Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:32:47 (30006): wrapper (7.7.26015): starting
16:32:47 (30006): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 16:32:47] Arguments: --nthreads 8
[2026-03-14 16:32:47] Threads: 8
[2026-03-14 16:32:47] Checking for CVMFS
[2026-03-14 16:32:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 16:32:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 16:32:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 16:32:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 16:32:53] 2.11.2.0 16892 127749 136716 157282 1 54 23523053 25165824 96 130560 151 40044567 99.788 33168650 1114 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 16:32:53] CVMFS is ok
[2026-03-14 16:32:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:32:53] Checking for apptainer binary...
[2026-03-14 16:32:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 16:32:53] Running /usr/bin/apptainer --version
[2026-03-14 16:32:53] apptainer version 1.3.2-1.el7
[2026-03-14 16:32:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:33:06] cg-vwn499.simple-grid.lan
[2026-03-14 16:33:06] apptainer works
[2026-03-14 16:33:06] Set ATHENA_PROC_NUMBER=8
[2026-03-14 16:33:06] Set ATHENA_CORE_NUMBER=8
[2026-03-14 16:33:07] Starting ATLAS job with PandaID=7045457941
[2026-03-14 16:33:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 19:41:41]  *** The last 200 lines of the pilot log: ***
[2026-03-14 19:41:41] 2026-03-14 18:40:39,408 | INFO     | log transfer has been attempted: DONE
[2026-03-14 19:41:41] 2026-03-14 18:40:39,408 | INFO     | job 7045457941 has finished - writing final server update
[2026-03-14 19:41:41] 2026-03-14 18:40:39,409 | INFO     | total number of processed events: 400 (read)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,411 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7045457941/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,411 | INFO     | extracted standard info from prmon json
[2026-03-14 19:41:41] 2026-03-14 18:40:39,411 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 19:41:41] 2026-03-14 18:40:39,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 19:41:41] 2026-03-14 18:40:39,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 19:41:41] 2026-03-14 18:40:39,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 19:41:41] 2026-03-14 18:40:39,416 | INFO     | fitting pss+swap vs Time
[2026-03-14 19:41:41] 2026-03-14 18:40:39,416 | INFO     | sum of square deviations: 1633472487.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,417 | INFO     | sum of deviations: 82292333375.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,418 | INFO     | mean x: 1773508320.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,418 | INFO     | mean y: 2387611.8448275863
[2026-03-14 19:41:41] 2026-03-14 18:40:39,418 | INFO     | intersect: -89344778668.36415
[2026-03-14 19:41:41] 2026-03-14 18:40:39,418 | INFO     | chi2: 9.44485169922028
[2026-03-14 19:41:41] 2026-03-14 18:40:39,419 | INFO     | sum of square deviations: 1496660620.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,420 | INFO     | sum of deviations: 91192313743.00002
[2026-03-14 19:41:41] 2026-03-14 18:40:39,420 | INFO     | mean x: 1773508168.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,420 | INFO     | mean y: 2397233.905325444
[2026-03-14 19:41:41] 2026-03-14 18:40:39,420 | INFO     | intersect: -108058382291.40161
[2026-03-14 19:41:41] 2026-03-14 18:40:39,421 | INFO     | chi2: 8.798504685452112
[2026-03-14 19:41:41] 2026-03-14 18:40:39,421 | INFO     | current chi2=8.798504685452112 (change=6.843379169431815 %)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,421 | INFO     | right removable region: 168
[2026-03-14 19:41:41] 2026-03-14 18:40:39,421 | INFO     | sum of square deviations: 1496660620.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,422 | INFO     | sum of deviations: 22493900914.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,423 | INFO     | mean x: 1773508473.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,423 | INFO     | mean y: 2454218.171597633
[2026-03-14 19:41:41] 2026-03-14 18:40:39,423 | INFO     | intersect: -26652301929.418793
[2026-03-14 19:41:41] 2026-03-14 18:40:39,423 | INFO     | chi2: 4.004271991150742
[2026-03-14 19:41:41] 2026-03-14 18:40:39,423 | INFO     | current chi2=4.004271991150742 (change=57.60365415286176 %)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,424 | INFO     | sum of square deviations: 1367709365.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,425 | INFO     | sum of deviations: -23512097511.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,425 | INFO     | mean x: 1773508625.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,425 | INFO     | mean y: 2508537.31097561
[2026-03-14 19:41:41] 2026-03-14 18:40:39,425 | INFO     | intersect: 30490643522.21863
[2026-03-14 19:41:41] 2026-03-14 18:40:39,425 | INFO     | chi2: 1.0907859858377702
[2026-03-14 19:41:41] 2026-03-14 18:40:39,426 | INFO     | current chi2=1.0907859858377702 (change=72.75944320844445 %)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,426 | INFO     | sum of square deviations: 1246386160.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,430 | INFO     | sum of deviations: -30199842119.000008
[2026-03-14 19:41:41] 2026-03-14 18:40:39,430 | INFO     | mean x: 1773508778.0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,430 | INFO     | mean y: 2516771.0503144655
[2026-03-14 19:41:41] 2026-03-14 18:40:39,431 | INFO     | intersect: 42974499942.18938
[2026-03-14 19:41:41] 2026-03-14 18:40:39,431 | INFO     | chi2: 0.9209002949333235
[2026-03-14 19:41:41] 2026-03-14 18:40:39,431 | INFO     | current chi2=0.9209002949333235 (change=15.574612537212538 %)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,431 | INFO     | left removable region: 30
[2026-03-14 19:41:41] 2026-03-14 18:40:39,431 | INFO     | sum of square deviations: 814878534.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,432 | INFO     | sum of deviations: -3033518348.9999995
[2026-03-14 19:41:41] 2026-03-14 18:40:39,432 | INFO     | mean x: 1773509052.5
[2026-03-14 19:41:41] 2026-03-14 18:40:39,433 | INFO     | mean y: 2507137.0579710146
[2026-03-14 19:41:41] 2026-03-14 18:40:39,433 | INFO     | intersect: 6604684056.80889
[2026-03-14 19:41:41] 2026-03-14 18:40:39,433 | INFO     | chi2: 0.04644156237324885
[2026-03-14 19:41:41] 2026-03-14 18:40:39,433 | INFO     | current memory leak: -3.72 B/s (using 138 data points, chi2=0.05)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | ..............................
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . Timing measurements:
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . get job = 0 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . initial setup = 123 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . payload setup = 151 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . stage-in = 0 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,434 | INFO     | . payload execution = 10710 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,435 | INFO     | . stage-out = 3 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,435 | INFO     | . log creation = 1 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,435 | INFO     | ..............................
[2026-03-14 19:41:41] 2026-03-14 18:40:39,572 | INFO     | 
[2026-03-14 19:41:41] 2026-03-14 18:40:39,572 | INFO     | job summary report
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | --------------------------------------------------
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | PanDA job id: 7045457941
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | task id: 48955010
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | errors: (none)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | pilot state: finished 
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | transexitcode: 0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | exeerrorcode: 0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | exeerrordiag: 
[2026-03-14 19:41:41] 2026-03-14 18:40:39,573 | INFO     | exitcode: 0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | exitmsg: OK
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | cpuconsumptiontime: 50874 s
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | nevents: 400
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | neventsw: 0
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | pid: 6010
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | pgrp: 6010
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | corecount: 8
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | event service: False
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | sizes: {0: 2279089, 1: 2280147, 2: 2280235, 12: 2280235, 10867: 2309387, 10871: 2318569, 10874: 2318707}
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | --------------------------------------------------
[2026-03-14 19:41:41] 2026-03-14 18:40:39,574 | INFO     | 
[2026-03-14 19:41:41] 2026-03-14 18:40:39,575 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-03-14 19:41:41] 2026-03-14 18:40:39,806 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,806 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,806 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,806 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 19:41:41] 2026-03-14 18:40:39,808 | INFO     | job 7045457941 has completed (purged errors)
[2026-03-14 19:41:41] 2026-03-14 18:40:39,809 | INFO     | overall cleanup function is called
[2026-03-14 19:41:41] 2026-03-14 18:40:40,817 | INFO     | --- collectZombieJob: --- 10, [6010]
[2026-03-14 19:41:41] 2026-03-14 18:40:40,817 | INFO     | zombie collector waiting for pid 6010
[2026-03-14 19:41:41] 2026-03-14 18:40:40,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 19:41:41] 2026-03-14 18:40:40,818 | INFO     | collected zombie processes
[2026-03-14 19:41:41] 2026-03-14 18:40:40,818 | INFO     | will attempt to kill all subprocesses of pid=6010
[2026-03-14 19:41:41] 2026-03-14 18:40:40,893 | INFO     | process IDs to be killed: [6010] (in reverse order)
[2026-03-14 19:41:41] 2026-03-14 18:40:41,189 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 19:41:41] 2026-03-14 18:40:41,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 19:41:41] 2026-03-14 18:40:41,191 | INFO     | did not find any defunct processes belonging to 6010
[2026-03-14 19:41:41] 2026-03-14 18:40:41,194 | INFO     | did not find any defunct processes belonging to 6010
[2026-03-14 19:41:41] 2026-03-14 18:40:41,194 | INFO     | ready for new job
[2026-03-14 19:41:41] 2026-03-14 18:40:41,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 19:41:41] 2026-03-14 18:40:41,196 | INFO     | **************************************
[2026-03-14 19:41:41] 2026-03-14 18:40:41,196 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 19:41:41] 2026-03-14 18:40:41,197 | INFO     | **************************************
[2026-03-14 19:41:41] 2026-03-14 18:40:41,197 | INFO     | 
[2026-03-14 19:41:41] 2026-03-14 18:40:41,197 | INFO     | pilot is running in a VM
[2026-03-14 19:41:41] 2026-03-14 18:40:41,197 | INFO     | architecture information:
[2026-03-14 19:41:41] 2026-03-14 18:40:41,198 | INFO     | executing command: cat /etc/os-release
[2026-03-14 19:41:41] 2026-03-14 18:40:41,298 | INFO     | cat /etc/os-release:
[2026-03-14 19:41:41] NAME="CentOS Linux"
[2026-03-14 19:41:41] VERSION="7 (Core)"
[2026-03-14 19:41:41] ID="centos"
[2026-03-14 19:41:41] ID_LIKE="rhel fedora"
[2026-03-14 19:41:41] VERSION_ID="7"
[2026-03-14 19:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 19:41:41] ANSI_COLOR="0;31"
[2026-03-14 19:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 19:41:41] HOME_URL="https://www.centos.org/"
[2026-03-14 19:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 19:41:41] 
[2026-03-14 19:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 19:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 19:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 19:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 19:41:41] 
[2026-03-14 19:41:41] 2026-03-14 18:40:41,298 | INFO     | **************************************
[2026-03-14 19:41:41] 2026-03-14 18:40:41,801 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-03-14 19:41:41] 2026-03-14 18:40:42,043 | INFO     | sufficient remaining disk space (496454598656 B)
[2026-03-14 19:41:41] 2026-03-14 18:40:42,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 19:41:41] 2026-03-14 18:40:42,044 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 19:41:41] 2026-03-14 18:40:42,044 | INFO     | update_server=False
[2026-03-14 19:41:41] 2026-03-14 18:40:42,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 19:41:41] 2026-03-14 18:40:42,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 19:41:41] 2026-03-14 18:40:42,281 | INFO     | all payload control threads have been joined
[2026-03-14 19:41:41] 2026-03-14 18:40:42,321 | INFO     | all data control threads have been joined
[2026-03-14 19:41:41] 2026-03-14 18:40:42,523 | INFO     | all job control threads have been joined
[2026-03-14 19:41:41] 2026-03-14 18:40:42,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:41:41] 2026-03-14 18:40:42,752 | INFO     | aborting loop
[2026-03-14 19:41:41] 2026-03-14 18:40:42,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 19:41:41] 2026-03-14 18:40:43,051 | INFO     | [job] retrieve thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,091 | INFO     | [payload] validate_post thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,242 | INFO     | [job] validate thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,246 | INFO     | [payload] failed_post thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,287 | INFO     | [payload] control thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,328 | INFO     | [data] control thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,529 | INFO     | [job] control thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,577 | INFO     | [data] copytool_in thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,585 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,659 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,758 | INFO     | [job] job monitor thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,799 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:43,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:44,052 | INFO     | [data] copytool_out thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:44,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 19:41:41] 2026-03-14 18:40:45,592 | INFO     | [job] queue monitor thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:40:46,854 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 19:41:41] 2026-03-14 18:41:11,249 | INFO     | PID=1574 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 19:41:41] 2026-03-14 18:41:11,250 | INFO     | .. there are 2 such processes running
[2026-03-14 19:41:41] 2026-03-14 18:41:11,250 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 19:41:41] 2026-03-14 18:41:11,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 19:41:41] 2026-03-14 18:41:11,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 19:41:41] 2026-03-14 18:41:31,024 | INFO     | [monitor] cgroup control has ended
[2026-03-14 19:41:41] 2026-03-14 18:41:31,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386271209280)>', '<ExcThread(monitor, started 140386052884224)>']
[2026-03-14 19:41:41] 2026-03-14 18:41:31,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 19:41:41] 2026-03-14 18:41:31,370 | INFO     | [monitor] control thread has ended
[2026-03-14 19:41:41] 2026-03-14 18:41:36,256 | INFO     | all workflow threads have been joined
[2026-03-14 19:41:41] 2026-03-14 18:41:36,256 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 19:41:41] 2026-03-14 18:41:36,257 | INFO     | traces error code: 0
[2026-03-14 19:41:41] 2026-03-14 18:41:36,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 19:41:41] 2026-03-14 18:41:36,729 [wrapper] ==== pilot stdout END ====
[2026-03-14 19:41:41] 2026-03-14 18:41:36,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 19:41:41] 2026-03-14 18:41:36,903 [wrapper] pilotpid: 1574
[2026-03-14 19:41:41] 2026-03-14 18:41:37,020 [wrapper] Pilot exit status: 0
[2026-03-14 19:41:41] 2026-03-14 18:41:37,503 [wrapper] pandaids: 7045457941
[2026-03-14 19:41:41] 2026-03-14 18:41:38,701 [wrapper] cleanup supervisor_pilot 28052 1575
[2026-03-14 19:41:41] 2026-03-14 18:41:38,765 [wrapper] Test setup, not cleaning
[2026-03-14 19:41:41] 2026-03-14 18:41:38,842 [wrapper] apfmon messages muted
[2026-03-14 19:41:41] 2026-03-14 18:41:38,948 [wrapper] ==== wrapper stdout END ====
[2026-03-14 19:41:41] 2026-03-14 18:41:39,075 [wrapper] ==== wrapper stderr END ====
[2026-03-14 19:41:41]  *** Error codes and diagnostics ***
[2026-03-14 19:41:41]     "exeErrorCode": 0,
[2026-03-14 19:41:41]     "exeErrorDiag": "",
[2026-03-14 19:41:41]     "pilotErrorCode": 0,
[2026-03-14 19:41:41]     "pilotErrorDiag": "",
[2026-03-14 19:41:41]  *** Listing of results directory ***
[2026-03-14 19:41:41] total 616640
[2026-03-14 19:41:41] -rwx------. 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc      5111 Mar 14 02:49 queuedata.json
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc       100 Mar 14 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 19:41:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 16:32 run_atlas
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc       105 Mar 14 16:32 job.xml
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc 435974143 Mar 14 16:32 EVNT.46701403._001734.pool.root.1
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:32 start_atlas.sh
[2026-03-14 19:41:41] drwxrwx--x. 2 boinc boinc        68 Mar 14 16:32 shared
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc    597525 Mar 14 16:32 input.tar.gz
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc      6391 Mar 14 16:32 init_data.xml
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc         0 Mar 14 16:32 boinc_lockfile
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc      2563 Mar 14 16:33 pandaJob.out
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc       415 Mar 14 16:39 workernode_map.json
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc   1004579 Mar 14 16:39 agis_schedconf.cvmfs.json
[2026-03-14 19:41:41] drwx------. 5 boinc boinc      4096 Mar 14 16:39 pilot3
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc 187622652 Mar 14 19:39 HITS.48955010._036962.pool.root.1
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc       531 Mar 14 19:39 boinc_task_state.xml
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc        95 Mar 14 19:40 pilot_heartbeat.json
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc      1020 Mar 14 19:40 memory_monitor_summary.json
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc   1511579 Mar 14 19:40 agis_ddmendpoints.agis.ALL.json
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc    415829 Mar 14 19:40 log.48955010._036962.job.log.tgz.1
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc      6324 Mar 14 19:40 heartbeat.json
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc      8192 Mar 14 19:41 boinc_mmap_file
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc      4879 Mar 14 19:41 pilotlog.txt
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc        28 Mar 14 19:41 wrapper_checkpoint.txt
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc   1547336 Mar 14 19:41 log.48955010._036962.job.log.1
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc       357 Mar 14 19:41 output.list
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc       620 Mar 14 19:41 runtime_log
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc   1976320 Mar 14 19:41 result.tar.gz
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc      8816 Mar 14 19:41 runtime_log.err
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc       654 Mar 14 19:41 DyzKDmyITL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVsoLDm5mtj6m.diag
[2026-03-14 19:41:41] -rw-r--r--. 1 boinc boinc     20673 Mar 14 19:41 stderr.txt
[2026-03-14 19:41:41] HITS file was successfully produced:
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc 187622652 Mar 14 19:39 shared/HITS.pool.root.1
[2026-03-14 19:41:41]  *** Contents of shared directory: ***
[2026-03-14 19:41:41] total 611516
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc 435974143 Mar 14 16:32 ATLAS.root_0
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc     15845 Mar 14 16:32 start_atlas.sh
[2026-03-14 19:41:41] -rw-r--r--. 2 boinc boinc    597525 Mar 14 16:32 input.tar.gz
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc 187622652 Mar 14 19:39 HITS.pool.root.1
[2026-03-14 19:41:41] -rw-------. 1 boinc boinc   1976320 Mar 14 19:41 result.tar.gz
19:41:43 (30006): run_atlas exited; CPU time 50990.152760
19:41:43 (30006): called boinc_finish(0)

</stderr_txt>
]]>

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