Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:38:54 (19710): wrapper (7.7.26015): starting
03:38:54 (19710): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 03:38:54] Arguments: --nthreads 8
[2026-03-14 03:38:54] Threads: 8
[2026-03-14 03:38:54] Checking for CVMFS
[2026-03-14 03:38:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 03:38:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 03:38:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 03:38:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 03:38:54] 2.11.0.0 4292 143619 90148 157261 3 1 2260998 4096000 0 130560 2 7105763 99.519 7542552 330 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-14 03:38:54] CVMFS is ok
[2026-03-14 03:38:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-14 03:38:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-14 03:38:54] Further information can be found at the LHC@home message board.
[2026-03-14 03:38:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 03:38:54] Checking for apptainer binary...
[2026-03-14 03:38:54] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-14 03:38:54] apptainer is not installed, using version from CVMFS
[2026-03-14 03:38:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 03:38:55] WARNING: Environment variable TMPDIR already has value [/tmp/job_11306782/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node168
[2026-03-14 03:38:55] apptainer works
[2026-03-14 03:38:55] Set ATHENA_PROC_NUMBER=8
[2026-03-14 03:38:55] Set ATHENA_CORE_NUMBER=8
[2026-03-14 03:38:55] Starting ATLAS job with PandaID=7047545344
[2026-03-14 03:38:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11306782/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 04:48:15]  *** The last 200 lines of the pilot log: ***
[2026-03-14 04:48:15]  scope=mc23_13p6TeV
[2026-03-14 04:48:15]  status=None
[2026-03-14 04:48:15]  status_code=0
[2026-03-14 04:48:15]  storage_token=
[2026-03-14 04:48:15]  surl=/tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/log.48998032._000944.job.log.tgz.1
[2026-03-14 04:48:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/38/log.48998032._000944.job.log.tgz.1
[2026-03-14 04:48:15]  workdir=None
[2026-03-14 04:48:15] ]
[2026-03-14 04:48:15] 2026-03-14 03:47:35,493 | INFO     | transferring file log.48998032._000944.job.log.tgz.1 from /tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/log.48998032._000944.job.log.tgz.1 to /tmp/j
[2026-03-14 04:48:15] 2026-03-14 03:47:35,493 | INFO     | executing command: /usr/bin/env mv /tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/log.48998032._000944.job.log.tgz.1 /tmp/job_11306782/atlas/pilot/sl
[2026-03-14 04:48:15] 2026-03-14 03:47:35,499 | INFO     | adding to output.list: log.48998032._000944.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/38/log.48998032._000944.job.log.tg
[2026-03-14 04:48:15] 2026-03-14 03:47:35,500 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-14 04:48:15] 2026-03-14 03:47:35,500 | INFO     | summary of transferred files:
[2026-03-14 04:48:15] 2026-03-14 03:47:35,500 | INFO     |  -- lfn=log.48998032._000944.job.log.tgz.1, status_code=0, status=transferred
[2026-03-14 04:48:15] 2026-03-14 03:47:35,500 | INFO     | stage-out finished correctly
[2026-03-14 04:48:15] 2026-03-14 03:47:35,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-14 04:48:15] 2026-03-14 03:47:37,469 | INFO     | time since job start (4116s) is within the limit (349056.0s)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,048 | INFO     | job 7047545344 has state=finished
[2026-03-14 04:48:15] 2026-03-14 03:47:38,048 | INFO     | preparing for final server update for job 7047545344 in state='finished'
[2026-03-14 04:48:15] 2026-03-14 03:47:38,048 | INFO     | reading metadata from: /tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/jobReport.json
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | added worker_node to metadata from /tmp/job_11306782/atlas/pilot/slots/0/workernode_map.json
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | this job has now completed (state=finished)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | log transfer has been attempted: DONE
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | job 7047545344 has finished - writing final server update
[2026-03-14 04:48:15] 2026-03-14 03:47:38,050 | INFO     | total number of processed events: 400 (read)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,068 | INFO     | using path: /tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,069 | INFO     | extracted standard info from prmon json
[2026-03-14 04:48:15] 2026-03-14 03:47:38,069 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 04:48:15] 2026-03-14 03:47:38,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 04:48:15] 2026-03-14 03:47:38,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 04:48:15] 2026-03-14 03:47:38,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | fitting pss+swap vs Time
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | sum of square deviations: 70364110.0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | sum of deviations: -11681182311.999998
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | mean x: 1773458093.0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | mean y: 2743555.2131147543
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | intersect: 294415439275.0176
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | chi2: 0.10579735583102548
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | current memory leak: -166.01 B/s (using 61 data points, chi2=0.11)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | could have reported an average CPU frequency of 2365 MHz (6 samples)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,070 | INFO     | ..............................
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . Timing measurements:
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . get job = 0 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . initial setup = 2 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . payload setup = 2 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . stage-in = 0 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . payload execution = 4095 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . stage-out = 0 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | . log creation = 0 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,071 | INFO     | ..............................
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | 
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | job summary report
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | --------------------------------------------------
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | PanDA job id: 7047545344
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | task id: 48998032
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | errors: (none)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | pilot state: finished 
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | transexitcode: 0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | exeerrorcode: 0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | exeerrordiag: 
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | exitcode: 0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | exitmsg: OK
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | cpuconsumptiontime: 30345 s
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | nevents: 400
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | neventsw: 0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | pid: 28019
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | pgrp: 28019
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | corecount: 8
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | event service: False
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | sizes: {0: 2280355, 11: 2280355, 4102: 2306418, 4103: 2315502, 4105: 2315640}
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | --------------------------------------------------
[2026-03-14 04:48:15] 2026-03-14 03:47:38,119 | INFO     | 
[2026-03-14 04:48:15] 2026-03-14 03:47:38,120 | INFO     | executing command: ls -lF /tmp/job_11306782/atlas/pilot/slots/0
[2026-03-14 04:48:15] 2026-03-14 03:47:38,127 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | job 7047545344 has completed (purged errors)
[2026-03-14 04:48:15] 2026-03-14 03:47:38,128 | INFO     | overall cleanup function is called
[2026-03-14 04:48:15] 2026-03-14 03:47:39,134 | INFO     | --- collectZombieJob: --- 10, [28019]
[2026-03-14 04:48:15] 2026-03-14 03:47:39,134 | INFO     | zombie collector waiting for pid 28019
[2026-03-14 04:48:15] 2026-03-14 03:47:39,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 04:48:15] 2026-03-14 03:47:39,134 | INFO     | collected zombie processes
[2026-03-14 04:48:15] 2026-03-14 03:47:39,134 | INFO     | will attempt to kill all subprocesses of pid=28019
[2026-03-14 04:48:15] 2026-03-14 03:47:39,253 | INFO     | process IDs to be killed: [28019] (in reverse order)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,294 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 04:48:15] 2026-03-14 03:47:39,298 | INFO     | did not find any defunct processes belonging to 28019
[2026-03-14 04:48:15] 2026-03-14 03:47:39,301 | INFO     | did not find any defunct processes belonging to 28019
[2026-03-14 04:48:15] 2026-03-14 03:47:39,301 | INFO     | ready for new job
[2026-03-14 04:48:15] 2026-03-14 03:47:39,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 04:48:15] 2026-03-14 03:47:39,302 | INFO     | **************************************
[2026-03-14 04:48:15] 2026-03-14 03:47:39,302 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-14 04:48:15] 2026-03-14 03:47:39,302 | INFO     | **************************************
[2026-03-14 04:48:15] 2026-03-14 03:47:39,302 | INFO     | 
[2026-03-14 04:48:15] 2026-03-14 03:47:39,317 | INFO     | architecture information:
[2026-03-14 04:48:15] 2026-03-14 03:47:39,317 | INFO     | executing command: cat /etc/os-release
[2026-03-14 04:48:15] 2026-03-14 03:47:39,322 | INFO     | cat /etc/os-release:
[2026-03-14 04:48:15] NAME="CentOS Linux"
[2026-03-14 04:48:15] VERSION="7 (Core)"
[2026-03-14 04:48:15] ID="centos"
[2026-03-14 04:48:15] ID_LIKE="rhel fedora"
[2026-03-14 04:48:15] VERSION_ID="7"
[2026-03-14 04:48:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 04:48:15] ANSI_COLOR="0;31"
[2026-03-14 04:48:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 04:48:15] HOME_URL="https://www.centos.org/"
[2026-03-14 04:48:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 04:48:15] 
[2026-03-14 04:48:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 04:48:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 04:48:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 04:48:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 04:48:15] 
[2026-03-14 04:48:15] 2026-03-14 03:47:39,322 | INFO     | **************************************
[2026-03-14 04:48:15] 2026-03-14 03:47:39,485 | WARNING  | process 28019 can no longer be monitored (due to stat problems) - aborting
[2026-03-14 04:48:15] 2026-03-14 03:47:39,574 | INFO     | using path: /tmp/job_11306782/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,575 | INFO     | using path: /tmp/job_11306782/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,575 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-14 04:48:15] 2026-03-14 03:47:39,575 | WARNING  | maxPSS not found in memory monitor output
[2026-03-14 04:48:15] 2026-03-14 03:47:39,575 | INFO     | skipping file size check of payload stdout file (/tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/payload.stdout) since it has not been created yet
[2026-03-14 04:48:15] 2026-03-14 03:47:39,575 | INFO     | executing command: df -mP /tmp/job_11306782/atlas/pilot/slots/0
[2026-03-14 04:48:15] 2026-03-14 03:47:39,581 | INFO     | sufficient remaining disk space (221123706880 B)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,581 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-14 04:48:15] 2026-03-14 03:47:39,581 | INFO     | output file size check: skipping output file /tmp/job_11306782/atlas/pilot/slots/0/PanDA_Pilot-7047545344/HITS.48998032._000944.pool.root.1 since it does not exist
[2026-03-14 04:48:15] 2026-03-14 03:47:39,697 | INFO     | number of running child processes to parent process 28019: 1
[2026-03-14 04:48:15] 2026-03-14 03:47:39,697 | INFO     | maximum number of monitored processes: 6
[2026-03-14 04:48:15] 2026-03-14 03:47:39,697 | INFO     | aborting job monitoring since job object (job id=7047545344) has expired
[2026-03-14 04:48:15] 2026-03-14 03:47:39,825 | INFO     | executing command: df -mP /tmp/job_11306782/atlas/pilot/slots/0
[2026-03-14 04:48:15] 2026-03-14 03:47:39,830 | INFO     | sufficient remaining disk space (221123706880 B)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 04:48:15] 2026-03-14 03:47:39,830 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 04:48:15] 2026-03-14 03:47:39,830 | INFO     | update_server=False
[2026-03-14 04:48:15] 2026-03-14 03:47:39,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 04:48:15] 2026-03-14 03:47:39,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:48:15] 2026-03-14 03:47:39,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 04:48:15] 2026-03-14 03:47:39,831 | INFO     | will abort loop
[2026-03-14 04:48:15] 2026-03-14 03:47:39,897 | INFO     | all payload control threads have been joined
[2026-03-14 04:48:15] 2026-03-14 03:47:40,210 | INFO     | all job control threads have been joined
[2026-03-14 04:48:15] 2026-03-14 03:47:40,836 | INFO     | [job] retrieve thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:40,836 | INFO     | [job] queue monitor thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:40,836 | INFO     | [job] job monitor thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:40,894 | INFO     | [payload] validate_post thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:40,902 | INFO     | [payload] control thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:40,917 | INFO     | all data control threads have been joined
[2026-03-14 04:48:15] 2026-03-14 03:47:41,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 04:48:15] 2026-03-14 03:47:41,215 | INFO     | [job] control thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:41,468 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:41,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 04:48:15] 2026-03-14 03:47:41,783 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:41,829 | INFO     | [job] validate thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:41,922 | INFO     | [data] control thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:41,975 | INFO     | [data] copytool_in thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:42,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:42,075 | INFO     | [payload] failed_post thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:43,065 | INFO     | [data] copytool_out thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:45,614 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:47:49,977 | INFO     | job.realtimelogging is not enabled
[2026-03-14 04:48:15] 2026-03-14 03:47:50,983 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 04:48:15] 2026-03-14 03:48:08,183 | INFO     | [monitor] cgroup control has ended
[2026-03-14 04:48:15] 2026-03-14 03:48:10,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-14 04:48:15] 2026-03-14 03:48:10,678 | INFO     | PID=23488 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 04:48:15] 2026-03-14 03:48:10,678 | INFO     | .. there are 8 such processes running
[2026-03-14 04:48:15] 2026-03-14 03:48:10,678 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 04:48:15] 2026-03-14 03:48:10,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 04:48:15] 2026-03-14 03:48:10,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 04:48:15] 2026-03-14 03:48:10,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 04:48:15] 2026-03-14 03:48:10,679 | INFO     | [monitor] control thread has ended
[2026-03-14 04:48:15] 2026-03-14 03:48:15,037 | INFO     | all workflow threads have been joined
[2026-03-14 04:48:15] 2026-03-14 03:48:15,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 04:48:15] 2026-03-14 03:48:15,037 | INFO     | traces error code: 0
[2026-03-14 04:48:15] 2026-03-14 03:48:15,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 04:48:15] 2026-03-14 03:48:15,088 [wrapper] ==== pilot stdout END ====
[2026-03-14 04:48:15] 2026-03-14 03:48:15,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 04:48:15] 2026-03-14 03:48:15,090 [wrapper] pilotpid: 23488
[2026-03-14 04:48:15] 2026-03-14 03:48:15,091 [wrapper] Pilot exit status: 0
[2026-03-14 04:48:15] 2026-03-14 03:48:15,094 [wrapper] pandaids: 7047545344
[2026-03-14 04:48:15] 2026-03-14 03:48:15,119 [wrapper] cleanup supervisor_pilot  7658 23489
[2026-03-14 04:48:15] 2026-03-14 03:48:15,120 [wrapper] Test setup, not cleaning
[2026-03-14 04:48:15] 2026-03-14 03:48:15,121 [wrapper] apfmon messages muted
[2026-03-14 04:48:15] 2026-03-14 03:48:15,122 [wrapper] ==== wrapper stdout END ====
[2026-03-14 04:48:15] 2026-03-14 03:48:15,123 [wrapper] ==== wrapper stderr END ====
[2026-03-14 04:48:15]  *** Error codes and diagnostics ***
[2026-03-14 04:48:15]     "exeErrorCode": 0,
[2026-03-14 04:48:15]     "exeErrorDiag": "",
[2026-03-14 04:48:15]     "pilotErrorCode": 0,
[2026-03-14 04:48:15]     "pilotErrorDiag": "",
[2026-03-14 04:48:15]  *** Listing of results directory ***
[2026-03-14 04:48:15] total 639800
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      5111 Mar  9 18:06 queuedata.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user    584627 Mar  9 18:06 pilot3.tar.gz
[2026-03-14 04:48:15] -rwx------ 1 mf493845 unix-user     36322 Mar  9 18:06 runpilot2-wrapper.sh
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       100 Mar 14 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 04:48:15] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 14 02:06 run_atlas
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       105 Mar 14 02:06 job.xml
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 03:38 start_atlas.sh
[2026-03-14 04:48:15] drwxrwx--x 2 mf493845 unix-user       100 Mar 14 03:38 shared
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user    597940 Mar 14 03:38 input.tar.gz
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      6391 Mar 14 03:38 init_data.xml
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user 361658498 Mar 14 03:38 EVNT.48998030._000038.pool.root.1
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user         0 Mar 14 03:38 boinc_setup_complete
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      8192 Mar 14 03:38 boinc_mmap_file
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user         0 Mar 14 03:38 boinc_lockfile
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      2559 Mar 14 03:38 pandaJob.out
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user   1006013 Mar 14 03:38 agis_schedconf.cvmfs.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user   1511579 Mar 14 03:38 agis_ddmendpoints.agis.ALL.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       416 Mar 14 03:39 workernode_map.json
[2026-03-14 04:48:15] drwx------ 5 mf493845 unix-user       440 Mar 14 03:39 pilot3
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user 287695627 Mar 14 04:47 HITS.48998032._000944.pool.root.1
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      1014 Mar 14 04:47 memory_monitor_summary.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user    323407 Mar 14 04:47 log.48998032._000944.job.log.tgz.1
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      6310 Mar 14 04:47 heartbeat.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user        95 Mar 14 04:48 pilot_heartbeat.json
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      6460 Mar 14 04:48 pilotlog.txt
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user    623675 Mar 14 04:48 log.48998032._000944.job.log.1
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       357 Mar 14 04:48 output.list
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       620 Mar 14 04:48 runtime_log
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user    962560 Mar 14 04:48 result.tar.gz
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user      9219 Mar 14 04:48 runtime_log.err
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user       644 Mar 14 04:48 1PKKDmJFtJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzXaLDm6HtDWn.diag
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user     22648 Mar 14 04:48 stderr.txt
[2026-03-14 04:48:15] HITS file was successfully produced:
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user 287695627 Mar 14 04:47 shared/HITS.pool.root.1
[2026-03-14 04:48:15]  *** Contents of shared directory: ***
[2026-03-14 04:48:15] total 635680
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 14 03:38 start_atlas.sh
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user    597940 Mar 14 03:38 input.tar.gz
[2026-03-14 04:48:15] -rw-r--r-- 2 mf493845 unix-user 361658498 Mar 14 03:38 ATLAS.root_0
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user 287695627 Mar 14 04:47 HITS.pool.root.1
[2026-03-14 04:48:15] -rw------- 1 mf493845 unix-user    962560 Mar 14 04:48 result.tar.gz
04:48:16 (19710): run_atlas exited; CPU time 30406.104168
04:48:16 (19710): called boinc_finish(0)

</stderr_txt>
]]>

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