Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:19:52 (271792): wrapper (7.7.26015): starting
18:19:52 (271792): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 18:19:52] Arguments: --nthreads 3
[2026-03-14 18:19:52] Threads: 3
[2026-03-14 18:19:52] Checking for CVMFS
[2026-03-14 18:19:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:19:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:19:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:19:53] 2.9.2.0 2962 1849 61248 157285 2 49 22563969 36864001 0 130560 0 758150 99.983 74719 13523 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 18:19:53] CVMFS is ok
[2026-03-14 18:19:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:19:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:19:53] Further information can be found at the LHC@home message board.
[2026-03-14 18:19:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:19:53] Checking for apptainer binary...
[2026-03-14 18:19:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:19:53] Running /usr/bin/apptainer --version
[2026-03-14 18:19:53] apptainer version 1.4.1-1.1
[2026-03-14 18:19:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:19:53] cosA121
[2026-03-14 18:19:53] apptainer works
[2026-03-14 18:19:53] Set ATHENA_PROC_NUMBER=3
[2026-03-14 18:19:53] Set ATHENA_CORE_NUMBER=3
[2026-03-14 18:19:53] Starting ATLAS job with PandaID=7045457846
[2026-03-14 18:19:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:46:23]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:46:23] 2026-03-14 18:45:38,615 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,616 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,617 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,617 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:46:23] 2026-03-14 18:45:38,623 | INFO     | [job] control thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,689 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,758 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:38,774 | INFO     | all payload control threads have been joined
[2026-03-14 19:46:23] 2026-03-14 18:45:38,983 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:39,103 | INFO     | [data] control thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:39,121 | INFO     | job.realtimelogging is not enabled
[2026-03-14 19:46:23] 2026-03-14 18:45:39,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:46:23] 2026-03-14 18:45:39,635 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:39,736 | INFO     | [job] validate thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:39,780 | INFO     | [payload] control thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:39,791 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:40,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:40,626 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:45:43,152 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:46:23] 2026-03-14 18:46:07,280 | INFO     | PID=275841 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 19:46:23] 2026-03-14 18:46:07,280 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:46:23] 2026-03-14 18:46:07,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:46:23] 2026-03-14 18:46:07,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:46:23] 2026-03-14 18:46:16,958 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:46:23] 2026-03-14 18:46:17,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698726344512)>', '<ExcThread(monitor, started 139698097874688)>']
[2026-03-14 19:46:23] 2026-03-14 18:46:18,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:46:23] 2026-03-14 18:46:18,335 | INFO     | [monitor] control thread has ended
[2026-03-14 19:46:23] 2026-03-14 18:46:22,990 | INFO     | all workflow threads have been joined
[2026-03-14 19:46:23] 2026-03-14 18:46:22,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:46:23] 2026-03-14 18:46:22,991 | INFO     | traces error code: 0
[2026-03-14 19:46:23] 2026-03-14 18:46:22,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:46:23] 2026-03-14 18:46:23,038 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:46:23] 2026-03-14 18:46:23,041 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:46:23] 2026-03-14 18:46:23,044 [wrapper] pilotpid: 275841
[2026-03-14 19:46:23] 2026-03-14 18:46:23,046 [wrapper] Pilot exit status: 0
[2026-03-14 19:46:23] 2026-03-14 18:46:23,054 [wrapper] pandaids: 7045457846
[2026-03-14 19:46:23] 2026-03-14 18:46:23,070 [wrapper] cleanup supervisor_pilot  285496 275842
[2026-03-14 19:46:23] 2026-03-14 18:46:23,073 [wrapper] Test setup, not cleaning
[2026-03-14 19:46:23] 2026-03-14 18:46:23,076 [wrapper] apfmon messages muted
[2026-03-14 19:46:23] 2026-03-14 18:46:23,079 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:46:23] 2026-03-14 18:46:23,081 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:46:23]  *** Error codes and diagnostics ***
[2026-03-14 19:46:23]     "exeErrorCode": 0,
[2026-03-14 19:46:23]     "exeErrorDiag": "",
[2026-03-14 19:46:23]     "pilotErrorCode": 0,
[2026-03-14 19:46:23]     "pilotErrorDiag": "",
[2026-03-14 19:46:23]  *** Listing of results directory ***
[2026-03-14 19:46:23] total 617660
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-14 19:46:23] -rwx------ 1 boinc boinc     36322 Mar 14 02:52 runpilot2-wrapper.sh
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      5111 Mar 14 02:55 queuedata.json
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc       100 Mar 14 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:46:23] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 18:19 run_atlas
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc       105 Mar 14 18:19 job.xml
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc 440686102 Mar 14 18:19 EVNT.46701403._001732.pool.root.1
[2026-03-14 19:46:23] drwxrwx--x 2 boinc boinc      4096 Mar 14 18:19 shared
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc    597531 Mar 14 18:19 input.tar.gz
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:19 start_atlas.sh
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:19 boinc_setup_complete
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      6197 Mar 14 18:19 init_data.xml
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:19 boinc_lockfile
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      2563 Mar 14 18:19 pandaJob.out
[2026-03-14 19:46:23] -rw------- 1 boinc boinc   1005897 Mar 14 18:20 agis_schedconf.cvmfs.json
[2026-03-14 19:46:23] -rw------- 1 boinc boinc   1511579 Mar 14 18:20 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:46:23] -rw------- 1 boinc boinc       428 Mar 14 18:20 workernode_map.json
[2026-03-14 19:46:23] drwx------ 5 boinc boinc      4096 Mar 14 18:20 pilot3
[2026-03-14 19:46:23] -rw------- 1 boinc boinc 185864276 Mar 14 19:45 HITS.48955010._036867.pool.root.1
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc       530 Mar 14 19:45 boinc_task_state.xml
[2026-03-14 19:46:23] -rw------- 1 boinc boinc        95 Mar 14 19:45 pilot_heartbeat.json
[2026-03-14 19:46:23] -rw------- 1 boinc boinc      1016 Mar 14 19:45 memory_monitor_summary.json
[2026-03-14 19:46:23] -rw------- 1 boinc boinc    260961 Mar 14 19:45 log.48955010._036867.job.log.tgz.1
[2026-03-14 19:46:23] -rw------- 1 boinc boinc      6314 Mar 14 19:45 heartbeat.json
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      8192 Mar 14 19:45 boinc_mmap_file
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc        27 Mar 14 19:45 wrapper_checkpoint.txt
[2026-03-14 19:46:23] -rw------- 1 boinc boinc      4819 Mar 14 19:46 pilotlog.txt
[2026-03-14 19:46:23] -rw------- 1 boinc boinc    749281 Mar 14 19:46 log.48955010._036867.job.log.1
[2026-03-14 19:46:23] -rw------- 1 boinc boinc       357 Mar 14 19:46 output.list
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc       620 Mar 14 19:46 runtime_log
[2026-03-14 19:46:23] -rw------- 1 boinc boinc   1024000 Mar 14 19:46 result.tar.gz
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      8901 Mar 14 19:46 runtime_log.err
[2026-03-14 19:46:23] -rw------- 1 boinc boinc       658 Mar 14 19:46 49VMDmtLTL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmhzoLDmuUx89n.diag
[2026-03-14 19:46:23] -rw-r--r-- 1 boinc boinc      6752 Mar 14 19:46 stderr.txt
[2026-03-14 19:46:23] HITS file was successfully produced:
[2026-03-14 19:46:23] -rw------- 1 boinc boinc 185864276 Mar 14 19:45 shared/HITS.pool.root.1
[2026-03-14 19:46:23]  *** Contents of shared directory: ***
[2026-03-14 19:46:23] total 613476
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc 440686102 Mar 14 18:19 ATLAS.root_0
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc    597531 Mar 14 18:19 input.tar.gz
[2026-03-14 19:46:23] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:19 start_atlas.sh
[2026-03-14 19:46:23] -rw------- 1 boinc boinc 185864276 Mar 14 19:45 HITS.pool.root.1
[2026-03-14 19:46:23] -rw------- 1 boinc boinc   1024000 Mar 14 19:46 result.tar.gz
19:46:24 (271792): run_atlas exited; CPU time 14424.139142
19:46:24 (271792): called boinc_finish(0)

</stderr_txt>
]]>

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