Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:21:04 (3945): wrapper (7.7.26015): starting
02:21:04 (3945): wrapper: running run_atlas (--nthreads 12)
[2026-03-14 02:21:04] Arguments: --nthreads 12
[2026-03-14 02:21:04] Threads: 12
[2026-03-14 02:21:04] Checking for CVMFS
[2026-03-14 02:21:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 02:21:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 02:21:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 02:21:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 02:21:04] 2.11.2.0 2947 442788 99700 157268 1 49 16693687 20275200 1 130560 1 192361103 99.956 25124559 15681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 02:21:04] CVMFS is ok
[2026-03-14 02:21:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 02:21:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 02:21:04] Further information can be found at the LHC@home message board.
[2026-03-14 02:21:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 02:21:04] Checking for apptainer binary...
[2026-03-14 02:21:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 02:21:04] Running /usr/bin/apptainer --version
[2026-03-14 02:21:04] apptainer version 1.3.2-1.el7
[2026-03-14 02:21:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 02:21:06] c-205-18.aglt2.org
[2026-03-14 02:21:06] apptainer works
[2026-03-14 02:21:06] Set ATHENA_PROC_NUMBER=12
[2026-03-14 02:21:06] Set ATHENA_CORE_NUMBER=12
[2026-03-14 02:21:06] Starting ATLAS job with PandaID=7045457272
[2026-03-14 02:21:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 03:36:39]  *** The last 200 lines of the pilot log: ***
[2026-03-14 03:36:39]  guid=417b4366-6cde-455e-8dbb-056da872dfd6
[2026-03-14 03:36:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-14 03:36:39]  is_altstaged=None
[2026-03-14 03:36:39]  is_tar=False
[2026-03-14 03:36:39]  lfn=log.48955015._022068.job.log.tgz.1
[2026-03-14 03:36:39]  mtime=0
[2026-03-14 03:36:39]  protocol_id=None
[2026-03-14 03:36:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-14 03:36:39]  replicas=None
[2026-03-14 03:36:39]  scope=mc23_13p6TeV
[2026-03-14 03:36:39]  status=None
[2026-03-14 03:36:39]  status_code=0
[2026-03-14 03:36:39]  storage_token=
[2026-03-14 03:36:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7045457272/log.48955015._022068.job.log.tgz.1
[2026-03-14 03:36:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/c7/log.48955015._022068.job.log.tgz.1
[2026-03-14 03:36:39]  workdir=None
[2026-03-14 03:36:39] ]
[2026-03-14 03:36:39] 2026-03-14 07:35:29,425 | INFO     | transferring file log.48955015._022068.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7045457272/log.48955015._022068.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-14 03:36:39] 2026-03-14 07:35:29,425 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7045457272/log.48955015._022068.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955015._022068.job
[2026-03-14 03:36:39] 2026-03-14 07:35:29,446 | INFO     | adding to output.list: log.48955015._022068.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/c7/log.48955015._022068.job.log.tg
[2026-03-14 03:36:39] 2026-03-14 07:35:29,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 03:36:39] 2026-03-14 07:35:29,448 | INFO     | summary of transferred files:
[2026-03-14 03:36:39] 2026-03-14 07:35:29,448 | INFO     |  -- lfn=log.48955015._022068.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 03:36:39] 2026-03-14 07:35:29,448 | INFO     | stage-out finished correctly
[2026-03-14 03:36:39] 2026-03-14 07:35:29,600 | INFO     | time since job start (4443s) is within the limit (345600.0s)
[2026-03-14 03:36:39] 2026-03-14 07:35:30,359 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 03:36:39] 2026-03-14 07:35:31,606 | INFO     | time since job start (4445s) is within the limit (345600.0s)
[2026-03-14 03:36:39] 2026-03-14 07:35:31,679 | INFO     | monitor loop #340: job 0:7045457272 is in state 'finished'
[2026-03-14 03:36:39] 2026-03-14 07:35:31,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,292 | INFO     | job 7045457272 has state=finished
[2026-03-14 03:36:39] 2026-03-14 07:35:32,292 | INFO     | preparing for final server update for job 7045457272 in state='finished'
[2026-03-14 03:36:39] 2026-03-14 07:35:32,293 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045457272/jobReport.json
[2026-03-14 03:36:39] 2026-03-14 07:35:32,296 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 03:36:39] 2026-03-14 07:35:32,296 | INFO     | this job has now completed (state=finished)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,296 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,296 | INFO     | log transfer has been attempted: DONE
[2026-03-14 03:36:39] 2026-03-14 07:35:32,297 | INFO     | job 7045457272 has finished - writing final server update
[2026-03-14 03:36:39] 2026-03-14 07:35:32,297 | INFO     | total number of processed events: 400 (read)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,299 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045457272/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,300 | INFO     | extracted standard info from prmon json
[2026-03-14 03:36:39] 2026-03-14 07:35:32,300 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 03:36:39] 2026-03-14 07:35:32,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 03:36:39] 2026-03-14 07:35:32,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 03:36:39] 2026-03-14 07:35:32,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 03:36:39] 2026-03-14 07:35:32,302 | INFO     | fitting pss+swap vs Time
[2026-03-14 03:36:39] 2026-03-14 07:35:32,302 | INFO     | sum of square deviations: 89127252.5
[2026-03-14 03:36:39] 2026-03-14 07:35:32,302 | INFO     | sum of deviations: -3250985850.0000005
[2026-03-14 03:36:39] 2026-03-14 07:35:32,302 | INFO     | mean x: 1773471597.5
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | mean y: 2805735.4242424243
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | intersect: 64691561498.98148
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | chi2: 0.22300610566995924
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | current memory leak: -36.48 B/s (using 66 data points, chi2=0.22)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | could have reported an average CPU frequency of 1662 MHz (6 samples)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,303 | INFO     | ..............................
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . Timing measurements:
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . get job = 0 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . initial setup = 7 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . payload setup = 7 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . stage-in = 0 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . payload execution = 4419 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . stage-out = 0 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | . log creation = 0 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,304 | INFO     | ..............................
[2026-03-14 03:36:39] 2026-03-14 07:35:32,381 | INFO     | 
[2026-03-14 03:36:39] 2026-03-14 07:35:32,381 | INFO     | job summary report
[2026-03-14 03:36:39] 2026-03-14 07:35:32,381 | INFO     | --------------------------------------------------
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | PanDA job id: 7045457272
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | task id: 48955015
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | errors: (none)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | pilot state: finished 
[2026-03-14 03:36:39] 2026-03-14 07:35:32,382 | INFO     | transexitcode: 0
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | exeerrorcode: 0
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | exeerrordiag: 
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | exitcode: 0
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | exitmsg: OK
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | cpuconsumptiontime: 45119 s
[2026-03-14 03:36:39] 2026-03-14 07:35:32,383 | INFO     | nevents: 400
[2026-03-14 03:36:39] 2026-03-14 07:35:32,384 | INFO     | neventsw: 0
[2026-03-14 03:36:39] 2026-03-14 07:35:32,384 | INFO     | pid: 12030
[2026-03-14 03:36:39] 2026-03-14 07:35:32,384 | INFO     | pgrp: 12030
[2026-03-14 03:36:39] 2026-03-14 07:35:32,384 | INFO     | corecount: 12
[2026-03-14 03:36:39] 2026-03-14 07:35:32,384 | INFO     | event service: False
[2026-03-14 03:36:39] 2026-03-14 07:35:32,385 | INFO     | sizes: {0: 2279749, 1: 2280266, 12: 2280266, 4429: 2306360, 4432: 2315358, 4433: 2315414, 4434: 2315736}
[2026-03-14 03:36:39] 2026-03-14 07:35:32,385 | INFO     | --------------------------------------------------
[2026-03-14 03:36:39] 2026-03-14 07:35:32,385 | INFO     | 
[2026-03-14 03:36:39] 2026-03-14 07:35:32,385 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 03:36:39] 2026-03-14 07:35:32,409 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,409 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,409 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,409 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,412 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,412 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 03:36:39] 2026-03-14 07:35:32,412 | INFO     | job 7045457272 has completed (purged errors)
[2026-03-14 03:36:39] 2026-03-14 07:35:32,412 | INFO     | overall cleanup function is called
[2026-03-14 03:36:39] 2026-03-14 07:35:33,421 | INFO     | --- collectZombieJob: --- 10, [12030]
[2026-03-14 03:36:39] 2026-03-14 07:35:33,421 | INFO     | zombie collector waiting for pid 12030
[2026-03-14 03:36:39] 2026-03-14 07:35:33,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 03:36:39] 2026-03-14 07:35:33,421 | INFO     | collected zombie processes
[2026-03-14 03:36:39] 2026-03-14 07:35:33,421 | INFO     | will attempt to kill all subprocesses of pid=12030
[2026-03-14 03:36:39] 2026-03-14 07:35:33,512 | INFO     | process IDs to be killed: [12030] (in reverse order)
[2026-03-14 03:36:39] 2026-03-14 07:35:33,566 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 03:36:39] 2026-03-14 07:35:33,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 03:36:39] 2026-03-14 07:35:33,569 | INFO     | did not find any defunct processes belonging to 12030
[2026-03-14 03:36:39] 2026-03-14 07:35:33,571 | INFO     | did not find any defunct processes belonging to 12030
[2026-03-14 03:36:39] 2026-03-14 07:35:33,572 | INFO     | ready for new job
[2026-03-14 03:36:39] 2026-03-14 07:35:33,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 03:36:39] 2026-03-14 07:35:33,573 | INFO     | **************************************
[2026-03-14 03:36:39] 2026-03-14 07:35:33,573 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 03:36:39] 2026-03-14 07:35:33,573 | INFO     | **************************************
[2026-03-14 03:36:39] 2026-03-14 07:35:33,573 | INFO     | 
[2026-03-14 03:36:39] 2026-03-14 07:35:33,574 | INFO     | architecture information:
[2026-03-14 03:36:39] 2026-03-14 07:35:33,574 | INFO     | executing command: cat /etc/os-release
[2026-03-14 03:36:39] 2026-03-14 07:35:33,589 | INFO     | cat /etc/os-release:
[2026-03-14 03:36:39] NAME="CentOS Linux"
[2026-03-14 03:36:39] VERSION="7 (Core)"
[2026-03-14 03:36:39] ID="centos"
[2026-03-14 03:36:39] ID_LIKE="rhel fedora"
[2026-03-14 03:36:39] VERSION_ID="7"
[2026-03-14 03:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 03:36:39] ANSI_COLOR="0;31"
[2026-03-14 03:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 03:36:39] HOME_URL="https://www.centos.org/"
[2026-03-14 03:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 03:36:39] 
[2026-03-14 03:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 03:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 03:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 03:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 03:36:39] 
[2026-03-14 03:36:39] 2026-03-14 07:35:33,590 | INFO     | **************************************
[2026-03-14 03:36:39] 2026-03-14 07:35:34,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 03:36:39] 2026-03-14 07:35:34,113 | INFO     | sufficient remaining disk space (28890365952 B)
[2026-03-14 03:36:39] 2026-03-14 07:35:34,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 03:36:39] 2026-03-14 07:35:34,113 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 03:36:39] 2026-03-14 07:35:34,114 | INFO     | update_server=False
[2026-03-14 03:36:39] 2026-03-14 07:35:34,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 03:36:39] 2026-03-14 07:35:34,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:36:39] 2026-03-14 07:35:34,182 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 03:36:39] 2026-03-14 07:35:34,182 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 03:36:39] 2026-03-14 07:35:34,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 03:36:39] 2026-03-14 07:35:34,182 | INFO     | will abort loop
[2026-03-14 03:36:39] 2026-03-14 07:35:34,213 | INFO     | all payload control threads have been joined
[2026-03-14 03:36:39] 2026-03-14 07:35:34,562 | INFO     | all data control threads have been joined
[2026-03-14 03:36:39] 2026-03-14 07:35:34,692 | INFO     | all job control threads have been joined
[2026-03-14 03:36:39] 2026-03-14 07:35:35,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 03:36:39] 2026-03-14 07:35:35,120 | INFO     | [job] retrieve thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,120 | INFO     | [job] queue monitor thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,168 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,186 | INFO     | [job] job monitor thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,218 | INFO     | [payload] control thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,343 | INFO     | [data] copytool_in thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,386 | INFO     | [payload] failed_post thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,569 | INFO     | [data] control thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,699 | INFO     | [job] control thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:35,834 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:36,078 | INFO     | [job] validate thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:36,393 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:36,412 | INFO     | [payload] validate_post thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:36,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 03:36:39] 2026-03-14 07:35:36,524 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:37,045 | INFO     | [data] copytool_out thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:35:40,450 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 03:36:39] 2026-03-14 07:36:04,811 | INFO     | PID=7645 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-14 03:36:39] 2026-03-14 07:36:04,812 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 03:36:39] 2026-03-14 07:36:04,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 03:36:39] 2026-03-14 07:36:04,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 03:36:39] 2026-03-14 07:36:18,529 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-03-14 03:36:39] 2026-03-14 07:36:32,546 | INFO     | [monitor] cgroup control has ended
[2026-03-14 03:36:39] 2026-03-14 07:36:33,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710332225344)>', '<ExcThread(monitor, started 139709229553408)>']
[2026-03-14 03:36:39] 2026-03-14 07:36:34,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 03:36:39] 2026-03-14 07:36:34,941 | INFO     | [monitor] control thread has ended
[2026-03-14 03:36:39] 2026-03-14 07:36:38,997 | INFO     | all workflow threads have been joined
[2026-03-14 03:36:39] 2026-03-14 07:36:38,997 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 03:36:39] 2026-03-14 07:36:38,998 | INFO     | traces error code: 0
[2026-03-14 03:36:39] 2026-03-14 07:36:38,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 03:36:39] 2026-03-14 07:36:39,097 [wrapper] ==== pilot stdout END ====
[2026-03-14 03:36:39] 2026-03-14 07:36:39,101 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 03:36:39] 2026-03-14 07:36:39,105 [wrapper] pilotpid: 7645
[2026-03-14 03:36:39] 2026-03-14 07:36:39,109 [wrapper] Pilot exit status: 0
[2026-03-14 03:36:39] 2026-03-14 07:36:39,125 [wrapper] pandaids: 7045457272
[2026-03-14 03:36:39] 2026-03-14 07:36:39,171 [wrapper] cleanup supervisor_pilot  1881 7646
[2026-03-14 03:36:39] 2026-03-14 07:36:39,175 [wrapper] Test setup, not cleaning
[2026-03-14 03:36:39] 2026-03-14 07:36:39,178 [wrapper] apfmon messages muted
[2026-03-14 03:36:39] 2026-03-14 07:36:39,182 [wrapper] ==== wrapper stdout END ====
[2026-03-14 03:36:39] 2026-03-14 07:36:39,186 [wrapper] ==== wrapper stderr END ====
[2026-03-14 03:36:39]  *** Error codes and diagnostics ***
[2026-03-14 03:36:39]     "exeErrorCode": 0,
[2026-03-14 03:36:39]     "exeErrorDiag": "",
[2026-03-14 03:36:39]     "pilotErrorCode": 0,
[2026-03-14 03:36:39]     "pilotErrorDiag": "",
[2026-03-14 03:36:39]  *** Listing of results directory ***
[2026-03-14 03:36:39] total 626072
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas    585013 Mar 13 20:45 pilot3.tar.gz
[2026-03-14 03:36:39] -rwx------ 1 boincer umatlas     36322 Mar 13 20:51 runpilot2-wrapper.sh
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas      5111 Mar 13 20:52 queuedata.json
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas       100 Mar 14 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 03:36:39] -rwxr-xr-x 1 boincer umatlas      7986 Mar 14 02:20 run_atlas
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas       105 Mar 14 02:20 job.xml
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas 442080145 Mar 14 02:21 EVNT.46701403._002498.pool.root.1
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 02:21 start_atlas.sh
[2026-03-14 03:36:39] drwxrwx--x 2 boincer umatlas      4096 Mar 14 02:21 shared
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas    597538 Mar 14 02:21 input.tar.gz
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas         0 Mar 14 02:21 boinc_lockfile
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas      2572 Mar 14 02:21 pandaJob.out
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas        57 Mar 14 02:21 setup.sh.local
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas   1004579 Mar 14 02:21 agis_schedconf.cvmfs.json
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas   1511579 Mar 14 02:21 agis_ddmendpoints.agis.ALL.json
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas       433 Mar 14 02:21 workernode_map.json
[2026-03-14 03:36:39] drwx------ 5 boincer umatlas      4096 Mar 14 02:21 pilot3
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas      5953 Mar 14 03:29 init_data.xml
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas 192967945 Mar 14 03:34 HITS.48955015._022068.pool.root.1
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas       531 Mar 14 03:35 boinc_task_state.xml
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas        95 Mar 14 03:35 pilot_heartbeat.json
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas      1044 Mar 14 03:35 memory_monitor_summary.json
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas    404455 Mar 14 03:35 log.48955015._022068.job.log.tgz.1
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas      6410 Mar 14 03:35 heartbeat.json
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas      8192 Mar 14 03:36 boinc_mmap_file
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas        27 Mar 14 03:36 wrapper_checkpoint.txt
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas      4927 Mar 14 03:36 pilotlog.txt
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas    649634 Mar 14 03:36 log.48955015._022068.job.log.1
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas       357 Mar 14 03:36 output.list
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas       620 Mar 14 03:36 runtime_log
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas   1075200 Mar 14 03:36 result.tar.gz
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas      9343 Mar 14 03:36 runtime_log.err
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas       658 Mar 14 03:36 mnSMDmIPSL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPnoLDmvmBONm.diag
[2026-03-14 03:36:39] -rw-r--r-- 1 boincer umatlas     21356 Mar 14 03:36 stderr.txt
[2026-03-14 03:36:39] HITS file was successfully produced:
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas 192967945 Mar 14 03:34 shared/HITS.pool.root.1
[2026-03-14 03:36:39]  *** Contents of shared directory: ***
[2026-03-14 03:36:39] total 621824
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas 442080145 Mar 14 02:21 ATLAS.root_0
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas     15845 Mar 14 02:21 start_atlas.sh
[2026-03-14 03:36:39] -rw-r--r-- 2 boincer umatlas    597538 Mar 14 02:21 input.tar.gz
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas 192967945 Mar 14 03:34 HITS.pool.root.1
[2026-03-14 03:36:39] -rw------- 1 boincer umatlas   1075200 Mar 14 03:36 result.tar.gz
03:36:40 (3945): run_atlas exited; CPU time 45109.232479
03:36:40 (3945): called boinc_finish(0)

</stderr_txt>
]]>

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