilot_heartbeat.json
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc   1511579 Mar 14 17:32 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc    475943 Mar 14 17:32 log.48955010._037015.job.log.tgz.1
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc      6312 Mar 14 17:32 heartbeat.json
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc      8192 Mar 14 17:33 boinc_mmap_file
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc        28 Mar 14 17:33 wrapper_checkpoint.txt
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc      5066 Mar 14 17:33 pilotlog.txt
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc   1792268 Mar 14 17:33 log.48955010._037015.job.log.1
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc       357 Mar 14 17:33 output.list
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc       620 Mar 14 17:33 runtime_log
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc   2283520 Mar 14 17:33 result.tar.gz
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc      8816 Mar 14 17:33 runtime_log.err
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc       654 Mar 14 17:33 ADKLDmuLTL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmV0oLDmjT7KWm.diag
[2026-03-14 17:33:27] -rw-r--r--. 1 boinc boinc     20713 Mar 14 17:33 stderr.txt
[2026-03-14 17:33:27] HITS file was successfully produced:
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc 174973093 Mar 14 17:30 shared/HITS.pool.root.1
[2026-03-14 17:33:27]  *** Contents of shared directory: ***
[2026-03-14 17:33:27] total 599484
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc 435974143 Mar 14 14:00 ATLAS.root_0
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc     15845 Mar 14 14:00 start_atlas.sh
[2026-03-14 17:33:27] -rw-r--r--. 2 boinc boinc    616304 Mar 14 14:00 input.tar.gz
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc 174973093 Mar 14 17:30 HITS.pool.root.1
[2026-03-14 17:33:27] -rw-------. 1 boinc boinc   2283520 Mar 14 17:33 result.tar.gz
17:33:29 (6498): run_atlas exited; CPU time 49435.351504
17:33:29 (6498): called boinc_finish(0)

</stderr_txt>
]]>

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