Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:42:13 (2023849): wrapper (7.7.26015): starting
07:42:13 (2023849): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 07:42:13] Arguments: --nthreads 4
[2026-03-15 07:42:13] Threads: 4
[2026-03-15 07:42:13] Checking for CVMFS
[2026-03-15 07:42:13] No cvmfs_config command found, will try listing directly
[2026-03-15 07:42:13] CVMFS is ok
[2026-03-15 07:42:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 07:42:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 07:42:13] Further information can be found at the LHC@home message board.
[2026-03-15 07:42:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 07:42:13] Checking for apptainer binary...
[2026-03-15 07:42:13] which: no apptainer in ((null))
[2026-03-15 07:42:13] apptainer is not installed, using version from CVMFS
[2026-03-15 07:42:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:42:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-15 07:42:13] apptainer works
[2026-03-15 07:42:13] Set ATHENA_PROC_NUMBER=4
[2026-03-15 07:42:13] Set ATHENA_CORE_NUMBER=4
[2026-03-15 07:42:13] Starting ATLAS job with PandaID=7045583319
[2026-03-15 07:42:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 08:59:39]  *** The last 200 lines of the pilot log: ***
[2026-03-15 08:59:39]  mtime=0
[2026-03-15 08:59:39]  protocol_id=None
[2026-03-15 08:59:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 08:59:39]  replicas=None
[2026-03-15 08:59:39]  scope=mc23_13p6TeV
[2026-03-15 08:59:39]  status=None
[2026-03-15 08:59:39]  status_code=0
[2026-03-15 08:59:39]  storage_token=
[2026-03-15 08:59:39]  surl=/var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/log.48955010._037108.job.log.tgz.1
[2026-03-15 08:59:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/13/log.48955010._037108.job.log.tgz.1
[2026-03-15 08:59:39]  workdir=None
[2026-03-15 08:59:39] ]
[2026-03-15 08:59:39] 2026-03-15 07:58:36,850 | INFO     | transferring file log.48955010._037108.job.log.tgz.1 from /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/log.48955010._037108.job.log.tgz.1 to /var/lib/
[2026-03-15 08:59:39] 2026-03-15 07:58:36,850 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/log.48955010._037108.job.log.tgz.1 /var/lib/boinc/var/slot188/slots/0/
[2026-03-15 08:59:39] 2026-03-15 07:58:36,865 | INFO     | adding to output.list: log.48955010._037108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/13/log.48955010._037108.job.log.tg
[2026-03-15 08:59:39] 2026-03-15 07:58:36,866 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 08:59:39] 2026-03-15 07:58:36,866 | INFO     | summary of transferred files:
[2026-03-15 08:59:39] 2026-03-15 07:58:36,866 | INFO     |  -- lfn=log.48955010._037108.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 08:59:39] 2026-03-15 07:58:36,866 | INFO     | stage-out finished correctly
[2026-03-15 08:59:39] 2026-03-15 07:58:38,054 | INFO     | time since job start (4573s) is within the limit (345600.0s)
[2026-03-15 08:59:39] 2026-03-15 07:58:38,217 | WARNING  | process 2034313 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 08:59:39] 2026-03-15 07:58:38,217 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:59:39] 2026-03-15 07:58:38,218 | INFO     | reaping zombies for max 20 seconds
[2026-03-15 08:59:39] 2026-03-15 07:58:38,227 | INFO     | checking for looping job (in state=finished)
[2026-03-15 08:59:39] 2026-03-15 07:58:38,228 | INFO     | using looping job limit: 7200 s
[2026-03-15 08:59:39] 2026-03-15 07:58:38,686 | INFO     | number of running child processes to parent process 2034313: 1
[2026-03-15 08:59:39] 2026-03-15 07:58:38,686 | INFO     | maximum number of monitored processes: 6
[2026-03-15 08:59:39] 2026-03-15 07:58:40,060 | INFO     | time since job start (4575s) is within the limit (345600.0s)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,390 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 08:59:39] 2026-03-15 07:58:40,445 | INFO     | job 7045583319 has state=finished
[2026-03-15 08:59:39] 2026-03-15 07:58:40,445 | INFO     | preparing for final server update for job 7045583319 in state='finished'
[2026-03-15 08:59:39] 2026-03-15 07:58:40,446 | INFO     | reading metadata from: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/jobReport.json
[2026-03-15 08:59:39] 2026-03-15 07:58:40,447 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot188/slots/0/workernode_map.json
[2026-03-15 08:59:39] 2026-03-15 07:58:40,447 | INFO     | this job has now completed (state=finished)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,448 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,448 | INFO     | log transfer has been attempted: DONE
[2026-03-15 08:59:39] 2026-03-15 07:58:40,448 | INFO     | job 7045583319 has finished - writing final server update
[2026-03-15 08:59:39] 2026-03-15 07:58:40,448 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_229223/.job.ad'
[2026-03-15 08:59:39] 2026-03-15 07:58:40,448 | INFO     | total number of processed events: 400 (read)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,466 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7045583319/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,466 | INFO     | extracted standard info from prmon json
[2026-03-15 08:59:39] 2026-03-15 07:58:40,466 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 08:59:39] 2026-03-15 07:58:40,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 08:59:39] 2026-03-15 07:58:40,467 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 08:59:39] 2026-03-15 07:58:40,467 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | fitting pss+swap vs Time
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | sum of square deviations: 97479037.0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | sum of deviations: 213229434.50000003
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | mean x: 1773559313.5
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | mean y: 2330863.838235294
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | intersect: -3877221715.9622126
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | chi2: 0.0002632518578375658
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | current memory leak: 2.19 B/s (using 68 data points, chi2=0.00)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,468 | INFO     | could have reported an average CPU frequency of 3610 MHz (6 samples)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | ..............................
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . Timing measurements:
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . get job = 0 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . initial setup = 4 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . payload setup = 4 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . stage-in = 0 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . payload execution = 4551 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . stage-out = 0 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | . log creation = 0 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,469 | INFO     | ..............................
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | 
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | job summary report
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | --------------------------------------------------
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | PanDA job id: 7045583319
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | task id: 48955010
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | errors: (none)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | pilot state: finished 
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | transexitcode: 0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | exeerrorcode: 0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | exeerrordiag: 
[2026-03-15 08:59:39] 2026-03-15 07:58:40,519 | INFO     | exitcode: 0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | exitmsg: OK
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | cpuconsumptiontime: 17470 s
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | nevents: 400
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | neventsw: 0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | pid: 2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | pgrp: 2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | corecount: 4
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | event service: False
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | sizes: {0: 2279931, 1: 2280193, 11: 2280221, 4560: 2306452, 4561: 2315474, 4564: 2315852}
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | --------------------------------------------------
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | 
[2026-03-15 08:59:39] 2026-03-15 07:58:40,520 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot188/slots/0
[2026-03-15 08:59:39] 2026-03-15 07:58:40,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | job 7045583319 has completed (purged errors)
[2026-03-15 08:59:39] 2026-03-15 07:58:40,539 | INFO     | overall cleanup function is called
[2026-03-15 08:59:39] 2026-03-15 07:58:41,545 | INFO     | --- collectZombieJob: --- 10, [2034313]
[2026-03-15 08:59:39] 2026-03-15 07:58:41,546 | INFO     | zombie collector waiting for pid 2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:41,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 08:59:39] 2026-03-15 07:58:41,546 | INFO     | collected zombie processes
[2026-03-15 08:59:39] 2026-03-15 07:58:41,546 | INFO     | will attempt to kill all subprocesses of pid=2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:41,996 | INFO     | process IDs to be killed: [2034313] (in reverse order)
[2026-03-15 08:59:39] 2026-03-15 07:58:42,207 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 08:59:39] 2026-03-15 07:58:42,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 08:59:39] 2026-03-15 07:58:42,234 | INFO     | did not find any defunct processes belonging to 2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:42,263 | INFO     | did not find any defunct processes belonging to 2034313
[2026-03-15 08:59:39] 2026-03-15 07:58:42,263 | INFO     | ready for new job
[2026-03-15 08:59:39] 2026-03-15 07:58:42,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 08:59:39] 2026-03-15 07:58:42,264 | INFO     | **************************************
[2026-03-15 08:59:39] 2026-03-15 07:58:42,264 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 08:59:39] 2026-03-15 07:58:42,264 | INFO     | **************************************
[2026-03-15 08:59:39] 2026-03-15 07:58:42,264 | INFO     | 
[2026-03-15 08:59:39] 2026-03-15 07:58:42,271 | INFO     | architecture information:
[2026-03-15 08:59:39] 2026-03-15 07:58:42,271 | INFO     | executing command: cat /etc/os-release
[2026-03-15 08:59:39] 2026-03-15 07:58:42,284 | INFO     | cat /etc/os-release:
[2026-03-15 08:59:39] NAME="CentOS Linux"
[2026-03-15 08:59:39] VERSION="7 (Core)"
[2026-03-15 08:59:39] ID="centos"
[2026-03-15 08:59:39] ID_LIKE="rhel fedora"
[2026-03-15 08:59:39] VERSION_ID="7"
[2026-03-15 08:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 08:59:39] ANSI_COLOR="0;31"
[2026-03-15 08:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 08:59:39] HOME_URL="https://www.centos.org/"
[2026-03-15 08:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 08:59:39] 
[2026-03-15 08:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 08:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 08:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 08:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 08:59:39] 
[2026-03-15 08:59:39] 2026-03-15 07:58:42,284 | INFO     | **************************************
[2026-03-15 08:59:39] 2026-03-15 07:58:42,787 | INFO     | executing command: df -mP /var/lib/boinc/var/slot188/slots/0
[2026-03-15 08:59:39] 2026-03-15 07:58:42,801 | INFO     | sufficient remaining disk space (73660366848 B)
[2026-03-15 08:59:39] 2026-03-15 07:58:42,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 08:59:39] 2026-03-15 07:58:42,801 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | INFO     | update_server=False
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | INFO     | aborting loop
[2026-03-15 08:59:39] 2026-03-15 07:58:42,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 08:59:39] 2026-03-15 07:58:43,751 | INFO     | all data control threads have been joined
[2026-03-15 08:59:39] 2026-03-15 07:58:43,806 | INFO     | [job] retrieve thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:43,808 | INFO     | [job] job monitor thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,022 | INFO     | [job] validate thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,087 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,205 | INFO     | all payload control threads have been joined
[2026-03-15 08:59:39] 2026-03-15 07:58:44,231 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,290 | INFO     | [payload] failed_post thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,304 | INFO     | all job control threads have been joined
[2026-03-15 08:59:39] 2026-03-15 07:58:44,540 | INFO     | [data] copytool_in thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,754 | INFO     | [data] control thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,807 | INFO     | [data] copytool_out thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:44,833 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:45,210 | INFO     | [payload] control thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:45,309 | INFO     | [job] control thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:45,375 | INFO     | [payload] validate_post thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:45,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 08:59:39] 2026-03-15 07:58:46,532 | INFO     | [job] queue monitor thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:46,807 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:58:53,083 | INFO     | job.realtimelogging is not enabled
[2026-03-15 08:59:39] 2026-03-15 07:58:54,088 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 08:59:39] 2026-03-15 07:59:13,700 | INFO     | PID=2028427 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 08:59:39] 2026-03-15 07:59:13,700 | INFO     | .. there are 45 such processes running
[2026-03-15 08:59:39] 2026-03-15 07:59:13,701 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 08:59:39] 2026-03-15 07:59:13,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 08:59:39] 2026-03-15 07:59:13,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 08:59:39] 2026-03-15 07:59:32,540 | INFO     | [monitor] cgroup control has ended
[2026-03-15 08:59:39] 2026-03-15 07:59:34,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23299155830592)>', '<ExcThread(monitor, started 23298846996224)>']
[2026-03-15 08:59:39] 2026-03-15 07:59:34,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 08:59:39] 2026-03-15 07:59:34,792 | INFO     | [monitor] control thread has ended
[2026-03-15 08:59:39] 2026-03-15 07:59:39,256 | INFO     | all workflow threads have been joined
[2026-03-15 08:59:39] 2026-03-15 07:59:39,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 08:59:39] 2026-03-15 07:59:39,257 | INFO     | traces error code: 0
[2026-03-15 08:59:39] 2026-03-15 07:59:39,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 08:59:39] 2026-03-15 07:59:39,469 [wrapper] ==== pilot stdout END ====
[2026-03-15 08:59:39] 2026-03-15 07:59:39,471 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 08:59:39] 2026-03-15 07:59:39,474 [wrapper] pilotpid: 2028427
[2026-03-15 08:59:39] 2026-03-15 07:59:39,476 [wrapper] Pilot exit status: 0
[2026-03-15 08:59:39] 2026-03-15 07:59:39,485 [wrapper] pandaids: 7045583319
[2026-03-15 08:59:39] 2026-03-15 07:59:39,616 [wrapper] cleanup supervisor_pilot 2736656 2028428
[2026-03-15 08:59:39] 2026-03-15 07:59:39,619 [wrapper] Test setup, not cleaning
[2026-03-15 08:59:39] 2026-03-15 07:59:39,622 [wrapper] apfmon messages muted
[2026-03-15 08:59:39] 2026-03-15 07:59:39,624 [wrapper] ==== wrapper stdout END ====
[2026-03-15 08:59:39] 2026-03-15 07:59:39,626 [wrapper] ==== wrapper stderr END ====
[2026-03-15 08:59:39]  *** Error codes and diagnostics ***
[2026-03-15 08:59:39]     "exeErrorCode": 0,
[2026-03-15 08:59:39]     "exeErrorDiag": "",
[2026-03-15 08:59:39]     "pilotErrorCode": 0,
[2026-03-15 08:59:39]     "pilotErrorDiag": "",
[2026-03-15 08:59:39]  *** Listing of results directory ***
[2026-03-15 08:59:39] total 615648
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-15 08:59:39] -rwx------. 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc      5111 Mar 14 02:49 queuedata.json
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc       100 Mar 15 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 08:59:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 07:42 run_atlas
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc       105 Mar 15 07:42 job.xml
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc      6708 Mar 15 07:42 init_data.xml
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc 443817686 Mar 15 07:42 EVNT.46701403._001764.pool.root.1
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:42 start_atlas.sh
[2026-03-15 08:59:39] drwxrwx--x. 2 boinc boinc      4096 Mar 15 07:42 shared
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:42 input.tar.gz
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc         0 Mar 15 07:42 boinc_lockfile
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc      2564 Mar 15 07:42 pandaJob.out
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc   1006481 Mar 15 07:42 agis_schedconf.cvmfs.json
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc   1511579 Mar 15 07:42 agis_ddmendpoints.agis.ALL.json
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc       443 Mar 15 07:42 workernode_map.json
[2026-03-15 08:59:39] drwx------. 5 boinc boinc      4096 Mar 15 07:42 pilot3
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc 180738663 Mar 15 08:58 HITS.48955010._037108.pool.root.1
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc       530 Mar 15 08:58 boinc_task_state.xml
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc      1029 Mar 15 08:58 memory_monitor_summary.json
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc    294652 Mar 15 08:58 log.48955010._037108.job.log.tgz.1
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc      6355 Mar 15 08:58 heartbeat.json
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc        95 Mar 15 08:59 pilot_heartbeat.json
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc      8192 Mar 15 08:59 boinc_mmap_file
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc        27 Mar 15 08:59 wrapper_checkpoint.txt
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc      4902 Mar 15 08:59 pilotlog.txt
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc    673769 Mar 15 08:59 log.48955010._037108.job.log.1
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc       357 Mar 15 08:59 output.list
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc       620 Mar 15 08:59 runtime_log
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc    983040 Mar 15 08:59 result.tar.gz
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc      9221 Mar 15 08:59 runtime_log.err
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc       663 Mar 15 08:59 0qfLDm9ITL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmJuoLDmrNPN1n.diag
[2026-03-15 08:59:39] -rw-r--r--. 1 boinc boinc     21519 Mar 15 08:59 stderr.txt
[2026-03-15 08:59:39] HITS file was successfully produced:
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc 180738663 Mar 15 08:58 shared/HITS.pool.root.1
[2026-03-15 08:59:39]  *** Contents of shared directory: ***
[2026-03-15 08:59:39] total 611488
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc 443817686 Mar 15 07:42 ATLAS.root_0
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar 15 07:42 start_atlas.sh
[2026-03-15 08:59:39] -rw-r--r--. 2 boinc boinc    597531 Mar 15 07:42 input.tar.gz
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc 180738663 Mar 15 08:58 HITS.pool.root.1
[2026-03-15 08:59:39] -rw-------. 1 boinc boinc    983040 Mar 15 08:59 result.tar.gz
08:59:41 (2023849): run_atlas exited; CPU time 17684.720440
08:59:41 (2023849): called boinc_finish(0)

</stderr_txt>
]]>

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