Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:08 (308428): wrapper (7.7.26015): starting
16:06:08 (308428): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:06:08] Arguments: --nthreads 4
[2026-03-15 16:06:08] Threads: 4
[2026-03-15 16:06:08] Checking for CVMFS
[2026-03-15 16:06:08] No cvmfs_config command found, will try listing directly
[2026-03-15 16:06:08] CVMFS is ok
[2026-03-15 16:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:06:08] Further information can be found at the LHC@home message board.
[2026-03-15 16:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:06:08] Checking for apptainer binary...
[2026-03-15 16:06:08] which: no apptainer in ((null))
[2026-03-15 16:06:08] apptainer is not installed, using version from CVMFS
[2026-03-15 16:06:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:06:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-15 16:06:08] apptainer works
[2026-03-15 16:06:08] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:06:08] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:06:08] Starting ATLAS job with PandaID=7045457946
[2026-03-15 16:06:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 17:21:34]  *** The last 200 lines of the pilot log: ***
[2026-03-15 17:21:34]  guid=de3b6548-49b5-4ce0-8b61-aaadacd2ce05
[2026-03-15 17:21:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 17:21:34]  is_altstaged=None
[2026-03-15 17:21:34]  is_tar=False
[2026-03-15 17:21:34]  lfn=log.48955010._036967.job.log.tgz.1
[2026-03-15 17:21:34]  mtime=0
[2026-03-15 17:21:34]  protocol_id=None
[2026-03-15 17:21:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 17:21:34]  replicas=None
[2026-03-15 17:21:34]  scope=mc23_13p6TeV
[2026-03-15 17:21:34]  status=None
[2026-03-15 17:21:34]  status_code=0
[2026-03-15 17:21:34]  storage_token=
[2026-03-15 17:21:34]  surl=/var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7045457946/log.48955010._036967.job.log.tgz.1
[2026-03-15 17:21:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/fd/log.48955010._036967.job.log.tgz.1
[2026-03-15 17:21:34]  workdir=None
[2026-03-15 17:21:34] ]
[2026-03-15 17:21:34] 2026-03-15 16:20:36,757 | INFO     | transferring file log.48955010._036967.job.log.tgz.1 from /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7045457946/log.48955010._036967.job.log.tgz.1 to /var/lib/
[2026-03-15 17:21:34] 2026-03-15 16:20:36,757 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7045457946/log.48955010._036967.job.log.tgz.1 /var/lib/boinc/var/slot100/slots/2/
[2026-03-15 17:21:34] 2026-03-15 16:20:36,773 | INFO     | adding to output.list: log.48955010._036967.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/fd/log.48955010._036967.job.log.tg
[2026-03-15 17:21:34] 2026-03-15 16:20:36,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 17:21:34] 2026-03-15 16:20:36,774 | INFO     | summary of transferred files:
[2026-03-15 17:21:34] 2026-03-15 16:20:36,774 | INFO     |  -- lfn=log.48955010._036967.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 17:21:34] 2026-03-15 16:20:36,774 | INFO     | stage-out finished correctly
[2026-03-15 17:21:34] 2026-03-15 16:20:37,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 17:21:34] 2026-03-15 16:20:37,828 | INFO     | time since job start (4457s) is within the limit (345600.0s)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,128 | INFO     | job 7045457946 has state=finished
[2026-03-15 17:21:34] 2026-03-15 16:20:38,128 | INFO     | preparing for final server update for job 7045457946 in state='finished'
[2026-03-15 17:21:34] 2026-03-15 16:20:38,128 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7045457946/jobReport.json
[2026-03-15 17:21:34] 2026-03-15 16:20:38,129 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/2/workernode_map.json
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | INFO     | this job has now completed (state=finished)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | INFO     | log transfer has been attempted: DONE
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | INFO     | job 7045457946 has finished - writing final server update
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2961996/.job.ad'
[2026-03-15 17:21:34] 2026-03-15 16:20:38,130 | INFO     | total number of processed events: 400 (read)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,147 | INFO     | using path: /var/lib/boinc/var/slot100/slots/2/PanDA_Pilot-7045457946/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,148 | INFO     | extracted standard info from prmon json
[2026-03-15 17:21:34] 2026-03-15 16:20:38,148 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 17:21:34] 2026-03-15 16:20:38,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 17:21:34] 2026-03-15 16:20:38,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 17:21:34] 2026-03-15 16:20:38,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | fitting pss+swap vs Time
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | sum of square deviations: 89127252.5
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | sum of deviations: 176504598.00000003
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | mean x: 1773589488.5
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | mean y: 2333169.3333333335
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | intersect: -3510023499.4052005
[2026-03-15 17:21:34] 2026-03-15 16:20:38,149 | INFO     | chi2: 0.0019715013559357857
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | current memory leak: 1.98 B/s (using 66 data points, chi2=0.00)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | could have reported an average CPU frequency of 3603 MHz (6 samples)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | ..............................
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . Timing measurements:
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . get job = 0 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . initial setup = 4 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . payload setup = 5 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . stage-in = 0 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . payload execution = 4436 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . stage-out = 0 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | . log creation = 0 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,150 | INFO     | ..............................
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | 
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | job summary report
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | --------------------------------------------------
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | PanDA job id: 7045457946
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | task id: 48955010
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | errors: (none)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | pilot state: finished 
[2026-03-15 17:21:34] 2026-03-15 16:20:38,362 | INFO     | transexitcode: 0
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | exeerrorcode: 0
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | exeerrordiag: 
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | exitcode: 0
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | exitmsg: OK
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | cpuconsumptiontime: 16990 s
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | nevents: 400
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | neventsw: 0
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | pid: 318842
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | pgrp: 318842
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | corecount: 4
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | event service: False
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | sizes: {0: 2279758, 1: 2280219, 11: 2280219, 4445: 2306392, 4446: 2315470, 4447: 2315608}
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | --------------------------------------------------
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | 
[2026-03-15 17:21:34] 2026-03-15 16:20:38,363 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/2
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | job 7045457946 has completed (purged errors)
[2026-03-15 17:21:34] 2026-03-15 16:20:38,383 | INFO     | overall cleanup function is called
[2026-03-15 17:21:34] 2026-03-15 16:20:39,389 | INFO     | --- collectZombieJob: --- 10, [318842]
[2026-03-15 17:21:34] 2026-03-15 16:20:39,389 | INFO     | zombie collector waiting for pid 318842
[2026-03-15 17:21:34] 2026-03-15 16:20:39,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 17:21:34] 2026-03-15 16:20:39,389 | INFO     | collected zombie processes
[2026-03-15 17:21:34] 2026-03-15 16:20:39,389 | INFO     | will attempt to kill all subprocesses of pid=318842
[2026-03-15 17:21:34] 2026-03-15 16:20:39,841 | INFO     | process IDs to be killed: [318842] (in reverse order)
[2026-03-15 17:21:34] 2026-03-15 16:20:40,046 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 17:21:34] 2026-03-15 16:20:40,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 17:21:34] 2026-03-15 16:20:40,071 | INFO     | did not find any defunct processes belonging to 318842
[2026-03-15 17:21:34] 2026-03-15 16:20:40,094 | INFO     | did not find any defunct processes belonging to 318842
[2026-03-15 17:21:34] 2026-03-15 16:20:40,094 | INFO     | ready for new job
[2026-03-15 17:21:34] 2026-03-15 16:20:40,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 17:21:34] 2026-03-15 16:20:40,096 | INFO     | **************************************
[2026-03-15 17:21:34] 2026-03-15 16:20:40,096 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 17:21:34] 2026-03-15 16:20:40,096 | INFO     | **************************************
[2026-03-15 17:21:34] 2026-03-15 16:20:40,096 | INFO     | 
[2026-03-15 17:21:34] 2026-03-15 16:20:40,102 | INFO     | architecture information:
[2026-03-15 17:21:34] 2026-03-15 16:20:40,102 | INFO     | executing command: cat /etc/os-release
[2026-03-15 17:21:34] 2026-03-15 16:20:40,114 | INFO     | cat /etc/os-release:
[2026-03-15 17:21:34] NAME="CentOS Linux"
[2026-03-15 17:21:34] VERSION="7 (Core)"
[2026-03-15 17:21:34] ID="centos"
[2026-03-15 17:21:34] ID_LIKE="rhel fedora"
[2026-03-15 17:21:34] VERSION_ID="7"
[2026-03-15 17:21:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 17:21:34] ANSI_COLOR="0;31"
[2026-03-15 17:21:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 17:21:34] HOME_URL="https://www.centos.org/"
[2026-03-15 17:21:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 17:21:34] 
[2026-03-15 17:21:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 17:21:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 17:21:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 17:21:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 17:21:34] 
[2026-03-15 17:21:34] 2026-03-15 16:20:40,114 | INFO     | **************************************
[2026-03-15 17:21:34] 2026-03-15 16:20:40,616 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/2
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | INFO     | sufficient remaining disk space (149235433472 B)
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | INFO     | update_server=False
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 17:21:34] 2026-03-15 16:20:40,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 17:21:34] 2026-03-15 16:20:40,764 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 17:21:34] 2026-03-15 16:20:40,764 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 17:21:34] 2026-03-15 16:20:40,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:21:34] 2026-03-15 16:20:40,764 | INFO     | will abort loop
[2026-03-15 17:21:34] 2026-03-15 16:20:40,920 | INFO     | all data control threads have been joined
[2026-03-15 17:21:34] 2026-03-15 16:20:41,637 | INFO     | [job] retrieve thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:41,712 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:41,770 | INFO     | [job] job monitor thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:41,925 | INFO     | [data] control thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:41,952 | INFO     | all job control threads have been joined
[2026-03-15 17:21:34] 2026-03-15 16:20:42,050 | INFO     | [payload] validate_post thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,127 | INFO     | all payload control threads have been joined
[2026-03-15 17:21:34] 2026-03-15 16:20:42,474 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,494 | INFO     | [job] validate thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,585 | INFO     | [payload] failed_post thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,638 | INFO     | [data] copytool_out thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,649 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:42,957 | INFO     | [job] control thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:43,011 | INFO     | [data] copytool_in thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:43,132 | INFO     | [payload] control thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:43,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 17:21:34] 2026-03-15 16:20:43,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 17:21:34] 2026-03-15 16:20:44,209 | INFO     | [job] queue monitor thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:47,459 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:20:51,506 | INFO     | job.realtimelogging is not enabled
[2026-03-15 17:21:34] 2026-03-15 16:20:52,511 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 17:21:34] 2026-03-15 16:21:11,468 | INFO     | PID=312974 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-15 17:21:34] 2026-03-15 16:21:11,471 | INFO     | .. there are 45 such processes running
[2026-03-15 17:21:34] 2026-03-15 16:21:11,472 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 17:21:34] 2026-03-15 16:21:11,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 17:21:34] 2026-03-15 16:21:11,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 17:21:34] 2026-03-15 16:21:15,368 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-15 17:21:34] 2026-03-15 16:21:27,414 | INFO     | [monitor] cgroup control has ended
[2026-03-15 17:21:34] 2026-03-15 16:21:28,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23180330014528)>', '<ExcThread(monitor, started 23180092913408)>']
[2026-03-15 17:21:34] 2026-03-15 16:21:29,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 17:21:34] 2026-03-15 16:21:29,561 | INFO     | [monitor] control thread has ended
[2026-03-15 17:21:34] 2026-03-15 16:21:33,723 | INFO     | all workflow threads have been joined
[2026-03-15 17:21:34] 2026-03-15 16:21:33,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 17:21:34] 2026-03-15 16:21:33,723 | INFO     | traces error code: 0
[2026-03-15 17:21:34] 2026-03-15 16:21:33,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 17:21:34] 2026-03-15 16:21:33,897 [wrapper] ==== pilot stdout END ====
[2026-03-15 17:21:34] 2026-03-15 16:21:33,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 17:21:34] 2026-03-15 16:21:33,900 [wrapper] pilotpid: 312974
[2026-03-15 17:21:34] 2026-03-15 16:21:33,902 [wrapper] Pilot exit status: 0
[2026-03-15 17:21:34] 2026-03-15 16:21:33,908 [wrapper] pandaids: 7045457946
[2026-03-15 17:21:34] 2026-03-15 16:21:34,034 [wrapper] cleanup supervisor_pilot 1051400 312975
[2026-03-15 17:21:34] 2026-03-15 16:21:34,037 [wrapper] Test setup, not cleaning
[2026-03-15 17:21:34] 2026-03-15 16:21:34,040 [wrapper] apfmon messages muted
[2026-03-15 17:21:34] 2026-03-15 16:21:34,042 [wrapper] ==== wrapper stdout END ====
[2026-03-15 17:21:34] 2026-03-15 16:21:34,044 [wrapper] ==== wrapper stderr END ====
[2026-03-15 17:21:34]  *** Error codes and diagnostics ***
[2026-03-15 17:21:34]     "exeErrorCode": 0,
[2026-03-15 17:21:34]     "exeErrorDiag": "",
[2026-03-15 17:21:34]     "pilotErrorCode": 0,
[2026-03-15 17:21:34]     "pilotErrorDiag": "",
[2026-03-15 17:21:34]  *** Listing of results directory ***
[2026-03-15 17:21:34] total 608336
[2026-03-15 17:21:34] -rwx------. 1 boinc boinc     36322 Mar 14 02:49 runpilot2-wrapper.sh
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc    585013 Mar 14 02:49 pilot3.tar.gz
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc      5111 Mar 14 02:49 queuedata.json
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 17:21:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:06 run_atlas
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:06 job.xml
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc 435974143 Mar 15 16:06 EVNT.46701403._001734.pool.root.1
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:06 start_atlas.sh
[2026-03-15 17:21:34] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:06 shared
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc    597527 Mar 15 16:06 input.tar.gz
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc      6710 Mar 15 16:06 init_data.xml
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:06 boinc_lockfile
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc      2563 Mar 15 16:06 pandaJob.out
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc   1006481 Mar 15 16:06 agis_schedconf.cvmfs.json
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc   1511579 Mar 15 16:06 agis_ddmendpoints.agis.ALL.json
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc       445 Mar 15 16:06 workernode_map.json
[2026-03-15 17:21:34] drwx------. 5 boinc boinc      4096 Mar 15 16:06 pilot3
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc 181176929 Mar 15 17:20 HITS.48955010._036967.pool.root.1
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc      1027 Mar 15 17:20 memory_monitor_summary.json
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc    267027 Mar 15 17:20 log.48955010._036967.job.log.tgz.1
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc      6348 Mar 15 17:20 heartbeat.json
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc       530 Mar 15 17:20 boinc_task_state.xml
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc      8192 Mar 15 17:21 boinc_mmap_file
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc        27 Mar 15 17:21 wrapper_checkpoint.txt
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc        95 Mar 15 17:21 pilot_heartbeat.json
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc      5088 Mar 15 17:21 pilotlog.txt
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc    658985 Mar 15 17:21 log.48955010._036967.job.log.1
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc       357 Mar 15 17:21 output.list
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc       620 Mar 15 17:21 runtime_log
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc    942080 Mar 15 17:21 result.tar.gz
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc      9221 Mar 15 17:21 runtime_log.err
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc       662 Mar 15 17:21 pp4KDmyITL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYsoLDmlpjDMm.diag
[2026-03-15 17:21:34] -rw-r--r--. 1 boinc boinc     21179 Mar 15 17:21 stderr.txt
[2026-03-15 17:21:34] HITS file was successfully produced:
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc 181176929 Mar 15 17:20 shared/HITS.pool.root.1
[2026-03-15 17:21:34]  *** Contents of shared directory: ***
[2026-03-15 17:21:34] total 604216
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc 435974143 Mar 15 16:06 ATLAS.root_0
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:06 start_atlas.sh
[2026-03-15 17:21:34] -rw-r--r--. 2 boinc boinc    597527 Mar 15 16:06 input.tar.gz
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc 181176929 Mar 15 17:20 HITS.pool.root.1
[2026-03-15 17:21:34] -rw-------. 1 boinc boinc    942080 Mar 15 17:21 result.tar.gz
17:21:35 (308428): run_atlas exited; CPU time 17176.078483
17:21:35 (308428): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN