Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:56:24 (886619): wrapper (7.7.26015): starting
16:56:24 (886619): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 16:56:24] Arguments: --nthreads 3
[2026-03-14 16:56:24] Threads: 3
[2026-03-14 16:56:24] Checking for CVMFS
[2026-03-14 16:56:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 16:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 16:56:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 16:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 16:56:25] 2.9.2.0 5444 5662 82428 157282 2 50 32768401 36864000 0 130560 0 2479826 99.984 216157 15167 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 16:56:25] CVMFS is ok
[2026-03-14 16:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 16:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 16:56:25] Further information can be found at the LHC@home message board.
[2026-03-14 16:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 16:56:25] Checking for apptainer binary...
[2026-03-14 16:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 16:56:25] Running /usr/bin/apptainer --version
[2026-03-14 16:56:25] apptainer version 1.4.1-1.1
[2026-03-14 16:56:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 16:56:25] magicA161a
[2026-03-14 16:56:25] apptainer works
[2026-03-14 16:56:25] Set ATHENA_PROC_NUMBER=3
[2026-03-14 16:56:25] Set ATHENA_CORE_NUMBER=3
[2026-03-14 16:56:25] Starting ATLAS job with PandaID=7045323971
[2026-03-14 16:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 18:11:45]  *** The last 200 lines of the pilot log: ***
[2026-03-14 18:11:45] 2026-03-14 17:10:52,400 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | INFO     | sufficient remaining disk space (369847435264 B)
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | INFO     | update_server=False
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 18:11:45] 2026-03-14 17:10:52,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:11:45] 2026-03-14 17:10:52,414 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 18:11:45] 2026-03-14 17:10:52,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 18:11:45] 2026-03-14 17:10:52,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 18:11:45] 2026-03-14 17:10:52,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 18:11:45] 2026-03-14 17:10:52,543 | INFO     | aborting loop
[2026-03-14 18:11:45] 2026-03-14 17:10:52,627 | INFO     | all job control threads have been joined
[2026-03-14 18:11:45] 2026-03-14 17:10:52,807 | INFO     | all payload control threads have been joined
[2026-03-14 18:11:45] 2026-03-14 17:10:52,961 | INFO     | all data control threads have been joined
[2026-03-14 18:11:45] 2026-03-14 17:10:53,419 | INFO     | [job] retrieve thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,419 | INFO     | [job] queue monitor thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,549 | INFO     | [job] job monitor thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,630 | INFO     | [payload] failed_post thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,633 | INFO     | [job] control thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,740 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,812 | INFO     | [payload] control thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:53,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 18:11:45] 2026-03-14 17:10:53,966 | INFO     | [data] control thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,074 | INFO     | [job] validate thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,144 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,162 | INFO     | [payload] validate_post thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,181 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,324 | INFO     | [data] copytool_in thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:54,334 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:55,861 | INFO     | [data] copytool_out thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:10:56,421 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 18:11:45] 2026-03-14 17:11:31,168 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-14 18:11:45] 2026-03-14 17:11:39,524 | INFO     | [monitor] cgroup control has ended
[2026-03-14 18:11:45] 2026-03-14 17:11:40,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546107639616)>', '<ExcThread(monitor, started 140545489893120)>']
[2026-03-14 18:11:45] 2026-03-14 17:11:40,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 18:11:45] 2026-03-14 17:11:40,660 | INFO     | [monitor] control thread has ended
[2026-03-14 18:11:45] 2026-03-14 17:11:45,549 | INFO     | all workflow threads have been joined
[2026-03-14 18:11:45] 2026-03-14 17:11:45,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 18:11:45] 2026-03-14 17:11:45,549 | INFO     | traces error code: 0
[2026-03-14 18:11:45] 2026-03-14 17:11:45,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 18:11:45] 2026-03-14 17:11:45,598 [wrapper] ==== pilot stdout END ====
[2026-03-14 18:11:45] 2026-03-14 17:11:45,601 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 18:11:45] 2026-03-14 17:11:45,603 [wrapper] pilotpid: 890659
[2026-03-14 18:11:45] 2026-03-14 17:11:45,605 [wrapper] Pilot exit status: 0
[2026-03-14 18:11:45] 2026-03-14 17:11:45,613 [wrapper] pandaids: 7045323971
[2026-03-14 18:11:45] 2026-03-14 17:11:45,629 [wrapper] cleanup supervisor_pilot  900540 890660
[2026-03-14 18:11:45] 2026-03-14 17:11:45,631 [wrapper] Test setup, not cleaning
[2026-03-14 18:11:45] 2026-03-14 17:11:45,633 [wrapper] apfmon messages muted
[2026-03-14 18:11:45] 2026-03-14 17:11:45,636 [wrapper] ==== wrapper stdout END ====
[2026-03-14 18:11:45] 2026-03-14 17:11:45,638 [wrapper] ==== wrapper stderr END ====
[2026-03-14 18:11:45]  *** Error codes and diagnostics ***
[2026-03-14 18:11:45]     "exeErrorCode": 0,
[2026-03-14 18:11:45]     "exeErrorDiag": "",
[2026-03-14 18:11:45]     "pilotErrorCode": 0,
[2026-03-14 18:11:45]     "pilotErrorDiag": "",
[2026-03-14 18:11:45]  *** Listing of results directory ***
[2026-03-14 18:11:45] total 615124
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-14 18:11:45] -rwx------ 1 boinc boinc     36322 Mar 14 01:53 runpilot2-wrapper.sh
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      5111 Mar 14 01:55 queuedata.json
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc       100 Mar 14 16:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 18:11:45] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 16:56 run_atlas
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc       105 Mar 14 16:56 job.xml
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc 443828889 Mar 14 16:56 EVNT.46701403._002488.pool.root.1
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc    597531 Mar 14 16:56 input.tar.gz
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc     15845 Mar 14 16:56 start_atlas.sh
[2026-03-14 18:11:45] drwxrwx--x 2 boinc boinc      4096 Mar 14 16:56 shared
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc         0 Mar 14 16:56 boinc_setup_complete
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      6449 Mar 14 16:56 init_data.xml
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc         0 Mar 14 16:56 boinc_lockfile
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      2571 Mar 14 16:56 pandaJob.out
[2026-03-14 18:11:45] -rw------- 1 boinc boinc   1004579 Mar 14 16:56 agis_schedconf.cvmfs.json
[2026-03-14 18:11:45] -rw------- 1 boinc boinc   1511579 Mar 14 16:56 agis_ddmendpoints.agis.ALL.json
[2026-03-14 18:11:45] -rw------- 1 boinc boinc       427 Mar 14 16:56 workernode_map.json
[2026-03-14 18:11:45] drwx------ 5 boinc boinc      4096 Mar 14 16:56 pilot3
[2026-03-14 18:11:45] -rw------- 1 boinc boinc        95 Mar 14 18:09 pilot_heartbeat.json
[2026-03-14 18:11:45] -rw------- 1 boinc boinc 180313260 Mar 14 18:10 HITS.48955015._021554.pool.root.1
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc       530 Mar 14 18:10 boinc_task_state.xml
[2026-03-14 18:11:45] -rw------- 1 boinc boinc      1014 Mar 14 18:10 memory_monitor_summary.json
[2026-03-14 18:11:45] -rw------- 1 boinc boinc    257845 Mar 14 18:10 log.48955015._021554.job.log.tgz.1
[2026-03-14 18:11:45] -rw------- 1 boinc boinc      6310 Mar 14 18:10 heartbeat.json
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      8192 Mar 14 18:11 boinc_mmap_file
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc        27 Mar 14 18:11 wrapper_checkpoint.txt
[2026-03-14 18:11:45] -rw------- 1 boinc boinc      4552 Mar 14 18:11 pilotlog.txt
[2026-03-14 18:11:45] -rw------- 1 boinc boinc    657821 Mar 14 18:11 log.48955015._021554.job.log.1
[2026-03-14 18:11:45] -rw------- 1 boinc boinc       357 Mar 14 18:11 output.list
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc       620 Mar 14 18:11 runtime_log
[2026-03-14 18:11:45] -rw------- 1 boinc boinc    931840 Mar 14 18:11 result.tar.gz
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      8916 Mar 14 18:11 runtime_log.err
[2026-03-14 18:11:45] -rw------- 1 boinc boinc       661 Mar 14 18:11 CcHLDm4QSL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmqVrLDmATL5Vo.diag
[2026-03-14 18:11:45] -rw-r--r-- 1 boinc boinc      7883 Mar 14 18:11 stderr.txt
[2026-03-14 18:11:45] HITS file was successfully produced:
[2026-03-14 18:11:45] -rw------- 1 boinc boinc 180313260 Mar 14 18:10 shared/HITS.pool.root.1
[2026-03-14 18:11:45]  *** Contents of shared directory: ***
[2026-03-14 18:11:45] total 611032
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc 443828889 Mar 14 16:56 ATLAS.root_0
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc    597531 Mar 14 16:56 input.tar.gz
[2026-03-14 18:11:45] -rw-r--r-- 2 boinc boinc     15845 Mar 14 16:56 start_atlas.sh
[2026-03-14 18:11:45] -rw------- 1 boinc boinc 180313260 Mar 14 18:10 HITS.pool.root.1
[2026-03-14 18:11:45] -rw------- 1 boinc boinc    931840 Mar 14 18:11 result.tar.gz
18:11:47 (886619): run_atlas exited; CPU time 12389.532872
18:11:47 (886619): called boinc_finish(0)

</stderr_txt>
]]>

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