Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:25 (3395431): wrapper (7.7.26015): starting
09:49:25 (3395431): wrapper: running run_atlas (--nthreads 9)
[2026-03-14 09:49:25] Arguments: --nthreads 9
[2026-03-14 09:49:25] Threads: 9
[2026-03-14 09:49:25] Checking for CVMFS
[2026-03-14 09:49:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 09:49:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 09:49:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 09:49:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 09:49:28] 2.13.3.0 247178 36965 228300 157279 1 58 37329930 40960000 23764 16776704 0 62232028 99.696 42812408 33686 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-14 09:49:28] CVMFS is ok
[2026-03-14 09:49:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 09:49:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 09:49:28] Further information can be found at the LHC@home message board.
[2026-03-14 09:49:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:49:28] Checking for apptainer binary...
[2026-03-14 09:49:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 09:49:28] Running /usr/bin/apptainer --version
[2026-03-14 09:49:28] apptainer version 1.4.5-2.el9
[2026-03-14 09:49:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:49:29] c6-6-39-1.aglt2.org
[2026-03-14 09:49:29] apptainer works
[2026-03-14 09:49:29] Set ATHENA_PROC_NUMBER=9
[2026-03-14 09:49:29] Set ATHENA_CORE_NUMBER=9
[2026-03-14 09:49:29] Starting ATLAS job with PandaID=7045290752
[2026-03-14 09:49:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 17:33:13]  *** The last 200 lines of the pilot log: ***
[2026-03-14 17:33:13] 2026-03-14 21:32:25,594 | INFO     | job 7045290752 has state=finished
[2026-03-14 17:33:13] 2026-03-14 21:32:25,594 | INFO     | preparing for final server update for job 7045290752 in state='finished'
[2026-03-14 17:33:13] 2026-03-14 21:32:25,595 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7045290752/jobReport.json
[2026-03-14 17:33:13] 2026-03-14 21:32:25,597 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-14 17:33:13] 2026-03-14 21:32:25,597 | INFO     | this job has now completed (state=finished)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,597 | INFO     | log transfer has been attempted: DONE
[2026-03-14 17:33:13] 2026-03-14 21:32:25,597 | INFO     | job 7045290752 has finished - writing final server update
[2026-03-14 17:33:13] 2026-03-14 21:32:25,598 | INFO     | total number of processed events: 400 (read)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,619 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7045290752/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,619 | INFO     | extracted standard info from prmon json
[2026-03-14 17:33:13] 2026-03-14 21:32:25,619 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 17:33:13] 2026-03-14 21:32:25,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 17:33:13] 2026-03-14 21:32:25,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 17:33:13] 2026-03-14 21:32:25,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 17:33:13] 2026-03-14 21:32:25,634 | INFO     | fitting pss+swap vs Time
[2026-03-14 17:33:13] 2026-03-14 21:32:25,635 | INFO     | sum of square deviations: 28825202844.476765
[2026-03-14 17:33:13] 2026-03-14 21:32:25,642 | INFO     | sum of deviations: 121547011342.27812
[2026-03-14 17:33:13] 2026-03-14 21:32:25,646 | INFO     | mean x: 1773510129.397351
[2026-03-14 17:33:13] 2026-03-14 21:32:25,646 | INFO     | mean y: 2548407.898454746
[2026-03-14 17:33:13] 2026-03-14 21:32:25,647 | INFO     | intersect: -7475798127.130688
[2026-03-14 17:33:13] 2026-03-14 21:32:25,647 | INFO     | chi2: 3.0710475979010887
[2026-03-14 17:33:13] 2026-03-14 21:32:25,648 | INFO     | sum of square deviations: 27881277253.67861
[2026-03-14 17:33:13] 2026-03-14 21:32:25,656 | INFO     | sum of deviations: 148509792414.2322
[2026-03-14 17:33:13] 2026-03-14 21:32:25,656 | INFO     | mean x: 1773509976.9017856
[2026-03-14 17:33:13] 2026-03-14 21:32:25,656 | INFO     | mean y: 2552721.4598214286
[2026-03-14 17:33:13] 2026-03-14 21:32:25,656 | INFO     | intersect: -9444058928.280993
[2026-03-14 17:33:13] 2026-03-14 21:32:25,657 | INFO     | chi2: 2.387008853820943
[2026-03-14 17:33:13] 2026-03-14 21:32:25,657 | INFO     | current chi2=2.387008853820943 (change=22.273791671208638 %)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,657 | INFO     | right removable region: 447
[2026-03-14 17:33:13] 2026-03-14 21:32:25,657 | INFO     | sum of square deviations: 27881167453.678623
[2026-03-14 17:33:13] 2026-03-14 21:32:25,665 | INFO     | sum of deviations: 13764687032.33931
[2026-03-14 17:33:13] 2026-03-14 21:32:25,666 | INFO     | mean x: 1773510281.9017856
[2026-03-14 17:33:13] 2026-03-14 21:32:25,666 | INFO     | mean y: 2565771.3258928573
[2026-03-14 17:33:13] 2026-03-14 21:32:25,666 | INFO     | intersect: -873000648.89562
[2026-03-14 17:33:13] 2026-03-14 21:32:25,670 | INFO     | chi2: 0.7916482161920305
[2026-03-14 17:33:13] 2026-03-14 21:32:25,671 | INFO     | current chi2=0.7916482161920305 (change=74.2222094918658 %)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,671 | INFO     | sum of square deviations: 26958023952.478523
[2026-03-14 17:33:13] 2026-03-14 21:32:25,679 | INFO     | sum of deviations: -2825439042.347637
[2026-03-14 17:33:13] 2026-03-14 21:32:25,679 | INFO     | mean x: 1773510434.4018059
[2026-03-14 17:33:13] 2026-03-14 21:32:25,679 | INFO     | mean y: 2568501.934537246
[2026-03-14 17:33:13] 2026-03-14 21:32:25,679 | INFO     | intersect: 188448061.66054133
[2026-03-14 17:33:13] 2026-03-14 21:32:25,680 | INFO     | chi2: 0.7334288070455934
[2026-03-14 17:33:13] 2026-03-14 21:32:25,680 | INFO     | current chi2=0.7334288070455934 (change=7.354202025046283 %)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,680 | INFO     | left removable region: 20
[2026-03-14 17:33:13] 2026-03-14 21:32:25,681 | INFO     | sum of square deviations: 24141428858.519978
[2026-03-14 17:33:13] 2026-03-14 21:32:25,688 | INFO     | sum of deviations: 38662398148.1803
[2026-03-14 17:33:13] 2026-03-14 21:32:25,688 | INFO     | mean x: 1773510556.4004683
[2026-03-14 17:33:13] 2026-03-14 21:32:25,688 | INFO     | mean y: 2570626.098360656
[2026-03-14 17:33:13] 2026-03-14 21:32:25,688 | INFO     | intersect: -2837699171.244502
[2026-03-14 17:33:13] 2026-03-14 21:32:25,689 | INFO     | chi2: 0.013519010242333653
[2026-03-14 17:33:13] 2026-03-14 21:32:25,689 | INFO     | current memory leak: 1.60 B/s (using 427 data points, chi2=0.01)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,695 | INFO     | could have reported an average CPU frequency of 3053 MHz (19 samples)
[2026-03-14 17:33:13] 2026-03-14 21:32:25,695 | INFO     | ..............................
[2026-03-14 17:33:13] 2026-03-14 21:32:25,695 | INFO     | . Timing measurements:
[2026-03-14 17:33:13] 2026-03-14 21:32:25,695 | INFO     | . get job = 0 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,695 | INFO     | . initial setup = 41 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | . payload setup = 36 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | . stage-in = 0 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | . payload execution = 27618 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | . stage-out = 7 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | . log creation = 0 s
[2026-03-14 17:33:13] 2026-03-14 21:32:25,696 | INFO     | ..............................
[2026-03-14 17:33:13] 2026-03-14 21:32:26,279 | INFO     | 
[2026-03-14 17:33:13] 2026-03-14 21:32:26,279 | INFO     | job summary report
[2026-03-14 17:33:13] 2026-03-14 21:32:26,279 | INFO     | --------------------------------------------------
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | PanDA job id: 7045290752
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | task id: 48955010
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | errors: (none)
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | pilot state: finished 
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | transexitcode: 0
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | exeerrorcode: 0
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | exeerrordiag: 
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | exitcode: 0
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | exitmsg: OK
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | cpuconsumptiontime: 37700 s
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | nevents: 400
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | neventsw: 0
[2026-03-14 17:33:13] 2026-03-14 21:32:26,280 | INFO     | pid: 3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | pgrp: 3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | corecount: 9
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | event service: False
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | sizes: {0: 2279091, 1: 2280209, 2: 2280237, 27659: 2316882, 27666: 2325880, 27667: 2325936, 27670: 2326258}
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | --------------------------------------------------
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | 
[2026-03-14 17:33:13] 2026-03-14 21:32:26,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-14 17:33:13] 2026-03-14 21:32:26,340 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,340 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | job 7045290752 has completed (purged errors)
[2026-03-14 17:33:13] 2026-03-14 21:32:26,342 | INFO     | overall cleanup function is called
[2026-03-14 17:33:13] 2026-03-14 21:32:27,282 | INFO     | PID=3402652 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-14 17:33:13] 2026-03-14 21:32:27,282 | INFO     | .. there are 37 such processes running
[2026-03-14 17:33:13] 2026-03-14 21:32:27,399 | INFO     | --- collectZombieJob: --- 10, [3414344]
[2026-03-14 17:33:13] 2026-03-14 21:32:27,399 | INFO     | zombie collector waiting for pid 3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:27,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 17:33:13] 2026-03-14 21:32:27,400 | INFO     | collected zombie processes
[2026-03-14 17:33:13] 2026-03-14 21:32:27,400 | INFO     | will attempt to kill all subprocesses of pid=3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:28,057 | INFO     | process IDs to be killed: [3414344] (in reverse order)
[2026-03-14 17:33:13] 2026-03-14 21:32:28,494 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 17:33:13] 2026-03-14 21:32:28,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 17:33:13] 2026-03-14 21:32:28,510 | INFO     | did not find any defunct processes belonging to 3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:28,525 | INFO     | did not find any defunct processes belonging to 3414344
[2026-03-14 17:33:13] 2026-03-14 21:32:28,525 | INFO     | ready for new job
[2026-03-14 17:33:13] 2026-03-14 21:32:28,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 17:33:13] 2026-03-14 21:32:28,528 | INFO     | **************************************
[2026-03-14 17:33:13] 2026-03-14 21:32:28,529 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 17:33:13] 2026-03-14 21:32:28,529 | INFO     | **************************************
[2026-03-14 17:33:13] 2026-03-14 21:32:28,529 | INFO     | 
[2026-03-14 17:33:13] 2026-03-14 21:32:28,570 | INFO     | architecture information:
[2026-03-14 17:33:13] 2026-03-14 21:32:28,590 | INFO     | executing command: cat /etc/os-release
[2026-03-14 17:33:13] 2026-03-14 21:32:28,686 | INFO     | cat /etc/os-release:
[2026-03-14 17:33:13] NAME="CentOS Linux"
[2026-03-14 17:33:13] VERSION="7 (Core)"
[2026-03-14 17:33:13] ID="centos"
[2026-03-14 17:33:13] ID_LIKE="rhel fedora"
[2026-03-14 17:33:13] VERSION_ID="7"
[2026-03-14 17:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 17:33:13] ANSI_COLOR="0;31"
[2026-03-14 17:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 17:33:13] HOME_URL="https://www.centos.org/"
[2026-03-14 17:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 17:33:13] 
[2026-03-14 17:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 17:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 17:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 17:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 17:33:13] 
[2026-03-14 17:33:13] 2026-03-14 21:32:28,687 | INFO     | **************************************
[2026-03-14 17:33:13] 2026-03-14 21:32:29,189 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-14 17:33:13] 2026-03-14 21:32:29,302 | INFO     | sufficient remaining disk space (73874276352 B)
[2026-03-14 17:33:13] 2026-03-14 21:32:29,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 17:33:13] 2026-03-14 21:32:29,302 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 17:33:13] 2026-03-14 21:32:29,302 | INFO     | update_server=False
[2026-03-14 17:33:13] 2026-03-14 21:32:29,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 17:33:13] 2026-03-14 21:32:29,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:33:13] 2026-03-14 21:32:29,307 | INFO     | aborting loop
[2026-03-14 17:33:13] 2026-03-14 21:32:29,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 17:33:13] 2026-03-14 21:32:29,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 17:33:13] 2026-03-14 21:32:29,458 | INFO     | all job control threads have been joined
[2026-03-14 17:33:13] 2026-03-14 21:32:30,032 | INFO     | all data control threads have been joined
[2026-03-14 17:33:13] 2026-03-14 21:32:30,312 | INFO     | [job] job monitor thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:30,318 | INFO     | [job] retrieve thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:30,384 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:30,385 | INFO     | [job] validate thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:30,481 | INFO     | [job] control thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:30,500 | INFO     | all payload control threads have been joined
[2026-03-14 17:33:13] 2026-03-14 21:32:31,038 | INFO     | [data] control thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,301 | INFO     | [payload] failed_post thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,313 | INFO     | [data] copytool_out thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,398 | INFO     | [payload] validate_post thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,403 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 17:33:13] 2026-03-14 21:32:31,506 | INFO     | [payload] control thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,738 | INFO     | [data] copytool_in thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:31,773 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:32,409 | INFO     | [job] queue monitor thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:32:33,393 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 17:33:13] 2026-03-14 21:33:00,148 | INFO     | PID=3402652 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 17:33:13] 2026-03-14 21:33:00,148 | INFO     | .. there are 37 such processes running
[2026-03-14 17:33:13] 2026-03-14 21:33:00,165 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 17:33:13] 2026-03-14 21:33:00,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 17:33:13] 2026-03-14 21:33:00,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 17:33:13] 2026-03-14 21:33:05,601 | INFO     | [monitor] cgroup control has ended
[2026-03-14 17:33:13] 2026-03-14 21:33:06,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386515068736)>', '<ExcThread(monitor, started 140386123093760)>']
[2026-03-14 17:33:13] 2026-03-14 21:33:06,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 17:33:13] 2026-03-14 21:33:06,201 | INFO     | [monitor] control thread has ended
[2026-03-14 17:33:13] 2026-03-14 21:33:11,053 | INFO     | all workflow threads have been joined
[2026-03-14 17:33:13] 2026-03-14 21:33:11,053 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 17:33:13] 2026-03-14 21:33:11,054 | INFO     | traces error code: 0
[2026-03-14 17:33:13] 2026-03-14 21:33:11,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 17:33:13] 2026-03-14 21:33:12,233 [wrapper] ==== pilot stdout END ====
[2026-03-14 17:33:13] 2026-03-14 21:33:12,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 17:33:13] 2026-03-14 21:33:12,285 [wrapper] pilotpid: 3402652
[2026-03-14 17:33:13] 2026-03-14 21:33:12,334 [wrapper] Pilot exit status: 0
[2026-03-14 17:33:13] 2026-03-14 21:33:12,489 [wrapper] pandaids: 7045290752
[2026-03-14 17:33:13] 2026-03-14 21:33:13,033 [wrapper] cleanup supervisor_pilot  366274 3402653
[2026-03-14 17:33:13] 2026-03-14 21:33:13,040 [wrapper] Test setup, not cleaning
[2026-03-14 17:33:13] 2026-03-14 21:33:13,088 [wrapper] apfmon messages muted
[2026-03-14 17:33:13] 2026-03-14 21:33:13,137 [wrapper] ==== wrapper stdout END ====
[2026-03-14 17:33:13] 2026-03-14 21:33:13,140 [wrapper] ==== wrapper stderr END ====
[2026-03-14 17:33:13]  *** Error codes and diagnostics ***
[2026-03-14 17:33:13]     "exeErrorCode": 0,
[2026-03-14 17:33:13]     "exeErrorDiag": "",
[2026-03-14 17:33:13]     "pilotErrorCode": 0,
[2026-03-14 17:33:13]     "pilotErrorDiag": "",
[2026-03-14 17:33:13]  *** Listing of results directory ***
[2026-03-14 17:33:13] total 626620
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas    585013 Mar 13 19:38 pilot3.tar.gz
[2026-03-14 17:33:13] -rwx------. 1 boincer umatlas     36322 Mar 13 19:38 runpilot2-wrapper.sh
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas      5111 Mar 13 19:39 queuedata.json
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas       100 Mar 14 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 17:33:13] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 14 09:49 run_atlas
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas       105 Mar 14 09:49 job.xml
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas 440503819 Mar 14 09:49 EVNT.46701403._001713.pool.root.1
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 09:49 start_atlas.sh
[2026-03-14 17:33:13] drwxrwx--x. 2 boincer umatlas      4096 Mar 14 09:49 shared
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas    597531 Mar 14 09:49 input.tar.gz
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas         0 Mar 14 09:49 boinc_lockfile
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas      2564 Mar 14 09:49 pandaJob.out
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas        57 Mar 14 09:49 setup.sh.local
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas   1004579 Mar 14 09:50 agis_schedconf.cvmfs.json
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas       442 Mar 14 09:51 workernode_map.json
[2026-03-14 17:33:13] drwx------. 5 boincer umatlas      4096 Mar 14 09:51 pilot3
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas      6843 Mar 14 17:29 init_data.xml
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas 189021644 Mar 14 17:31 HITS.48955010._035928.pool.root.1
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas       532 Mar 14 17:31 boinc_task_state.xml
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas        95 Mar 14 17:32 pilot_heartbeat.json
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas      1040 Mar 14 17:32 memory_monitor_summary.json
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas   1511579 Mar 14 17:32 agis_ddmendpoints.agis.ALL.json
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas    665590 Mar 14 17:32 log.48955010._035928.job.log.tgz.1
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas      6392 Mar 14 17:32 heartbeat.json
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas      8192 Mar 14 17:32 boinc_mmap_file
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas        28 Mar 14 17:32 wrapper_checkpoint.txt
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas      4820 Mar 14 17:33 pilotlog.txt
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas   3433611 Mar 14 17:33 log.48955010._035928.job.log.1
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas       357 Mar 14 17:33 output.list
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas       620 Mar 14 17:33 runtime_log
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas   4116480 Mar 14 17:33 result.tar.gz
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas      9347 Mar 14 17:33 runtime_log.err
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas       657 Mar 14 17:33 4FkKDmtGRL9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoboLDmh2Kn1m.diag
[2026-03-14 17:33:13] -rw-r--r--. 1 boincer umatlas     21349 Mar 14 17:33 stderr.txt
[2026-03-14 17:33:13] HITS file was successfully produced:
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas 189021644 Mar 14 17:31 shared/HITS.pool.root.1
[2026-03-14 17:33:13]  *** Contents of shared directory: ***
[2026-03-14 17:33:13] total 619396
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas 440503819 Mar 14 09:49 ATLAS.root_0
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas     15845 Mar 14 09:49 start_atlas.sh
[2026-03-14 17:33:13] -rw-r--r--. 2 boincer umatlas    597531 Mar 14 09:49 input.tar.gz
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas 189021644 Mar 14 17:31 HITS.pool.root.1
[2026-03-14 17:33:13] -rw-------. 1 boincer umatlas   4116480 Mar 14 17:33 result.tar.gz
17:33:14 (3395431): run_atlas exited; CPU time 38839.387180
17:33:14 (3395431): called boinc_finish(0)

</stderr_txt>
]]>

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