Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:15 (200040): wrapper (7.7.26015): starting
10:41:15 (200040): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 10:41:15] Arguments: --nthreads 3
[2026-03-14 10:41:15] Threads: 3
[2026-03-14 10:41:15] Checking for CVMFS
[2026-03-14 10:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:41:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:41:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:41:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:41:16] 2.9.2.0 2962 1391 59680 157272 0 50 22483931 36864001 0 130560 0 557764 99.982 56061 11462 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 10:41:16] CVMFS is ok
[2026-03-14 10:41:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:41:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:41:16] Further information can be found at the LHC@home message board.
[2026-03-14 10:41:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:41:16] Checking for apptainer binary...
[2026-03-14 10:41:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:41:16] Running /usr/bin/apptainer --version
[2026-03-14 10:41:16] apptainer version 1.4.1-1.1
[2026-03-14 10:41:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:41:16] cosA121
[2026-03-14 10:41:16] apptainer works
[2026-03-14 10:41:16] Set ATHENA_PROC_NUMBER=3
[2026-03-14 10:41:16] Set ATHENA_CORE_NUMBER=3
[2026-03-14 10:41:16] Starting ATLAS job with PandaID=7044892997
[2026-03-14 10:41:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 12:10:10]  *** The last 200 lines of the pilot log: ***
[2026-03-14 12:10:10] 2026-03-14 11:09:38,672 | INFO     | **************************************
[2026-03-14 12:10:10] 2026-03-14 11:09:38,672 | INFO     | 
[2026-03-14 12:10:10] 2026-03-14 11:09:38,673 | INFO     | architecture information:
[2026-03-14 12:10:10] 2026-03-14 11:09:38,673 | INFO     | executing command: cat /etc/os-release
[2026-03-14 12:10:10] 2026-03-14 11:09:38,682 | INFO     | cat /etc/os-release:
[2026-03-14 12:10:10] NAME="CentOS Linux"
[2026-03-14 12:10:10] VERSION="7 (Core)"
[2026-03-14 12:10:10] ID="centos"
[2026-03-14 12:10:10] ID_LIKE="rhel fedora"
[2026-03-14 12:10:10] VERSION_ID="7"
[2026-03-14 12:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 12:10:10] ANSI_COLOR="0;31"
[2026-03-14 12:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 12:10:10] HOME_URL="https://www.centos.org/"
[2026-03-14 12:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 12:10:10] 
[2026-03-14 12:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 12:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 12:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 12:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 12:10:10] 
[2026-03-14 12:10:10] 2026-03-14 11:09:38,682 | INFO     | **************************************
[2026-03-14 12:10:10] 2026-03-14 11:09:39,186 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | INFO     | sufficient remaining disk space (335965847552 B)
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | INFO     | update_server=False
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 12:10:10] 2026-03-14 11:09:39,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:10:10] 2026-03-14 11:09:39,215 | INFO     | all job control threads have been joined
[2026-03-14 12:10:10] 2026-03-14 11:09:39,381 | INFO     | all data control threads have been joined
[2026-03-14 12:10:10] 2026-03-14 11:09:39,545 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-14 12:10:10] 2026-03-14 11:09:39,545 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-14 12:10:10] 2026-03-14 11:09:39,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 12:10:10] 2026-03-14 11:09:39,546 | INFO     | will abort loop
[2026-03-14 12:10:10] 2026-03-14 11:09:39,666 | INFO     | all payload control threads have been joined
[2026-03-14 12:10:10] 2026-03-14 11:09:39,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 12:10:10] 2026-03-14 11:09:39,833 | INFO     | [monitor] cgroup control has ended
[2026-03-14 12:10:10] 2026-03-14 11:09:40,206 | INFO     | [job] queue monitor thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,206 | INFO     | [job] retrieve thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,221 | INFO     | [job] control thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,384 | INFO     | [payload] validate_post thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,386 | INFO     | [data] control thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,551 | INFO     | [job] job monitor thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,568 | INFO     | [job] validate thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,672 | INFO     | [payload] control thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,792 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,810 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,867 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,870 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:40,940 | INFO     | [data] copytool_in thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:41,376 | INFO     | [payload] failed_post thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:41,811 | INFO     | [data] copytool_out thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:42,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 12:10:10] 2026-03-14 11:09:46,149 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 12:10:10] 2026-03-14 11:09:46,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764349642560)>', '<ExcThread(monitor, started 139763713558272)>']
[2026-03-14 12:10:10] 2026-03-14 11:09:51,345 | INFO     | all workflow threads have been joined
[2026-03-14 12:10:10] 2026-03-14 11:09:51,345 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 12:10:10] 2026-03-14 11:09:51,346 | INFO     | traces error code: 0
[2026-03-14 12:10:10] 2026-03-14 11:09:51,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 12:10:10] 2026-03-14 11:10:10,297 | INFO     | PID=204084 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-14 12:10:10] 2026-03-14 11:10:10,298 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 12:10:10] 2026-03-14 11:10:10,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 12:10:10] 2026-03-14 11:10:10,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 12:10:10] 2026-03-14 11:10:10,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 12:10:10] 2026-03-14 11:10:10,298 | INFO     | [monitor] control thread has ended
[2026-03-14 12:10:10] 2026-03-14 11:10:10,342 [wrapper] ==== pilot stdout END ====
[2026-03-14 12:10:10] 2026-03-14 11:10:10,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 12:10:10] 2026-03-14 11:10:10,348 [wrapper] pilotpid: 204084
[2026-03-14 12:10:10] 2026-03-14 11:10:10,351 [wrapper] Pilot exit status: 0
[2026-03-14 12:10:10] 2026-03-14 11:10:10,360 [wrapper] pandaids: 7044892997
[2026-03-14 12:10:10] 2026-03-14 11:10:10,378 [wrapper] cleanup supervisor_pilot  214151 204085
[2026-03-14 12:10:10] 2026-03-14 11:10:10,381 [wrapper] Test setup, not cleaning
[2026-03-14 12:10:10] 2026-03-14 11:10:10,383 [wrapper] apfmon messages muted
[2026-03-14 12:10:10] 2026-03-14 11:10:10,386 [wrapper] ==== wrapper stdout END ====
[2026-03-14 12:10:10] 2026-03-14 11:10:10,389 [wrapper] ==== wrapper stderr END ====
[2026-03-14 12:10:10]  *** Error codes and diagnostics ***
[2026-03-14 12:10:10]     "exeErrorCode": 0,
[2026-03-14 12:10:10]     "exeErrorDiag": "",
[2026-03-14 12:10:10]     "pilotErrorCode": 0,
[2026-03-14 12:10:10]     "pilotErrorDiag": "",
[2026-03-14 12:10:10]  *** Listing of results directory ***
[2026-03-14 12:10:10] total 621408
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc    585013 Mar 13 19:59 pilot3.tar.gz
[2026-03-14 12:10:10] -rwx------ 1 boinc boinc     36322 Mar 13 20:03 runpilot2-wrapper.sh
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      5111 Mar 13 20:04 queuedata.json
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc       100 Mar 14 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 12:10:10] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 10:41 run_atlas
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc       105 Mar 14 10:41 job.xml
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc 443472407 Mar 14 10:41 EVNT.46701403._002444.pool.root.1
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc    597531 Mar 14 10:41 input.tar.gz
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:41 start_atlas.sh
[2026-03-14 12:10:10] drwxrwx--x 2 boinc boinc      4096 Mar 14 10:41 shared
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:41 boinc_setup_complete
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      6197 Mar 14 10:41 init_data.xml
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:41 boinc_lockfile
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      2572 Mar 14 10:41 pandaJob.out
[2026-03-14 12:10:10] -rw------- 1 boinc boinc   1004579 Mar 14 10:41 agis_schedconf.cvmfs.json
[2026-03-14 12:10:10] -rw------- 1 boinc boinc   1511579 Mar 14 10:41 agis_ddmendpoints.agis.ALL.json
[2026-03-14 12:10:10] -rw------- 1 boinc boinc       427 Mar 14 10:41 workernode_map.json
[2026-03-14 12:10:10] drwx------ 5 boinc boinc      4096 Mar 14 10:41 pilot3
[2026-03-14 12:10:10] -rw------- 1 boinc boinc 186796230 Mar 14 12:09 HITS.48955015._019454.pool.root.1
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc       531 Mar 14 12:09 boinc_task_state.xml
[2026-03-14 12:10:10] -rw------- 1 boinc boinc      1046 Mar 14 12:09 memory_monitor_summary.json
[2026-03-14 12:10:10] -rw------- 1 boinc boinc    294701 Mar 14 12:09 log.48955015._019454.job.log.tgz.1
[2026-03-14 12:10:10] -rw------- 1 boinc boinc      6359 Mar 14 12:09 heartbeat.json
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc        27 Mar 14 12:09 wrapper_checkpoint.txt
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      8192 Mar 14 12:09 boinc_mmap_file
[2026-03-14 12:10:10] -rw------- 1 boinc boinc       746 Mar 14 12:10 pilotlog.txt
[2026-03-14 12:10:10] -rw------- 1 boinc boinc        95 Mar 14 12:10 pilot_heartbeat.json
[2026-03-14 12:10:10] -rw------- 1 boinc boinc    770818 Mar 14 12:10 log.48955015._019454.job.log.1
[2026-03-14 12:10:10] -rw------- 1 boinc boinc       357 Mar 14 12:10 output.list
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc       620 Mar 14 12:10 runtime_log
[2026-03-14 12:10:10] -rw------- 1 boinc boinc   1085440 Mar 14 12:10 result.tar.gz
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      8901 Mar 14 12:10 runtime_log.err
[2026-03-14 12:10:10] -rw------- 1 boinc boinc       662 Mar 14 12:10 r5JLDmjyML9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8aqLDmuSS0Hm.diag
[2026-03-14 12:10:10] -rw-r--r-- 1 boinc boinc      9350 Mar 14 12:10 stderr.txt
[2026-03-14 12:10:10] HITS file was successfully produced:
[2026-03-14 12:10:10] -rw------- 1 boinc boinc 186796230 Mar 14 12:09 shared/HITS.pool.root.1
[2026-03-14 12:10:10]  *** Contents of shared directory: ***
[2026-03-14 12:10:10] total 617168
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc 443472407 Mar 14 10:41 ATLAS.root_0
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc    597531 Mar 14 10:41 input.tar.gz
[2026-03-14 12:10:10] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:41 start_atlas.sh
[2026-03-14 12:10:10] -rw------- 1 boinc boinc 186796230 Mar 14 12:09 HITS.pool.root.1
[2026-03-14 12:10:10] -rw------- 1 boinc boinc   1085440 Mar 14 12:10 result.tar.gz
12:10:12 (200040): run_atlas exited; CPU time 14822.646018
12:10:12 (200040): called boinc_finish(0)

</stderr_txt>
]]>

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