Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:21:52 (455474): wrapper (7.7.26015): starting
17:21:52 (455474): wrapper: running run_atlas (--nthreads 4)
[2026-03-14 17:21:52] Arguments: --nthreads 4
[2026-03-14 17:21:52] Threads: 4
[2026-03-14 17:21:52] Checking for CVMFS
[2026-03-14 17:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 17:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 17:21:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 17:21:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 17:21:53] 2.9.2.0 3079 2460 94788 157284 1 49 34038688 36864000 0 130560 0 1224853 99.986 90269 9445 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 17:21:53] CVMFS is ok
[2026-03-14 17:21:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 17:21:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 17:21:53] Further information can be found at the LHC@home message board.
[2026-03-14 17:21:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 17:21:53] Checking for apptainer binary...
[2026-03-14 17:21:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 17:21:53] Running /usr/bin/apptainer --version
[2026-03-14 17:21:53] apptainer version 1.4.1-1.1
[2026-03-14 17:21:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 17:21:53] thA317
[2026-03-14 17:21:53] apptainer works
[2026-03-14 17:21:53] Set ATHENA_PROC_NUMBER=4
[2026-03-14 17:21:53] Set ATHENA_CORE_NUMBER=4
[2026-03-14 17:21:53] Starting ATLAS job with PandaID=7045457210
[2026-03-14 17:21:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:32:18]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:32:18] 2026-03-14 17:31:12,382 | INFO     | executing command: cat /etc/os-release
[2026-03-14 18:32:18] 2026-03-14 17:31:12,397 | INFO     | cat /etc/os-release:
[2026-03-14 18:32:18] NAME="CentOS Linux"
[2026-03-14 18:32:18] VERSION="7 (Core)"
[2026-03-14 18:32:18] ID="centos"
[2026-03-14 18:32:18] ID_LIKE="rhel fedora"
[2026-03-14 18:32:18] VERSION_ID="7"
[2026-03-14 18:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 18:32:18] ANSI_COLOR="0;31"
[2026-03-14 18:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 18:32:18] HOME_URL="https://www.centos.org/"
[2026-03-14 18:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 18:32:18] 
[2026-03-14 18:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 18:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 18:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 18:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 18:32:18] 
[2026-03-14 18:32:18] 2026-03-14 17:31:12,398 | INFO     | **************************************
[2026-03-14 18:32:18] 2026-03-14 17:31:12,901 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 18:32:18] 2026-03-14 17:31:12,919 | INFO     | sufficient remaining disk space (223155847168 B)
[2026-03-14 18:32:18] 2026-03-14 17:31:12,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:32:18] 2026-03-14 17:31:12,919 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:32:18] 2026-03-14 17:31:12,920 | INFO     | update_server=False
[2026-03-14 18:32:18] 2026-03-14 17:31:12,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:32:18] 2026-03-14 17:31:13,269 | INFO     | all data control threads have been joined
[2026-03-14 18:32:18] 2026-03-14 17:31:13,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:32:18] 2026-03-14 17:31:13,398 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 18:32:18] 2026-03-14 17:31:13,398 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 18:32:18] 2026-03-14 17:31:13,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:32:18] 2026-03-14 17:31:13,398 | INFO     | will abort loop
[2026-03-14 18:32:18] 2026-03-14 17:31:13,510 | INFO     | all job control threads have been joined
[2026-03-14 18:32:18] 2026-03-14 17:31:13,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:32:18] 2026-03-14 17:31:13,925 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:13,963 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,149 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,275 | INFO     | [data] control thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,282 | INFO     | all payload control threads have been joined
[2026-03-14 18:32:18] 2026-03-14 17:31:14,404 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,516 | INFO     | [job] control thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,782 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:14,928 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,288 | INFO     | [payload] control thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,311 | INFO     | [job] validate thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,315 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,400 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,468 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:15,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:32:18] 2026-03-14 17:31:16,780 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:17,848 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:23,127 | INFO     | job.realtimelogging is not enabled
[2026-03-14 18:32:18] 2026-03-14 17:31:24,132 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:32:18] 2026-03-14 17:31:43,277 | INFO     | PID=459603 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 18:32:18] 2026-03-14 17:31:43,278 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:32:18] 2026-03-14 17:31:43,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:32:18] 2026-03-14 17:31:43,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:32:18] 2026-03-14 17:32:11,248 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:32:18] 2026-03-14 17:32:12,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218466207552)>', '<ExcThread(monitor, started 140217319155456)>']
[2026-03-14 18:32:18] 2026-03-14 17:32:13,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:32:18] 2026-03-14 17:32:13,433 | INFO     | [monitor] control thread has ended
[2026-03-14 18:32:18] 2026-03-14 17:32:17,873 | INFO     | all workflow threads have been joined
[2026-03-14 18:32:18] 2026-03-14 17:32:17,873 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:32:18] 2026-03-14 17:32:17,873 | INFO     | traces error code: 0
[2026-03-14 18:32:18] 2026-03-14 17:32:17,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:32:18] 2026-03-14 17:32:17,955 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:32:18] 2026-03-14 17:32:17,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:32:18] 2026-03-14 17:32:17,964 [wrapper] pilotpid: 459603
[2026-03-14 18:32:18] 2026-03-14 17:32:17,968 [wrapper] Pilot exit status: 0
[2026-03-14 18:32:18] 2026-03-14 17:32:17,981 [wrapper] pandaids: 7045457210
[2026-03-14 18:32:18] 2026-03-14 17:32:18,007 [wrapper] cleanup supervisor_pilot  469868 459604
[2026-03-14 18:32:18] 2026-03-14 17:32:18,011 [wrapper] Test setup, not cleaning
[2026-03-14 18:32:18] 2026-03-14 17:32:18,015 [wrapper] apfmon messages muted
[2026-03-14 18:32:18] 2026-03-14 17:32:18,019 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:32:18] 2026-03-14 17:32:18,023 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:32:18]  *** Error codes and diagnostics ***
[2026-03-14 18:32:18]     "exeErrorCode": 0,
[2026-03-14 18:32:18]     "exeErrorDiag": "",
[2026-03-14 18:32:18]     "pilotErrorCode": 0,
[2026-03-14 18:32:18]     "pilotErrorDiag": "",
[2026-03-14 18:32:18]  *** Listing of results directory ***
[2026-03-14 18:32:18] total 615516
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-14 18:32:18] -rwx------ 1 boinc boinc     36322 Mar 14 01:53 runpilot2-wrapper.sh
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      5111 Mar 14 01:55 queuedata.json
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc       100 Mar 14 17:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:32:18] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 17:21 run_atlas
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc       105 Mar 14 17:21 job.xml
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc 441008876 Mar 14 17:21 EVNT.46701403._002497.pool.root.1
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc    597539 Mar 14 17:21 input.tar.gz
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc     15845 Mar 14 17:21 start_atlas.sh
[2026-03-14 18:32:18] drwxrwx--x 2 boinc boinc      4096 Mar 14 17:21 shared
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc         0 Mar 14 17:21 boinc_setup_complete
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      6376 Mar 14 17:21 init_data.xml
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc         0 Mar 14 17:21 boinc_lockfile
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      2571 Mar 14 17:21 pandaJob.out
[2026-03-14 18:32:18] -rw------- 1 boinc boinc   1004579 Mar 14 17:22 agis_schedconf.cvmfs.json
[2026-03-14 18:32:18] -rw------- 1 boinc boinc   1511579 Mar 14 17:22 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:32:18] -rw------- 1 boinc boinc       427 Mar 14 17:22 workernode_map.json
[2026-03-14 18:32:18] drwx------ 5 boinc boinc      4096 Mar 14 17:22 pilot3
[2026-03-14 18:32:18] -rw------- 1 boinc boinc 183590262 Mar 14 18:30 HITS.48955015._022007.pool.root.1
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc       530 Mar 14 18:30 boinc_task_state.xml
[2026-03-14 18:32:18] -rw------- 1 boinc boinc      1025 Mar 14 18:31 memory_monitor_summary.json
[2026-03-14 18:32:18] -rw------- 1 boinc boinc    265594 Mar 14 18:31 log.48955015._022007.job.log.tgz.1
[2026-03-14 18:32:18] -rw------- 1 boinc boinc      6322 Mar 14 18:31 heartbeat.json
[2026-03-14 18:32:18] -rw------- 1 boinc boinc        95 Mar 14 18:31 pilot_heartbeat.json
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      8192 Mar 14 18:31 boinc_mmap_file
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc        27 Mar 14 18:31 wrapper_checkpoint.txt
[2026-03-14 18:32:18] -rw------- 1 boinc boinc      5005 Mar 14 18:32 pilotlog.txt
[2026-03-14 18:32:18] -rw------- 1 boinc boinc    615376 Mar 14 18:32 log.48955015._022007.job.log.1
[2026-03-14 18:32:18] -rw------- 1 boinc boinc       357 Mar 14 18:32 output.list
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc       620 Mar 14 18:32 runtime_log
[2026-03-14 18:32:18] -rw------- 1 boinc boinc    901120 Mar 14 18:32 result.tar.gz
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      8896 Mar 14 18:32 runtime_log.err
[2026-03-14 18:32:18] -rw------- 1 boinc boinc       657 Mar 14 18:32 lk8KDm5QSL9n9Rq4apOajLDm4fhM0noT9bVooX4SDm1qoLDmAKScZm.diag
[2026-03-14 18:32:18] -rw-r--r-- 1 boinc boinc      9200 Mar 14 18:32 stderr.txt
[2026-03-14 18:32:18] HITS file was successfully produced:
[2026-03-14 18:32:18] -rw------- 1 boinc boinc 183590262 Mar 14 18:30 shared/HITS.pool.root.1
[2026-03-14 18:32:18]  *** Contents of shared directory: ***
[2026-03-14 18:32:18] total 611452
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc 441008876 Mar 14 17:21 ATLAS.root_0
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc    597539 Mar 14 17:21 input.tar.gz
[2026-03-14 18:32:18] -rw-r--r-- 2 boinc boinc     15845 Mar 14 17:21 start_atlas.sh
[2026-03-14 18:32:18] -rw------- 1 boinc boinc 183590262 Mar 14 18:30 HITS.pool.root.1
[2026-03-14 18:32:18] -rw------- 1 boinc boinc    901120 Mar 14 18:32 result.tar.gz
18:32:19 (455474): run_atlas exited; CPU time 15193.769827
18:32:19 (455474): called boinc_finish(0)

</stderr_txt>
]]>

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