Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:33:43 (1768553): wrapper (7.7.26015): starting
10:33:43 (1768553): wrapper: running run_atlas (--nthreads 3)
[2026-03-14 10:33:43] Arguments: --nthreads 3
[2026-03-14 10:33:43] Threads: 3
[2026-03-14 10:33:43] Checking for CVMFS
[2026-03-14 10:33:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 10:33:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 10:33:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 10:33:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 10:33:44] 2.9.2.0 2437992 24130 92080 157272 2 50 30803834 36864000 0 130560 0 9961075 99.983 912040 12377 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-14 10:33:44] CVMFS is ok
[2026-03-14 10:33:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 10:33:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 10:33:44] Further information can be found at the LHC@home message board.
[2026-03-14 10:33:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 10:33:44] Checking for apptainer binary...
[2026-03-14 10:33:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 10:33:44] Running /usr/bin/apptainer --version
[2026-03-14 10:33:44] apptainer version 1.4.1-1.1
[2026-03-14 10:33:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 10:33:44] atlasA303a
[2026-03-14 10:33:44] apptainer works
[2026-03-14 10:33:44] Set ATHENA_PROC_NUMBER=3
[2026-03-14 10:33:44] Set ATHENA_CORE_NUMBER=3
[2026-03-14 10:33:44] Starting ATLAS job with PandaID=7044816517
[2026-03-14 10:33:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 11:50:05]  *** The last 200 lines of the pilot log: ***
[2026-03-14 11:50:05] 2026-03-14 10:49:12,116 | INFO     | all job control threads have been joined
[2026-03-14 11:50:05] 2026-03-14 10:49:12,116 | INFO     | all data control threads have been joined
[2026-03-14 11:50:05] 2026-03-14 10:49:12,716 | INFO     | all payload control threads have been joined
[2026-03-14 11:50:05] 2026-03-14 10:49:12,835 | INFO     | [job] retrieve thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:12,836 | INFO     | [job] job monitor thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:12,836 | INFO     | [job] queue monitor thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:12,847 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,122 | INFO     | [job] control thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,122 | INFO     | [data] control thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 11:50:05] 2026-03-14 10:49:13,377 | INFO     | [payload] validate_post thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,518 | INFO     | [job] validate thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,592 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,620 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,721 | INFO     | [payload] control thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,745 | INFO     | [data] copytool_in thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:13,799 | INFO     | [payload] failed_post thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:14,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 11:50:05] 2026-03-14 10:49:15,305 | INFO     | [data] copytool_out thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:18,035 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:22,759 | INFO     | job.realtimelogging is not enabled
[2026-03-14 11:50:05] 2026-03-14 10:49:23,765 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 11:50:05] 2026-03-14 10:49:41,539 | INFO     | PID=1772617 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 11:50:05] 2026-03-14 10:49:41,539 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 11:50:05] 2026-03-14 10:49:41,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 11:50:05] 2026-03-14 10:49:41,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 11:50:05] 2026-03-14 10:49:59,372 | INFO     | [monitor] cgroup control has ended
[2026-03-14 11:50:05] 2026-03-14 10:50:00,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622537647936)>', '<ExcThread(monitor, started 139621669271296)>']
[2026-03-14 11:50:05] 2026-03-14 10:50:00,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 11:50:05] 2026-03-14 10:50:00,638 | INFO     | [monitor] control thread has ended
[2026-03-14 11:50:05] 2026-03-14 10:50:05,274 | INFO     | all workflow threads have been joined
[2026-03-14 11:50:05] 2026-03-14 10:50:05,274 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 11:50:05] 2026-03-14 10:50:05,275 | INFO     | traces error code: 0
[2026-03-14 11:50:05] 2026-03-14 10:50:05,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 11:50:05] 2026-03-14 10:50:05,326 [wrapper] ==== pilot stdout END ====
[2026-03-14 11:50:05] 2026-03-14 10:50:05,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 11:50:05] 2026-03-14 10:50:05,331 [wrapper] pilotpid: 1772617
[2026-03-14 11:50:05] 2026-03-14 10:50:05,333 [wrapper] Pilot exit status: 0
[2026-03-14 11:50:05] 2026-03-14 10:50:05,341 [wrapper] pandaids: 7044816517
[2026-03-14 11:50:05] 2026-03-14 10:50:05,359 [wrapper] cleanup supervisor_pilot 1782387 1772618
[2026-03-14 11:50:05] 2026-03-14 10:50:05,362 [wrapper] Test setup, not cleaning
[2026-03-14 11:50:05] 2026-03-14 10:50:05,364 [wrapper] apfmon messages muted
[2026-03-14 11:50:05] 2026-03-14 10:50:05,367 [wrapper] ==== wrapper stdout END ====
[2026-03-14 11:50:05] 2026-03-14 10:50:05,369 [wrapper] ==== wrapper stderr END ====
[2026-03-14 11:50:05]  *** Error codes and diagnostics ***
[2026-03-14 11:50:05]     "exeErrorCode": 0,
[2026-03-14 11:50:05]     "exeErrorDiag": "",
[2026-03-14 11:50:05]     "pilotErrorCode": 0,
[2026-03-14 11:50:05]     "pilotErrorDiag": "",
[2026-03-14 11:50:05]  *** Listing of results directory ***
[2026-03-14 11:50:05] total 614564
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc    585013 Mar 13 19:06 pilot3.tar.gz
[2026-03-14 11:50:05] -rwx------ 1 boinc boinc     36322 Mar 13 19:07 runpilot2-wrapper.sh
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      5111 Mar 13 19:09 queuedata.json
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc       100 Mar 14 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 11:50:05] -rwxr-xr-x 1 boinc boinc      7986 Mar 14 10:33 run_atlas
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc       105 Mar 14 10:33 job.xml
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc 439283812 Mar 14 10:33 EVNT.46701403._001652.pool.root.1
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc    597535 Mar 14 10:33 input.tar.gz
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:33 start_atlas.sh
[2026-03-14 11:50:05] drwxrwx--x 2 boinc boinc      4096 Mar 14 10:33 shared
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:33 boinc_setup_complete
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      6450 Mar 14 10:33 init_data.xml
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc         0 Mar 14 10:33 boinc_lockfile
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      2564 Mar 14 10:33 pandaJob.out
[2026-03-14 11:50:05] -rw------- 1 boinc boinc   1004579 Mar 14 10:33 agis_schedconf.cvmfs.json
[2026-03-14 11:50:05] -rw------- 1 boinc boinc   1511579 Mar 14 10:33 agis_ddmendpoints.agis.ALL.json
[2026-03-14 11:50:05] -rw------- 1 boinc boinc       427 Mar 14 10:33 workernode_map.json
[2026-03-14 11:50:05] drwx------ 5 boinc boinc      4096 Mar 14 10:33 pilot3
[2026-03-14 11:50:05] -rw------- 1 boinc boinc 184195853 Mar 14 11:48 HITS.48955010._032915.pool.root.1
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc       530 Mar 14 11:48 boinc_task_state.xml
[2026-03-14 11:50:05] -rw------- 1 boinc boinc      1017 Mar 14 11:49 memory_monitor_summary.json
[2026-03-14 11:50:05] -rw------- 1 boinc boinc    287779 Mar 14 11:49 log.48955010._032915.job.log.tgz.1
[2026-03-14 11:50:05] -rw------- 1 boinc boinc      6314 Mar 14 11:49 heartbeat.json
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc        27 Mar 14 11:49 wrapper_checkpoint.txt
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      8192 Mar 14 11:49 boinc_mmap_file
[2026-03-14 11:50:05] -rw------- 1 boinc boinc        95 Mar 14 11:49 pilot_heartbeat.json
[2026-03-14 11:50:05] -rw------- 1 boinc boinc      4820 Mar 14 11:50 pilotlog.txt
[2026-03-14 11:50:05] -rw------- 1 boinc boinc    667240 Mar 14 11:50 log.48955010._032915.job.log.1
[2026-03-14 11:50:05] -rw------- 1 boinc boinc       357 Mar 14 11:50 output.list
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc       620 Mar 14 11:50 runtime_log
[2026-03-14 11:50:05] -rw------- 1 boinc boinc    972800 Mar 14 11:50 result.tar.gz
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      8916 Mar 14 11:50 runtime_log.err
[2026-03-14 11:50:05] -rw------- 1 boinc boinc       661 Mar 14 11:50 XdBODmH6LL9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmiRqLDmublxHn.diag
[2026-03-14 11:50:05] -rw-r--r-- 1 boinc boinc      6966 Mar 14 11:50 stderr.txt
[2026-03-14 11:50:05] HITS file was successfully produced:
[2026-03-14 11:50:05] -rw------- 1 boinc boinc 184195853 Mar 14 11:48 shared/HITS.pool.root.1
[2026-03-14 11:50:05]  *** Contents of shared directory: ***
[2026-03-14 11:50:05] total 610432
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc 439283812 Mar 14 10:33 ATLAS.root_0
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc    597535 Mar 14 10:33 input.tar.gz
[2026-03-14 11:50:05] -rw-r--r-- 2 boinc boinc     15845 Mar 14 10:33 start_atlas.sh
[2026-03-14 11:50:05] -rw------- 1 boinc boinc 184195853 Mar 14 11:48 HITS.pool.root.1
[2026-03-14 11:50:05] -rw------- 1 boinc boinc    972800 Mar 14 11:50 result.tar.gz
11:50:06 (1768553): run_atlas exited; CPU time 12605.506891
11:50:06 (1768553): called boinc_finish(0)

</stderr_txt>
]]>

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