Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:12:08 (900602): wrapper (7.7.26015): starting
18:12:08 (900602): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 18:12:08] Arguments: --nthreads 3
[2026-03-14 18:12:08] Threads: 3
[2026-03-14 18:12:08] Checking for CVMFS
[2026-03-14 18:12:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 18:12:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 18:12:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 18:12:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 18:12:09] 2.9.2.0 5444 5738 82768 157284 2 50 32776134 36864000 0 130560 0 2519658 99.984 218602 15237 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 18:12:09] CVMFS is ok
[2026-03-14 18:12:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 18:12:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 18:12:09] Further information can be found at the LHC@home message board.
[2026-03-14 18:12:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 18:12:09] Checking for apptainer binary...
[2026-03-14 18:12:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 18:12:09] Running /usr/bin/apptainer --version
[2026-03-14 18:12:09] apptainer version 1.4.1-1.1
[2026-03-14 18:12:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 18:12:09] magicA161a
[2026-03-14 18:12:09] apptainer works
[2026-03-14 18:12:09] Set ATHENA_PROC_NUMBER=3
[2026-03-14 18:12:09] Set ATHENA_CORE_NUMBER=3
[2026-03-14 18:12:09] Starting ATLAS job with PandaID=7045583057
[2026-03-14 18:12:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:31:30]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 19:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 19:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 19:31:30] 
[2026-03-14 19:31:30] 2026-03-14 18:30:36,386 | INFO     | **************************************
[2026-03-14 19:31:30] 2026-03-14 18:30:36,889 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | INFO     | sufficient remaining disk space (369826463744 B)
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | INFO     | update_server=False
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 19:31:30] 2026-03-14 18:30:36,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:31:30] 2026-03-14 18:30:37,066 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 19:31:30] 2026-03-14 18:30:37,066 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 19:31:30] 2026-03-14 18:30:37,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:31:30] 2026-03-14 18:30:37,066 | INFO     | will abort loop
[2026-03-14 19:31:30] 2026-03-14 18:30:37,430 | INFO     | all job control threads have been joined
[2026-03-14 19:31:30] 2026-03-14 18:30:37,822 | INFO     | all data control threads have been joined
[2026-03-14 19:31:30] 2026-03-14 18:30:37,828 | INFO     | all payload control threads have been joined
[2026-03-14 19:31:30] 2026-03-14 18:30:37,909 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:37,909 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,072 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,129 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,213 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:31:30] 2026-03-14 18:30:38,365 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,436 | INFO     | [job] control thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,639 | INFO     | [job] validate thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,717 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,791 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,828 | INFO     | [data] control thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,831 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,834 | INFO     | [payload] control thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:38,888 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:39,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:31:30] 2026-03-14 18:30:40,371 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:30:43,027 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:31:30] 2026-03-14 18:31:07,063 | INFO     | PID=904644 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 19:31:30] 2026-03-14 18:31:07,063 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:31:30] 2026-03-14 18:31:07,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:31:30] 2026-03-14 18:31:07,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:31:30] 2026-03-14 18:31:24,212 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:31:30] 2026-03-14 18:31:25,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189353678656)>', '<ExcThread(monitor, started 140188864997120)>']
[2026-03-14 19:31:30] 2026-03-14 18:31:26,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:31:30] 2026-03-14 18:31:26,165 | INFO     | [monitor] control thread has ended
[2026-03-14 19:31:30] 2026-03-14 18:31:30,688 | INFO     | all workflow threads have been joined
[2026-03-14 19:31:30] 2026-03-14 18:31:30,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:31:30] 2026-03-14 18:31:30,688 | INFO     | traces error code: 0
[2026-03-14 19:31:30] 2026-03-14 18:31:30,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:31:30] 2026-03-14 18:31:30,738 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:31:30] 2026-03-14 18:31:30,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:31:30] 2026-03-14 18:31:30,742 [wrapper] pilotpid: 904644
[2026-03-14 19:31:30] 2026-03-14 18:31:30,745 [wrapper] Pilot exit status: 0
[2026-03-14 19:31:30] 2026-03-14 18:31:30,752 [wrapper] pandaids: 7045583057
[2026-03-14 19:31:30] 2026-03-14 18:31:30,768 [wrapper] cleanup supervisor_pilot  914211 904645
[2026-03-14 19:31:30] 2026-03-14 18:31:30,771 [wrapper] Test setup, not cleaning
[2026-03-14 19:31:30] 2026-03-14 18:31:30,773 [wrapper] apfmon messages muted
[2026-03-14 19:31:30] 2026-03-14 18:31:30,775 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:31:30] 2026-03-14 18:31:30,778 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:31:30]  *** Error codes and diagnostics ***
[2026-03-14 19:31:30]     "exeErrorCode": 0,
[2026-03-14 19:31:30]     "exeErrorDiag": "",
[2026-03-14 19:31:30]     "pilotErrorCode": 0,
[2026-03-14 19:31:30]     "pilotErrorDiag": "",
[2026-03-14 19:31:30]  *** Listing of results directory ***
[2026-03-14 19:31:30] total 617536
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-14 19:31:30] -rwx------ 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      5111 Mar 14 02:50 queuedata.json
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc       100 Mar 14 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:31:30] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 18:12 run_atlas
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc       105 Mar 14 18:12 job.xml
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc 437291290 Mar 14 18:12 EVNT.46701403._002503.pool.root.1
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc    597535 Mar 14 18:12 input.tar.gz
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:12 start_atlas.sh
[2026-03-14 19:31:30] drwxrwx--x 2 boinc boinc      4096 Mar 14 18:12 shared
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:12 boinc_setup_complete
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      6449 Mar 14 18:12 init_data.xml
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc         0 Mar 14 18:12 boinc_lockfile
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      2571 Mar 14 18:12 pandaJob.out
[2026-03-14 19:31:30] -rw------- 1 boinc boinc   1004579 Mar 14 18:12 agis_schedconf.cvmfs.json
[2026-03-14 19:31:30] -rw------- 1 boinc boinc   1511579 Mar 14 18:12 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:31:30] -rw------- 1 boinc boinc       427 Mar 14 18:12 workernode_map.json
[2026-03-14 19:31:30] drwx------ 5 boinc boinc      4096 Mar 14 18:12 pilot3
[2026-03-14 19:31:30] -rw------- 1 boinc boinc 189230558 Mar 14 19:30 HITS.48955015._022268.pool.root.1
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc       530 Mar 14 19:30 boinc_task_state.xml
[2026-03-14 19:31:30] -rw------- 1 boinc boinc      1027 Mar 14 19:30 memory_monitor_summary.json
[2026-03-14 19:31:30] -rw------- 1 boinc boinc    265850 Mar 14 19:30 log.48955015._022268.job.log.tgz.1
[2026-03-14 19:31:30] -rw------- 1 boinc boinc      6306 Mar 14 19:30 heartbeat.json
[2026-03-14 19:31:30] -rw------- 1 boinc boinc        95 Mar 14 19:31 pilot_heartbeat.json
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc        27 Mar 14 19:31 wrapper_checkpoint.txt
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      8192 Mar 14 19:31 boinc_mmap_file
[2026-03-14 19:31:30] -rw------- 1 boinc boinc      4933 Mar 14 19:31 pilotlog.txt
[2026-03-14 19:31:30] -rw------- 1 boinc boinc    690646 Mar 14 19:31 log.48955015._022268.job.log.1
[2026-03-14 19:31:30] -rw------- 1 boinc boinc       357 Mar 14 19:31 output.list
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc       620 Mar 14 19:31 runtime_log
[2026-03-14 19:31:30] -rw------- 1 boinc boinc    972800 Mar 14 19:31 result.tar.gz
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      8916 Mar 14 19:31 runtime_log.err
[2026-03-14 19:31:30] -rw------- 1 boinc boinc       661 Mar 14 19:31 pwUMDmSJTL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm8woLDmDGFYFm.diag
[2026-03-14 19:31:30] -rw-r--r-- 1 boinc boinc      8381 Mar 14 19:31 stderr.txt
[2026-03-14 19:31:30] HITS file was successfully produced:
[2026-03-14 19:31:30] -rw------- 1 boinc boinc 189230558 Mar 14 19:30 shared/HITS.pool.root.1
[2026-03-14 19:31:30]  *** Contents of shared directory: ***
[2026-03-14 19:31:30] total 613400
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc 437291290 Mar 14 18:12 ATLAS.root_0
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc    597535 Mar 14 18:12 input.tar.gz
[2026-03-14 19:31:30] -rw-r--r-- 2 boinc boinc     15845 Mar 14 18:12 start_atlas.sh
[2026-03-14 19:31:30] -rw------- 1 boinc boinc 189230558 Mar 14 19:30 HITS.pool.root.1
[2026-03-14 19:31:30] -rw------- 1 boinc boinc    972800 Mar 14 19:31 result.tar.gz
19:31:32 (900602): run_atlas exited; CPU time 13204.707236
19:31:32 (900602): called boinc_finish(0)

</stderr_txt>
]]>

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