Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:48:57 (3083317): wrapper (7.7.26015): starting
16:48:57 (3083317): wrapper: running run_atlas (--nthreads 4)
[2026-03-15 16:48:57] Arguments: --nthreads 4
[2026-03-15 16:48:57] Threads: 4
[2026-03-15 16:48:57] Checking for CVMFS
[2026-03-15 16:48:57] No cvmfs_config command found, will try listing directly
[2026-03-15 16:48:57] CVMFS is ok
[2026-03-15 16:48:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-15 16:48:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-15 16:48:57] Further information can be found at the LHC@home message board.
[2026-03-15 16:48:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 16:48:57] Checking for apptainer binary...
[2026-03-15 16:48:57] which: no apptainer in ((null))
[2026-03-15 16:48:57] apptainer is not installed, using version from CVMFS
[2026-03-15 16:48:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 16:48:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot232/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-15 16:48:57] apptainer works
[2026-03-15 16:48:57] Set ATHENA_PROC_NUMBER=4
[2026-03-15 16:48:57] Set ATHENA_CORE_NUMBER=4
[2026-03-15 16:48:57] Starting ATLAS job with PandaID=7045263915
[2026-03-15 16:48:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot232/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:08:58]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:08:58]  direct_access_lan=False
[2026-03-15 18:08:58]  direct_access_wan=False
[2026-03-15 18:08:58]  domain=
[2026-03-15 18:08:58]  filesize=305526
[2026-03-15 18:08:58]  filetype=log
[2026-03-15 18:08:58]  guid=6a7fe186-efcb-43b4-b2cb-a3af513a617e
[2026-03-15 18:08:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-15 18:08:58]  is_altstaged=None
[2026-03-15 18:08:58]  is_tar=False
[2026-03-15 18:08:58]  lfn=log.48955010._034833.job.log.tgz.1
[2026-03-15 18:08:58]  mtime=0
[2026-03-15 18:08:58]  protocol_id=None
[2026-03-15 18:08:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-15 18:08:58]  replicas=None
[2026-03-15 18:08:58]  scope=mc23_13p6TeV
[2026-03-15 18:08:58]  status=None
[2026-03-15 18:08:58]  status_code=0
[2026-03-15 18:08:58]  storage_token=
[2026-03-15 18:08:58]  surl=/var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7045263915/log.48955010._034833.job.log.tgz.1
[2026-03-15 18:08:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/9c/log.48955010._034833.job.log.tgz.1
[2026-03-15 18:08:58]  workdir=None
[2026-03-15 18:08:58] ]
[2026-03-15 18:08:58] 2026-03-15 17:06:41,809 | INFO     | transferring file log.48955010._034833.job.log.tgz.1 from /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7045263915/log.48955010._034833.job.log.tgz.1 to /var/lib/
[2026-03-15 18:08:58] 2026-03-15 17:06:41,810 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7045263915/log.48955010._034833.job.log.tgz.1 /var/lib/boinc/var/slot232/slots/0/
[2026-03-15 18:08:58] 2026-03-15 17:06:41,828 | INFO     | adding to output.list: log.48955010._034833.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/9c/log.48955010._034833.job.log.tg
[2026-03-15 18:08:58] 2026-03-15 17:06:41,829 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-15 18:08:58] 2026-03-15 17:06:41,829 | INFO     | summary of transferred files:
[2026-03-15 18:08:58] 2026-03-15 17:06:41,829 | INFO     |  -- lfn=log.48955010._034833.job.log.tgz.1, status_code=0, status=transferred
[2026-03-15 18:08:58] 2026-03-15 17:06:41,829 | INFO     | stage-out finished correctly
[2026-03-15 18:08:58] 2026-03-15 17:06:41,884 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-15 18:08:58] 2026-03-15 17:06:41,935 | INFO     | job 7045263915 has state=finished
[2026-03-15 18:08:58] 2026-03-15 17:06:41,935 | INFO     | preparing for final server update for job 7045263915 in state='finished'
[2026-03-15 18:08:58] 2026-03-15 17:06:41,935 | INFO     | reading metadata from: /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7045263915/jobReport.json
[2026-03-15 18:08:58] 2026-03-15 17:06:41,937 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot232/slots/0/workernode_map.json
[2026-03-15 18:08:58] 2026-03-15 17:06:41,937 | INFO     | this job has now completed (state=finished)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,937 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,937 | INFO     | log transfer has been attempted: DONE
[2026-03-15 18:08:58] 2026-03-15 17:06:41,937 | INFO     | job 7045263915 has finished - writing final server update
[2026-03-15 18:08:58] 2026-03-15 17:06:41,938 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_867338/.job.ad'
[2026-03-15 18:08:58] 2026-03-15 17:06:41,938 | INFO     | total number of processed events: 400 (read)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,955 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7045263915/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,955 | INFO     | extracted standard info from prmon json
[2026-03-15 18:08:58] 2026-03-15 17:06:41,955 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:08:58] 2026-03-15 17:06:41,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:08:58] 2026-03-15 17:06:41,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:08:58] 2026-03-15 17:06:41,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | sum of square deviations: 101843770.0
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | sum of deviations: -9848022.999999993
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | mean x: 1773592150.0
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | mean y: 2333070.5507246377
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | intersect: 173834737.13101164
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | chi2: 0.00033008395073425847
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | current memory leak: -0.10 B/s (using 69 data points, chi2=0.00)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | could have reported an average CPU frequency of 3534 MHz (6 samples)
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | ..............................
[2026-03-15 18:08:58] 2026-03-15 17:06:41,957 | INFO     | . Timing measurements:
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . get job = 0 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . initial setup = 5 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . payload setup = 5 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . stage-in = 0 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . payload execution = 4629 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . stage-out = 0 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | . log creation = 0 s
[2026-03-15 18:08:58] 2026-03-15 17:06:41,958 | INFO     | ..............................
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | 
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | job summary report
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | --------------------------------------------------
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | PanDA job id: 7045263915
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | task id: 48955010
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | errors: (none)
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:08:58] 2026-03-15 17:06:42,007 | INFO     | pilot state: finished 
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | transexitcode: 0
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | exeerrorcode: 0
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | exeerrordiag: 
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | exitcode: 0
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | exitmsg: OK
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | cpuconsumptiontime: 17703 s
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | nevents: 400
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | neventsw: 0
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | pid: 3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | pgrp: 3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | corecount: 4
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | event service: False
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | sizes: {0: 2279760, 1: 2280221, 11: 2280221, 4638: 2306452, 4641: 2315668}
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | --------------------------------------------------
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | 
[2026-03-15 18:08:58] 2026-03-15 17:06:42,008 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot232/slots/0
[2026-03-15 18:08:58] 2026-03-15 17:06:42,028 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | job 7045263915 has completed (purged errors)
[2026-03-15 18:08:58] 2026-03-15 17:06:42,029 | INFO     | overall cleanup function is called
[2026-03-15 18:08:58] 2026-03-15 17:06:43,038 | INFO     | --- collectZombieJob: --- 10, [3094082]
[2026-03-15 18:08:58] 2026-03-15 17:06:43,038 | INFO     | zombie collector waiting for pid 3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:43,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:08:58] 2026-03-15 17:06:43,038 | INFO     | collected zombie processes
[2026-03-15 18:08:58] 2026-03-15 17:06:43,038 | INFO     | will attempt to kill all subprocesses of pid=3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:43,549 | INFO     | process IDs to be killed: [3094082] (in reverse order)
[2026-03-15 18:08:58] 2026-03-15 17:06:43,773 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:08:58] 2026-03-15 17:06:43,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:08:58] 2026-03-15 17:06:43,805 | INFO     | did not find any defunct processes belonging to 3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:43,837 | INFO     | did not find any defunct processes belonging to 3094082
[2026-03-15 18:08:58] 2026-03-15 17:06:43,838 | INFO     | ready for new job
[2026-03-15 18:08:58] 2026-03-15 17:06:43,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:08:58] 2026-03-15 17:06:43,840 | INFO     | **************************************
[2026-03-15 18:08:58] 2026-03-15 17:06:43,840 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 18:08:58] 2026-03-15 17:06:43,840 | INFO     | **************************************
[2026-03-15 18:08:58] 2026-03-15 17:06:43,840 | INFO     | 
[2026-03-15 18:08:58] 2026-03-15 17:06:43,847 | INFO     | architecture information:
[2026-03-15 18:08:58] 2026-03-15 17:06:43,847 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:08:58] 2026-03-15 17:06:43,862 | INFO     | cat /etc/os-release:
[2026-03-15 18:08:58] NAME="CentOS Linux"
[2026-03-15 18:08:58] VERSION="7 (Core)"
[2026-03-15 18:08:58] ID="centos"
[2026-03-15 18:08:58] ID_LIKE="rhel fedora"
[2026-03-15 18:08:58] VERSION_ID="7"
[2026-03-15 18:08:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:08:58] ANSI_COLOR="0;31"
[2026-03-15 18:08:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:08:58] HOME_URL="https://www.centos.org/"
[2026-03-15 18:08:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:08:58] 
[2026-03-15 18:08:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:08:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:08:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:08:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:08:58] 
[2026-03-15 18:08:58] 2026-03-15 17:06:43,862 | INFO     | **************************************
[2026-03-15 18:08:58] 2026-03-15 17:06:44,365 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | INFO     | sufficient remaining disk space (171529207808 B)
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | INFO     | update_server=False
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:08:58] 2026-03-15 17:06:44,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:08:58] 2026-03-15 17:06:44,827 | INFO     | all data control threads have been joined
[2026-03-15 18:08:58] 2026-03-15 17:06:44,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:08:58] 2026-03-15 17:06:44,827 | INFO     | aborting loop
[2026-03-15 18:08:58] 2026-03-15 17:06:44,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:08:58] 2026-03-15 17:06:45,381 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,389 | INFO     | all job control threads have been joined
[2026-03-15 18:08:58] 2026-03-15 17:06:45,419 | INFO     | all payload control threads have been joined
[2026-03-15 18:08:58] 2026-03-15 17:06:45,472 | INFO     | [job] validate thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,588 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,603 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,812 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,832 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,833 | INFO     | [data] control thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:45,997 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,025 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,395 | INFO     | [job] control thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,424 | INFO     | [payload] control thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,710 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:46,900 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:47,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:08:58] 2026-03-15 17:06:48,052 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:06:48,387 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:08:58] 2026-03-15 17:07:14,600 | INFO     | PID=3088279 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:08:58] 2026-03-15 17:07:14,600 | INFO     | .. there are 46 such processes running
[2026-03-15 18:08:58] 2026-03-15 17:07:14,601 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:08:58] 2026-03-15 17:07:14,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:08:58] 2026-03-15 17:07:14,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:08:58] 2026-03-15 17:07:17,836 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:08:58] 2026-03-15 17:07:19,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23151414245184)>', '<ExcThread(monitor, started 23151173179136)>']
[2026-03-15 18:08:58] 2026-03-15 17:07:19,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:08:58] 2026-03-15 17:07:19,626 | INFO     | [monitor] control thread has ended
[2026-03-15 18:08:58] 2026-03-15 17:07:24,040 | INFO     | all workflow threads have been joined
[2026-03-15 18:08:58] 2026-03-15 17:07:24,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:08:58] 2026-03-15 17:07:24,041 | INFO     | traces error code: 0
[2026-03-15 18:08:58] 2026-03-15 17:07:24,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:08:58] 2026-03-15 17:07:24,180 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:08:58] 2026-03-15 17:07:24,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:08:58] 2026-03-15 17:07:24,186 [wrapper] pilotpid: 3088279
[2026-03-15 18:08:58] 2026-03-15 17:07:24,188 [wrapper] Pilot exit status: 0
[2026-03-15 18:08:58] 2026-03-15 17:07:24,200 [wrapper] pandaids: 7045263915
[2026-03-15 18:08:58] 2026-03-15 17:07:24,335 [wrapper] cleanup supervisor_pilot 3810541 3088280
[2026-03-15 18:08:58] 2026-03-15 17:07:24,337 [wrapper] Test setup, not cleaning
[2026-03-15 18:08:58] 2026-03-15 17:07:24,340 [wrapper] apfmon messages muted
[2026-03-15 18:08:58] 2026-03-15 17:07:24,342 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:08:58] 2026-03-15 17:07:24,345 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:08:58]  *** Error codes and diagnostics ***
[2026-03-15 18:08:58]     "exeErrorCode": 0,
[2026-03-15 18:08:58]     "exeErrorDiag": "",
[2026-03-15 18:08:58]     "pilotErrorCode": 0,
[2026-03-15 18:08:58]     "pilotErrorDiag": "",
[2026-03-15 18:08:58]  *** Listing of results directory ***
[2026-03-15 18:08:58] total 612864
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc    585013 Mar 14 00:38 pilot3.tar.gz
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc      5111 Mar 14 00:38 queuedata.json
[2026-03-15 18:08:58] -rwx------. 1 boinc boinc     36322 Mar 14 00:38 runpilot2-wrapper.sh
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc       100 Mar 15 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:08:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar 15 16:48 run_atlas
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc       105 Mar 15 16:48 job.xml
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc      6709 Mar 15 16:48 init_data.xml
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc 435833601 Mar 15 16:48 EVNT.46701403._001691.pool.root.1
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:48 start_atlas.sh
[2026-03-15 18:08:58] drwxrwx--x. 2 boinc boinc      4096 Mar 15 16:48 shared
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc    597529 Mar 15 16:48 input.tar.gz
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc         0 Mar 15 16:48 boinc_lockfile
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc      2564 Mar 15 16:48 pandaJob.out
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc   1006473 Mar 15 16:49 agis_schedconf.cvmfs.json
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc   1511579 Mar 15 16:49 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc       444 Mar 15 16:49 workernode_map.json
[2026-03-15 18:08:58] drwx------. 5 boinc boinc      4096 Mar 15 16:49 pilot3
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc 185827106 Mar 15 18:06 HITS.48955010._034833.pool.root.1
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc       530 Mar 15 18:06 boinc_task_state.xml
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc      1028 Mar 15 18:06 memory_monitor_summary.json
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc    305526 Mar 15 18:06 log.48955010._034833.job.log.tgz.1
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc      6355 Mar 15 18:06 heartbeat.json
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc        95 Mar 15 18:07 pilot_heartbeat.json
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc      4831 Mar 15 18:07 pilotlog.txt
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc    684189 Mar 15 18:07 log.48955010._034833.job.log.1
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc       357 Mar 15 18:07 output.list
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc       620 Mar 15 18:07 runtime_log
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc   1003520 Mar 15 18:07 result.tar.gz
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc       662 Mar 15 18:07 vWxNDmGGRL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWArLDmZsrGan.diag
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc      9221 Mar 15 18:07 runtime_log.err
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc        27 Mar 15 18:08 wrapper_checkpoint.txt
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc      8192 Mar 15 18:08 boinc_mmap_file
[2026-03-15 18:08:58] -rw-r--r--. 1 boinc boinc     20833 Mar 15 18:08 stderr.txt
[2026-03-15 18:08:58] HITS file was successfully produced:
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc 185827106 Mar 15 18:06 shared/HITS.pool.root.1
[2026-03-15 18:08:58]  *** Contents of shared directory: ***
[2026-03-15 18:08:58] total 608680
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc 435833601 Mar 15 16:48 ATLAS.root_0
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc     15845 Mar 15 16:48 start_atlas.sh
[2026-03-15 18:08:58] -rw-r--r--. 2 boinc boinc    597529 Mar 15 16:48 input.tar.gz
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc 185827106 Mar 15 18:06 HITS.pool.root.1
[2026-03-15 18:08:58] -rw-------. 1 boinc boinc   1003520 Mar 15 18:07 result.tar.gz
18:08:59 (3083317): run_atlas exited; CPU time 17907.394557
18:08:59 (3083317): called boinc_finish(0)

</stderr_txt>
]]>

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