Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:32:38 (28720): wrapper (7.7.26015): starting
15:32:38 (28720): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 15:32:38] Arguments: --nthreads 3
[2026-03-14 15:32:38] Threads: 3
[2026-03-14 15:32:38] Checking for CVMFS
[2026-03-14 15:32:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 15:32:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 15:32:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 15:32:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 15:32:39] 2.9.2.0 3054 178 52808 157280 2 50 30977395 36864000 0 130560 0 74897 99.994 5375 3987 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 15:32:39] CVMFS is ok
[2026-03-14 15:32:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 15:32:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 15:32:39] Further information can be found at the LHC@home message board.
[2026-03-14 15:32:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 15:32:39] Checking for apptainer binary...
[2026-03-14 15:32:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 15:32:39] Running /usr/bin/apptainer --version
[2026-03-14 15:32:39] apptainer version 1.4.1-1.1
[2026-03-14 15:32:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 15:32:39] atlasA230
[2026-03-14 15:32:39] apptainer works
[2026-03-14 15:32:39] Set ATHENA_PROC_NUMBER=3
[2026-03-14 15:32:39] Set ATHENA_CORE_NUMBER=3
[2026-03-14 15:32:39] Starting ATLAS job with PandaID=7045323983
[2026-03-14 15:32:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 16:49:59]  *** The last 200 lines of the pilot log: ***
[2026-03-14 16:49:59] 2026-03-14 15:49:23,784 | INFO     | all data control threads have been joined
[2026-03-14 16:49:59] 2026-03-14 15:49:23,866 | INFO     | [payload] failed_post thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:23,901 | INFO     | all payload control threads have been joined
[2026-03-14 16:49:59] 2026-03-14 15:49:24,179 | INFO     | [job] control thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,393 | INFO     | [payload] validate_post thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,548 | INFO     | [job] job monitor thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,789 | INFO     | [data] control thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,903 | INFO     | [job] validate thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,903 | INFO     | [payload] control thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:24,977 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:25,003 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:25,003 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:25,144 | INFO     | [data] copytool_in thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:25,145 | INFO     | [data] copytool_out thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:25,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 16:49:59] 2026-03-14 15:49:29,379 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:33,722 | INFO     | job.realtimelogging is not enabled
[2026-03-14 16:49:59] 2026-03-14 15:49:34,728 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 16:49:59] 2026-03-14 15:49:52,841 | INFO     | PID=32760 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 16:49:59] 2026-03-14 15:49:52,841 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 16:49:59] 2026-03-14 15:49:52,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 16:49:59] 2026-03-14 15:49:52,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 16:49:59] 2026-03-14 15:49:53,371 | INFO     | [monitor] cgroup control has ended
[2026-03-14 16:49:59] 2026-03-14 15:49:54,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686398011200)>', '<ExcThread(monitor, started 140686040999680)>']
[2026-03-14 16:49:59] 2026-03-14 15:49:54,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 16:49:59] 2026-03-14 15:49:54,852 | INFO     | [monitor] control thread has ended
[2026-03-14 16:49:59] 2026-03-14 15:49:59,665 | INFO     | all workflow threads have been joined
[2026-03-14 16:49:59] 2026-03-14 15:49:59,665 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 16:49:59] 2026-03-14 15:49:59,665 | INFO     | traces error code: 0
[2026-03-14 16:49:59] 2026-03-14 15:49:59,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 16:49:59] 2026-03-14 15:49:59,715 [wrapper] ==== pilot stdout END ====
[2026-03-14 16:49:59] 2026-03-14 15:49:59,717 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 16:49:59] 2026-03-14 15:49:59,719 [wrapper] pilotpid: 32760
[2026-03-14 16:49:59] 2026-03-14 15:49:59,722 [wrapper] Pilot exit status: 0
[2026-03-14 16:49:59] 2026-03-14 15:49:59,729 [wrapper] pandaids: 7045323983
[2026-03-14 16:49:59] 2026-03-14 15:49:59,744 [wrapper] cleanup supervisor_pilot   42425 32761
[2026-03-14 16:49:59] 2026-03-14 15:49:59,747 [wrapper] Test setup, not cleaning
[2026-03-14 16:49:59] 2026-03-14 15:49:59,749 [wrapper] apfmon messages muted
[2026-03-14 16:49:59] 2026-03-14 15:49:59,751 [wrapper] ==== wrapper stdout END ====
[2026-03-14 16:49:59] 2026-03-14 15:49:59,753 [wrapper] ==== wrapper stderr END ====
[2026-03-14 16:49:59]  *** Error codes and diagnostics ***
[2026-03-14 16:49:59]     "exeErrorCode": 0,
[2026-03-14 16:49:59]     "exeErrorDiag": "",
[2026-03-14 16:49:59]     "pilotErrorCode": 0,
[2026-03-14 16:49:59]     "pilotErrorDiag": "",
[2026-03-14 16:49:59]  *** Listing of results directory ***
[2026-03-14 16:49:59] total 616876
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc    585013 Mar 14 01:45 pilot3.tar.gz
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      5111 Mar 14 01:50 queuedata.json
[2026-03-14 16:49:59] -rwx------ 1 boinc boinc     36322 Mar 14 01:50 runpilot2-wrapper.sh
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc       100 Mar 14 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 16:49:59] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 15:32 run_atlas
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc       105 Mar 14 15:32 job.xml
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc 443828889 Mar 14 15:32 EVNT.46701403._002488.pool.root.1
[2026-03-14 16:49:59] drwxrwx--x 2 boinc boinc      4096 Mar 14 15:32 shared
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc    597536 Mar 14 15:32 input.tar.gz
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc     15845 Mar 14 15:32 start_atlas.sh
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc         0 Mar 14 15:32 boinc_setup_complete
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      6441 Mar 14 15:32 init_data.xml
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc         0 Mar 14 15:32 boinc_lockfile
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      2572 Mar 14 15:32 pandaJob.out
[2026-03-14 16:49:59] -rw------- 1 boinc boinc   1004579 Mar 14 15:32 agis_schedconf.cvmfs.json
[2026-03-14 16:49:59] -rw------- 1 boinc boinc   1511579 Mar 14 15:32 agis_ddmendpoints.agis.ALL.json
[2026-03-14 16:49:59] -rw------- 1 boinc boinc       430 Mar 14 15:32 workernode_map.json
[2026-03-14 16:49:59] drwx------ 5 boinc boinc      4096 Mar 14 15:32 pilot3
[2026-03-14 16:49:59] -rw------- 1 boinc boinc 182040652 Mar 14 16:48 HITS.48955015._021566.pool.root.1
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc       530 Mar 14 16:49 boinc_task_state.xml
[2026-03-14 16:49:59] -rw------- 1 boinc boinc        95 Mar 14 16:49 pilot_heartbeat.json
[2026-03-14 16:49:59] -rw------- 1 boinc boinc      1018 Mar 14 16:49 memory_monitor_summary.json
[2026-03-14 16:49:59] -rw------- 1 boinc boinc    272492 Mar 14 16:49 log.48955015._021566.job.log.tgz.1
[2026-03-14 16:49:59] -rw------- 1 boinc boinc      6325 Mar 14 16:49 heartbeat.json
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      8192 Mar 14 16:49 boinc_mmap_file
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc        27 Mar 14 16:49 wrapper_checkpoint.txt
[2026-03-14 16:49:59] -rw------- 1 boinc boinc      4818 Mar 14 16:49 pilotlog.txt
[2026-03-14 16:49:59] -rw------- 1 boinc boinc    675707 Mar 14 16:49 log.48955015._021566.job.log.1
[2026-03-14 16:49:59] -rw------- 1 boinc boinc       357 Mar 14 16:49 output.list
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc       620 Mar 14 16:49 runtime_log
[2026-03-14 16:49:59] -rw------- 1 boinc boinc    962560 Mar 14 16:49 result.tar.gz
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      8911 Mar 14 16:49 runtime_log.err
[2026-03-14 16:49:59] -rw------- 1 boinc boinc       660 Mar 14 16:49 4FuNDm0NSL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmShoLDmxw1ndm.diag
[2026-03-14 16:49:59] -rw-r--r-- 1 boinc boinc      6525 Mar 14 16:49 stderr.txt
[2026-03-14 16:49:59] HITS file was successfully produced:
[2026-03-14 16:49:59] -rw------- 1 boinc boinc 182040652 Mar 14 16:48 shared/HITS.pool.root.1
[2026-03-14 16:49:59]  *** Contents of shared directory: ***
[2026-03-14 16:49:59] total 612752
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc 443828889 Mar 14 15:32 ATLAS.root_0
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc    597536 Mar 14 15:32 input.tar.gz
[2026-03-14 16:49:59] -rw-r--r-- 2 boinc boinc     15845 Mar 14 15:32 start_atlas.sh
[2026-03-14 16:49:59] -rw------- 1 boinc boinc 182040652 Mar 14 16:48 HITS.pool.root.1
[2026-03-14 16:49:59] -rw------- 1 boinc boinc    962560 Mar 14 16:49 result.tar.gz
16:50:01 (28720): run_atlas exited; CPU time 12841.748448
16:50:01 (28720): called boinc_finish(0)

</stderr_txt>
]]>

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