Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (3067304): wrapper (7.7.26015): starting
00:03:54 (3067304): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 00:03:54] Arguments: --nthreads 8
[2026-03-14 00:03:54] Threads: 8
[2026-03-14 00:03:54] Checking for CVMFS
[2026-03-14 00:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 00:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 00:03:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 00:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 00:03:59] 2.13.3.0 8838 113163 404072 157263 0 180 21952729 39288832 24033 16776704 0 175773148 99.505 232414960 31286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-14 00:03:59] CVMFS is ok
[2026-03-14 00:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 00:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 00:03:59] Further information can be found at the LHC@home message board.
[2026-03-14 00:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 00:03:59] Checking for apptainer binary...
[2026-03-14 00:03:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 00:03:59] Running /usr/bin/apptainer --version
[2026-03-14 00:03:59] apptainer version 1.4.5-2.el9
[2026-03-14 00:03:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 00:04:01] c-211-28.aglt2.org
[2026-03-14 00:04:01] apptainer works
[2026-03-14 00:04:01] Set ATHENA_PROC_NUMBER=8
[2026-03-14 00:04:01] Set ATHENA_CORE_NUMBER=8
[2026-03-14 00:04:01] Starting ATLAS job with PandaID=7045264656
[2026-03-14 00:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 01:00:37]  *** The last 200 lines of the pilot log: ***
[2026-03-15 01:00:37] 2026-03-15 04:59:51,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 01:00:37] 2026-03-15 04:59:51,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 01:00:37] 2026-03-15 04:59:51,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 01:00:37] 2026-03-15 04:59:51,835 | INFO     | fitting pss+swap vs Time
[2026-03-15 01:00:37] 2026-03-15 04:59:51,837 | INFO     | sum of square deviations: 976924976605.6392
[2026-03-15 01:00:37] 2026-03-15 04:59:52,047 | INFO     | monitor loop #3506: job 0:7045264656 is in state 'finished'
[2026-03-15 01:00:37] 2026-03-15 04:59:52,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 01:00:37] 2026-03-15 04:59:52,273 | INFO     | sum of deviations: 1233373033976.853
[2026-03-15 01:00:37] 2026-03-15 04:59:52,273 | INFO     | mean x: 1773506052.201228
[2026-03-15 01:00:37] 2026-03-15 04:59:52,273 | INFO     | mean y: 2486426.081855389
[2026-03-15 01:00:37] 2026-03-15 04:59:52,274 | INFO     | intersect: -2236574497.4907207
[2026-03-15 01:00:37] 2026-03-15 04:59:52,288 | INFO     | chi2: 6.370834407842404
[2026-03-15 01:00:37] 2026-03-15 04:59:52,319 | INFO     | sum of square deviations: 966963263957.8549
[2026-03-15 01:00:37] 2026-03-15 04:59:52,905 | INFO     | sum of deviations: 1414021160138.0398
[2026-03-15 01:00:37] 2026-03-15 04:59:52,927 | INFO     | mean x: 1773505899.7049966
[2026-03-15 01:00:37] 2026-03-15 04:59:52,927 | INFO     | mean y: 2489185.665982204
[2026-03-15 01:00:37] 2026-03-15 04:59:52,927 | INFO     | intersect: -2590964943.6543007
[2026-03-15 01:00:37] 2026-03-15 04:59:52,929 | INFO     | chi2: 4.992507132458308
[2026-03-15 01:00:37] 2026-03-15 04:59:52,930 | INFO     | current chi2=4.992507132458308 (change=21.634956854119373 %)
[2026-03-15 01:00:37] 2026-03-15 04:59:52,930 | INFO     | right removable region: 1460
[2026-03-15 01:00:37] 2026-03-15 04:59:52,932 | INFO     | sum of square deviations: 966962278075.8534
[2026-03-15 01:00:37] 2026-03-15 04:59:53,364 | INFO     | sum of deviations: 764178632570.8512
[2026-03-15 01:00:37] 2026-03-15 04:59:53,364 | INFO     | mean x: 1773506204.7049966
[2026-03-15 01:00:37] 2026-03-15 04:59:53,364 | INFO     | mean y: 2493606.2943189596
[2026-03-15 01:00:37] 2026-03-15 04:59:53,365 | INFO     | intersect: -1399086969.3867004
[2026-03-15 01:00:37] 2026-03-15 04:59:53,366 | INFO     | chi2: 2.70573223233822
[2026-03-15 01:00:37] 2026-03-15 04:59:53,367 | INFO     | current chi2=2.70573223233822 (change=57.52939004335911 %)
[2026-03-15 01:00:37] 2026-03-15 04:59:53,369 | INFO     | sum of square deviations: 957067980413.5979
[2026-03-15 01:00:37] 2026-03-15 04:59:53,547 | INFO     | PID=3084542 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 01:00:37] 2026-03-15 04:59:53,547 | INFO     | .. there are 42 such processes running
[2026-03-15 01:00:37] 2026-03-15 04:59:53,692 | INFO     | sum of deviations: 539383398769.09766
[2026-03-15 01:00:37] 2026-03-15 04:59:53,692 | INFO     | mean x: 1773506357.205357
[2026-03-15 01:00:37] 2026-03-15 04:59:53,693 | INFO     | mean y: 2497068.7053571427
[2026-03-15 01:00:37] 2026-03-15 04:59:53,693 | INFO     | intersect: -997013839.8871874
[2026-03-15 01:00:37] 2026-03-15 04:59:53,695 | INFO     | chi2: 1.804254518445878
[2026-03-15 01:00:37] 2026-03-15 04:59:53,695 | INFO     | current chi2=1.804254518445878 (change=33.31732915467801 %)
[2026-03-15 01:00:37] 2026-03-15 04:59:53,697 | INFO     | sum of square deviations: 947241494977.7534
[2026-03-15 01:00:37] 2026-03-15 04:59:54,249 | INFO     | sum of deviations: 404018184672.13904
[2026-03-15 01:00:37] 2026-03-15 04:59:54,250 | INFO     | mean x: 1773506509.705031
[2026-03-15 01:00:37] 2026-03-15 04:59:54,250 | INFO     | mean y: 2499169.350792557
[2026-03-15 01:00:37] 2026-03-15 04:59:54,250 | INFO     | intersect: -753938216.8429743
[2026-03-15 01:00:37] 2026-03-15 04:59:54,279 | INFO     | chi2: 1.5237023364928035
[2026-03-15 01:00:37] 2026-03-15 04:59:54,279 | INFO     | current chi2=1.5237023364928035 (change=15.549479249453807 %)
[2026-03-15 01:00:37] 2026-03-15 04:59:54,279 | INFO     | left removable region: 30
[2026-03-15 01:00:37] 2026-03-15 04:59:54,281 | INFO     | sum of square deviations: 906705811470.5942
[2026-03-15 01:00:37] 2026-03-15 04:59:54,712 | INFO     | monitor loop #3507: job 0:7045264656 is in state 'finished'
[2026-03-15 01:00:37] 2026-03-15 04:59:54,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 01:00:37] 2026-03-15 04:59:54,762 | INFO     | time since job start (89582s) is within the limit (345600.0s)
[2026-03-15 01:00:37] 2026-03-15 04:59:54,773 | INFO     | sum of deviations: 479387671777.21063
[2026-03-15 01:00:37] 2026-03-15 04:59:54,788 | INFO     | mean x: 1773506784.202098
[2026-03-15 01:00:37] 2026-03-15 04:59:54,788 | INFO     | mean y: 2503656.1965034967
[2026-03-15 01:00:37] 2026-03-15 04:59:54,789 | INFO     | intersect: -935173457.3766289
[2026-03-15 01:00:37] 2026-03-15 04:59:54,791 | INFO     | chi2: 0.015353508311515295
[2026-03-15 01:00:37] 2026-03-15 04:59:54,791 | INFO     | current memory leak: 0.53 B/s (using 1430 data points, chi2=0.02)
[2026-03-15 01:00:37] 2026-03-15 04:59:54,892 | INFO     | could have reported an average CPU frequency of 2899 MHz (53 samples)
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | ..............................
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | . Timing measurements:
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | . get job = 2 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | . initial setup = 58 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | . payload setup = 89 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,893 | INFO     | . stage-in = 0 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,894 | INFO     | . payload execution = 89452 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,894 | INFO     | . stage-out = 9 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,894 | INFO     | . log creation = 2 s
[2026-03-15 01:00:37] 2026-03-15 04:59:54,894 | INFO     | ..............................
[2026-03-15 01:00:37] 2026-03-15 04:59:56,412 | INFO     | 
[2026-03-15 01:00:37] 2026-03-15 04:59:56,412 | INFO     | job summary report
[2026-03-15 01:00:37] 2026-03-15 04:59:56,412 | INFO     | --------------------------------------------------
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | PanDA job id: 7045264656
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | task id: 48955010
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | errors: (none)
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | pilot state: finished 
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | transexitcode: 0
[2026-03-15 01:00:37] 2026-03-15 04:59:56,413 | INFO     | exeerrorcode: 0
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | exeerrordiag: 
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | exitcode: 0
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | exitmsg: OK
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | cpuconsumptiontime: 71045 s
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | nevents: 400
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | neventsw: 0
[2026-03-15 01:00:37] 2026-03-15 04:59:56,414 | INFO     | pid: 3108437
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | pgrp: 3108437
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | corecount: 8
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | event service: False
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | sizes: {0: 2279091, 1: 2279692, 2: 2279804, 3: 2280265, 15: 2280265, 89549: 2336787, 89550: 2336914, 89562: 2345968, 89563: 2346024, 89568: 2346314}
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | --------------------------------------------------
[2026-03-15 01:00:37] 2026-03-15 04:59:56,415 | INFO     | 
[2026-03-15 01:00:37] 2026-03-15 04:59:56,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-15 01:00:37] 2026-03-15 04:59:56,554 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,554 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,557 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 01:00:37] 2026-03-15 04:59:56,562 | INFO     | job 7045264656 has completed (purged errors)
[2026-03-15 01:00:37] 2026-03-15 04:59:56,562 | INFO     | overall cleanup function is called
[2026-03-15 01:00:37] 2026-03-15 04:59:57,572 | INFO     | --- collectZombieJob: --- 10, [3108437]
[2026-03-15 01:00:37] 2026-03-15 04:59:57,572 | INFO     | zombie collector waiting for pid 3108437
[2026-03-15 01:00:37] 2026-03-15 04:59:57,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 01:00:37] 2026-03-15 04:59:57,573 | INFO     | collected zombie processes
[2026-03-15 01:00:37] 2026-03-15 04:59:57,573 | INFO     | will attempt to kill all subprocesses of pid=3108437
[2026-03-15 01:00:37] 2026-03-15 05:00:00,870 | INFO     | process IDs to be killed: [3108437] (in reverse order)
[2026-03-15 01:00:37] 2026-03-15 05:00:01,515 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 01:00:37] 2026-03-15 05:00:01,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 01:00:37] 2026-03-15 05:00:01,697 | INFO     | did not find any defunct processes belonging to 3108437
[2026-03-15 01:00:37] 2026-03-15 05:00:01,789 | INFO     | did not find any defunct processes belonging to 3108437
[2026-03-15 01:00:37] 2026-03-15 05:00:01,790 | INFO     | ready for new job
[2026-03-15 01:00:37] 2026-03-15 05:00:01,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 01:00:37] 2026-03-15 05:00:01,795 | INFO     | **************************************
[2026-03-15 01:00:37] 2026-03-15 05:00:01,795 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 01:00:37] 2026-03-15 05:00:01,795 | INFO     | **************************************
[2026-03-15 01:00:37] 2026-03-15 05:00:01,795 | INFO     | 
[2026-03-15 01:00:37] 2026-03-15 05:00:01,797 | INFO     | architecture information:
[2026-03-15 01:00:37] 2026-03-15 05:00:01,798 | INFO     | executing command: cat /etc/os-release
[2026-03-15 01:00:37] 2026-03-15 05:00:01,920 | INFO     | cat /etc/os-release:
[2026-03-15 01:00:37] NAME="CentOS Linux"
[2026-03-15 01:00:37] VERSION="7 (Core)"
[2026-03-15 01:00:37] ID="centos"
[2026-03-15 01:00:37] ID_LIKE="rhel fedora"
[2026-03-15 01:00:37] VERSION_ID="7"
[2026-03-15 01:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 01:00:37] ANSI_COLOR="0;31"
[2026-03-15 01:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 01:00:37] HOME_URL="https://www.centos.org/"
[2026-03-15 01:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 01:00:37] 
[2026-03-15 01:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 01:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 01:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 01:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 01:00:37] 
[2026-03-15 01:00:37] 2026-03-15 05:00:01,941 | INFO     | **************************************
[2026-03-15 01:00:37] 2026-03-15 05:00:02,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-15 01:00:37] 2026-03-15 05:00:02,632 | INFO     | sufficient remaining disk space (51284803584 B)
[2026-03-15 01:00:37] 2026-03-15 05:00:02,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 01:00:37] 2026-03-15 05:00:02,633 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 01:00:37] 2026-03-15 05:00:02,633 | INFO     | update_server=False
[2026-03-15 01:00:37] 2026-03-15 05:00:02,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 01:00:37] 2026-03-15 05:00:02,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 01:00:37] 2026-03-15 05:00:02,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 01:00:37] 2026-03-15 05:00:02,656 | INFO     | all payload control threads have been joined
[2026-03-15 01:00:37] 2026-03-15 05:00:03,145 | INFO     | all data control threads have been joined
[2026-03-15 01:00:37] 2026-03-15 05:00:03,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 01:00:37] 2026-03-15 05:00:03,356 | INFO     | aborting loop
[2026-03-15 01:00:37] 2026-03-15 05:00:03,677 | INFO     | [payload] control thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:03,681 | INFO     | [job] retrieve thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:03,727 | INFO     | all job control threads have been joined
[2026-03-15 01:00:37] 2026-03-15 05:00:03,823 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:03,971 | INFO     | [payload] failed_post thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,151 | INFO     | [data] control thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,306 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,315 | INFO     | [data] copytool_in thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,357 | INFO     | [job] validate thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,364 | INFO     | [job] job monitor thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,448 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,687 | INFO     | [data] copytool_out thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:04,732 | INFO     | [job] control thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:05,011 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:05,171 | INFO     | [payload] validate_post thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:05,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 01:00:37] 2026-03-15 05:00:06,633 | INFO     | [job] queue monitor thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:06,689 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 01:00:37] 2026-03-15 05:00:13,539 | INFO     | [monitor] cgroup control has ended
[2026-03-15 01:00:37] 2026-03-15 05:00:13,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160569386816)>', '<ExcThread(monitor, started 140160167548672)>']
[2026-03-15 01:00:37] 2026-03-15 05:00:18,802 | INFO     | all workflow threads have been joined
[2026-03-15 01:00:37] 2026-03-15 05:00:18,821 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 01:00:37] 2026-03-15 05:00:18,822 | INFO     | traces error code: 0
[2026-03-15 01:00:37] 2026-03-15 05:00:18,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 01:00:37] 2026-03-15 05:00:33,232 | INFO     | PID=3084542 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 01:00:37] 2026-03-15 05:00:33,232 | INFO     | .. there are 42 such processes running
[2026-03-15 01:00:37] 2026-03-15 05:00:33,233 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 01:00:37] 2026-03-15 05:00:33,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 01:00:37] 2026-03-15 05:00:33,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 01:00:37] 2026-03-15 05:00:33,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 01:00:37] 2026-03-15 05:00:33,234 | INFO     | [monitor] control thread has ended
[2026-03-15 01:00:37] 2026-03-15 05:00:33,792 [wrapper] ==== pilot stdout END ====
[2026-03-15 01:00:37] 2026-03-15 05:00:33,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 01:00:37] 2026-03-15 05:00:33,927 [wrapper] pilotpid: 3084542
[2026-03-15 01:00:37] 2026-03-15 05:00:33,988 [wrapper] Pilot exit status: 0
[2026-03-15 01:00:37] 2026-03-15 05:00:34,153 [wrapper] pandaids: 7045264656
[2026-03-15 01:00:37] 2026-03-15 05:00:35,479 [wrapper] cleanup supervisor_pilot 3091483 3084543
[2026-03-15 01:00:37] 2026-03-15 05:00:35,520 [wrapper] Test setup, not cleaning
[2026-03-15 01:00:37] 2026-03-15 05:00:35,562 [wrapper] apfmon messages muted
[2026-03-15 01:00:37] 2026-03-15 05:00:35,638 [wrapper] ==== wrapper stdout END ====
[2026-03-15 01:00:37] 2026-03-15 05:00:35,689 [wrapper] ==== wrapper stderr END ====
[2026-03-15 01:00:37]  *** Error codes and diagnostics ***
[2026-03-15 01:00:37]     "exeErrorCode": 0,
[2026-03-15 01:00:37]     "exeErrorDiag": "",
[2026-03-15 01:00:37]     "pilotErrorCode": 0,
[2026-03-15 01:00:37]     "pilotErrorDiag": "",
[2026-03-15 01:00:37]  *** Listing of results directory ***
[2026-03-15 01:00:37] total 633612
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 19:38 pilot3.tar.gz
[2026-03-15 01:00:37] -rwx------. 1 boincer umatlas     36322 Mar 13 19:41 runpilot2-wrapper.sh
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 19:44 queuedata.json
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas       100 Mar 14 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 01:00:37] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 00:03 run_atlas
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas       105 Mar 14 00:03 job.xml
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas 442108019 Mar 14 00:03 EVNT.46701403._001694.pool.root.1
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:03 start_atlas.sh
[2026-03-15 01:00:37] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 00:03 shared
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas    597528 Mar 14 00:03 input.tar.gz
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas         0 Mar 14 00:03 boinc_lockfile
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 00:04 pandaJob.out
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas        57 Mar 14 00:04 setup.sh.local
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   1004579 Mar 14 00:05 agis_schedconf.cvmfs.json
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas       442 Mar 14 00:06 workernode_map.json
[2026-03-15 01:00:37] drwx------. 5 boincer umatlas      4096 Mar 14 00:06 pilot3
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      6524 Mar 15 00:55 init_data.xml
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas 183399238 Mar 15 00:56 HITS.48955010._034974.pool.root.1
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas       531 Mar 15 00:57 boinc_task_state.xml
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas      1039 Mar 15 00:59 memory_monitor_summary.json
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   1511579 Mar 15 00:59 agis_ddmendpoints.agis.ALL.json
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   1234439 Mar 15 00:59 log.48955010._034974.job.log.tgz.1
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas      5456 Mar 15 00:59 heartbeat.json
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 01:00 boinc_mmap_file
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas        27 Mar 15 01:00 wrapper_checkpoint.txt
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas        95 Mar 15 01:00 pilot_heartbeat.json
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas       823 Mar 15 01:00 pilotlog.txt
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   8460249 Mar 15 01:00 log.48955010._034974.job.log.1
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas       357 Mar 15 01:00 output.list
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas       620 Mar 15 01:00 runtime_log
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   9707520 Mar 15 01:00 result.tar.gz
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      9342 Mar 15 01:00 runtime_log.err
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas       659 Mar 15 01:00 QIGNDmCJRL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwcoLDmZ9g0Tn.diag
[2026-03-15 01:00:37] -rw-r--r--. 1 boincer umatlas      9583 Mar 15 01:00 stderr.txt
[2026-03-15 01:00:37] HITS file was successfully produced:
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas 183399238 Mar 15 00:56 shared/HITS.pool.root.1
[2026-03-15 01:00:37]  *** Contents of shared directory: ***
[2026-03-15 01:00:37] total 620940
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas 442108019 Mar 14 00:03 ATLAS.root_0
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 00:03 start_atlas.sh
[2026-03-15 01:00:37] -rw-r--r--. 2 boincer umatlas    597528 Mar 14 00:03 input.tar.gz
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas 183399238 Mar 15 00:56 HITS.pool.root.1
[2026-03-15 01:00:37] -rw-------. 1 boincer umatlas   9707520 Mar 15 01:00 result.tar.gz
01:00:38 (3067304): run_atlas exited; CPU time 75148.217886
01:00:38 (3067304): called boinc_finish(0)

</stderr_txt>
]]>

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