Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:19:39 (7024): wrapper (7.7.26015): starting
09:19:39 (7024): wrapper: running run_atlas (--nthreads 8)
[2026-03-14 09:19:39] Arguments: --nthreads 8
[2026-03-14 09:19:39] Threads: 8
[2026-03-14 09:19:39] Checking for CVMFS
[2026-03-14 09:19:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-14 09:19:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-14 09:19:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-14 09:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-14 09:19:43] 2.11.2.0 9196 127327 135472 157271 0 53 22032477 25165825 4727 130560 159 43784216 99.812 34131888 1025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-14 09:19:43] CVMFS is ok
[2026-03-14 09:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-14 09:19:43] Checking for apptainer binary...
[2026-03-14 09:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-14 09:19:43] Running /usr/bin/apptainer --version
[2026-03-14 09:19:43] apptainer version 1.3.2-1.el7
[2026-03-14 09:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-14 09:19:51] cg-vwn422.simple-grid.lan
[2026-03-14 09:19:51] apptainer works
[2026-03-14 09:19:52] Set ATHENA_PROC_NUMBER=8
[2026-03-14 09:19:52] Set ATHENA_CORE_NUMBER=8
[2026-03-14 09:19:52] Starting ATLAS job with PandaID=7044871252
[2026-03-14 09:19:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 13:20:11]  *** The last 200 lines of the pilot log: ***
[2026-03-14 13:20:11] 2026-03-14 12:18:58,314 | INFO     | job 7044871252 has finished - writing final server update
[2026-03-14 13:20:11] 2026-03-14 12:18:58,315 | INFO     | total number of processed events: 400 (read)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,317 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7044871252/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,318 | INFO     | extracted standard info from prmon json
[2026-03-14 13:20:11] 2026-03-14 12:18:58,318 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 13:20:11] 2026-03-14 12:18:58,318 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 13:20:11] 2026-03-14 12:18:58,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 13:20:11] 2026-03-14 12:18:58,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 13:20:11] 2026-03-14 12:18:58,324 | INFO     | fitting pss+swap vs Time
[2026-03-14 13:20:11] 2026-03-14 12:18:58,324 | INFO     | sum of square deviations: 3579276412.5
[2026-03-14 13:20:11] 2026-03-14 12:18:58,326 | INFO     | sum of deviations: 42769621526.49999
[2026-03-14 13:20:11] 2026-03-14 12:18:58,326 | INFO     | mean x: 1773483858.5
[2026-03-14 13:20:11] 2026-03-14 12:18:58,327 | INFO     | mean y: 2455694.8451327435
[2026-03-14 13:20:11] 2026-03-14 12:18:58,327 | INFO     | intersect: -21189322941.335255
[2026-03-14 13:20:11] 2026-03-14 12:18:58,327 | INFO     | chi2: 6.401674131683549
[2026-03-14 13:20:11] 2026-03-14 12:18:58,328 | INFO     | sum of square deviations: 3346927870.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,330 | INFO     | sum of deviations: 56676426749.999985
[2026-03-14 13:20:11] 2026-03-14 12:18:58,330 | INFO     | mean x: 1773483706.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,330 | INFO     | mean y: 2464647.7647058824
[2026-03-14 13:20:11] 2026-03-14 12:18:58,330 | INFO     | intersect: -30029470087.48476
[2026-03-14 13:20:11] 2026-03-14 12:18:58,330 | INFO     | chi2: 5.6900209468665786
[2026-03-14 13:20:11] 2026-03-14 12:18:58,334 | INFO     | current chi2=5.6900209468665786 (change=11.116673079231168 %)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,334 | INFO     | right removable region: 220
[2026-03-14 13:20:11] 2026-03-14 12:18:58,334 | INFO     | sum of square deviations: 3346927870.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,336 | INFO     | sum of deviations: -33611535153.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,337 | INFO     | mean x: 1773484011.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,337 | INFO     | mean y: 2505777.0859728507
[2026-03-14 13:20:11] 2026-03-14 12:18:58,337 | INFO     | intersect: 17812725325.97931
[2026-03-14 13:20:11] 2026-03-14 12:18:58,337 | INFO     | chi2: 1.8560388450854348
[2026-03-14 13:20:11] 2026-03-14 12:18:58,337 | INFO     | current chi2=1.8560388450854348 (change=71.00697712963215 %)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,338 | INFO     | sum of square deviations: 3124858590.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,340 | INFO     | sum of deviations: -60868771401.49999
[2026-03-14 13:20:11] 2026-03-14 12:18:58,340 | INFO     | mean x: 1773484163.5
[2026-03-14 13:20:11] 2026-03-14 12:18:58,340 | INFO     | mean y: 2524332.7731481483
[2026-03-14 13:20:11] 2026-03-14 12:18:58,340 | INFO     | intersect: 34548024240.42239
[2026-03-14 13:20:11] 2026-03-14 12:18:58,341 | INFO     | chi2: 0.9937439838944269
[2026-03-14 13:20:11] 2026-03-14 12:18:58,341 | INFO     | current chi2=0.9937439838944269 (change=46.458880075396046 %)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,341 | INFO     | sum of square deviations: 2912836010.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,343 | INFO     | sum of deviations: -58723273392.999985
[2026-03-14 13:20:11] 2026-03-14 12:18:58,343 | INFO     | mean x: 1773484316.0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,343 | INFO     | mean y: 2522750.848341232
[2026-03-14 13:20:11] 2026-03-14 12:18:58,344 | INFO     | intersect: 35756270640.92115
[2026-03-14 13:20:11] 2026-03-14 12:18:58,344 | INFO     | chi2: 0.9786877596370861
[2026-03-14 13:20:11] 2026-03-14 12:18:58,344 | INFO     | current chi2=0.9786877596370861 (change=1.5151009215005529 %)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,344 | INFO     | left removable region: 30
[2026-03-14 13:20:11] 2026-03-14 12:18:58,345 | INFO     | sum of square deviations: 2126802667.5
[2026-03-14 13:20:11] 2026-03-14 12:18:58,346 | INFO     | sum of deviations: -22867386894.999996
[2026-03-14 13:20:11] 2026-03-14 12:18:58,346 | INFO     | mean x: 1773484590.5
[2026-03-14 13:20:11] 2026-03-14 12:18:58,347 | INFO     | mean y: 2516868.094736842
[2026-03-14 13:20:11] 2026-03-14 12:18:58,347 | INFO     | intersect: 19071027032.67687
[2026-03-14 13:20:11] 2026-03-14 12:18:58,347 | INFO     | chi2: 0.1406298282835775
[2026-03-14 13:20:11] 2026-03-14 12:18:58,347 | INFO     | current memory leak: -10.75 B/s (using 190 data points, chi2=0.14)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,348 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,348 | INFO     | ..............................
[2026-03-14 13:20:11] 2026-03-14 12:18:58,348 | INFO     | . Timing measurements:
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . get job = 0 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . initial setup = 113 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . payload setup = 138 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . stage-in = 0 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . payload execution = 13848 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . stage-out = 4 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | . log creation = 1 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,349 | INFO     | ..............................
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | 
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | job summary report
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | --------------------------------------------------
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | PanDA job id: 7044871252
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | task id: 48955015
[2026-03-14 13:20:11] 2026-03-14 12:18:58,480 | INFO     | errors: (none)
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | pilot state: finished 
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | transexitcode: 0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | exeerrorcode: 0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | exeerrordiag: 
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | exitcode: 0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | exitmsg: OK
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | cpuconsumptiontime: 51300 s
[2026-03-14 13:20:11] 2026-03-14 12:18:58,481 | INFO     | nevents: 400
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | neventsw: 0
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | pid: 15636
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | pgrp: 15636
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | corecount: 8
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | event service: False
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | sizes: {0: 2279148, 1: 2280266, 2: 2280294, 13991: 2310687, 13996: 2319685, 13998: 2319741, 13999: 2320063}
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | --------------------------------------------------
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | 
[2026-03-14 13:20:11] 2026-03-14 12:18:58,482 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-14 13:20:11] 2026-03-14 12:18:58,720 | INFO     | time since job start (14001s) is within the limit (345600.0s)
[2026-03-14 13:20:11] 2026-03-14 12:18:59,031 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,033 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 13:20:11] 2026-03-14 12:18:59,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 13:20:11] 2026-03-14 12:18:59,034 | INFO     | job 7044871252 has completed (purged errors)
[2026-03-14 13:20:11] 2026-03-14 12:18:59,034 | INFO     | overall cleanup function is called
[2026-03-14 13:20:11] 2026-03-14 12:19:00,043 | INFO     | --- collectZombieJob: --- 10, [15636]
[2026-03-14 13:20:11] 2026-03-14 12:19:00,043 | INFO     | zombie collector waiting for pid 15636
[2026-03-14 13:20:11] 2026-03-14 12:19:00,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 13:20:11] 2026-03-14 12:19:00,043 | INFO     | collected zombie processes
[2026-03-14 13:20:11] 2026-03-14 12:19:00,043 | INFO     | will attempt to kill all subprocesses of pid=15636
[2026-03-14 13:20:11] 2026-03-14 12:19:00,173 | INFO     | process IDs to be killed: [15636] (in reverse order)
[2026-03-14 13:20:11] 2026-03-14 12:19:01,185 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 13:20:11] 2026-03-14 12:19:01,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 13:20:11] 2026-03-14 12:19:01,189 | INFO     | did not find any defunct processes belonging to 15636
[2026-03-14 13:20:11] 2026-03-14 12:19:01,192 | INFO     | did not find any defunct processes belonging to 15636
[2026-03-14 13:20:11] 2026-03-14 12:19:01,192 | INFO     | ready for new job
[2026-03-14 13:20:11] 2026-03-14 12:19:01,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 13:20:11] 2026-03-14 12:19:01,194 | INFO     | **************************************
[2026-03-14 13:20:11] 2026-03-14 12:19:01,194 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 13:20:11] 2026-03-14 12:19:01,194 | INFO     | **************************************
[2026-03-14 13:20:11] 2026-03-14 12:19:01,195 | INFO     | 
[2026-03-14 13:20:11] 2026-03-14 12:19:01,195 | INFO     | pilot is running in a VM
[2026-03-14 13:20:11] 2026-03-14 12:19:01,195 | INFO     | architecture information:
[2026-03-14 13:20:11] 2026-03-14 12:19:01,202 | INFO     | executing command: cat /etc/os-release
[2026-03-14 13:20:11] 2026-03-14 12:19:01,517 | INFO     | cat /etc/os-release:
[2026-03-14 13:20:11] NAME="CentOS Linux"
[2026-03-14 13:20:11] VERSION="7 (Core)"
[2026-03-14 13:20:11] ID="centos"
[2026-03-14 13:20:11] ID_LIKE="rhel fedora"
[2026-03-14 13:20:11] VERSION_ID="7"
[2026-03-14 13:20:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 13:20:11] ANSI_COLOR="0;31"
[2026-03-14 13:20:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 13:20:11] HOME_URL="https://www.centos.org/"
[2026-03-14 13:20:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 13:20:11] 
[2026-03-14 13:20:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 13:20:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 13:20:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 13:20:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 13:20:11] 
[2026-03-14 13:20:11] 2026-03-14 12:19:01,521 | INFO     | **************************************
[2026-03-14 13:20:11] 2026-03-14 12:19:02,024 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-14 13:20:11] 2026-03-14 12:19:02,313 | INFO     | sufficient remaining disk space (496519610368 B)
[2026-03-14 13:20:11] 2026-03-14 12:19:02,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 13:20:11] 2026-03-14 12:19:02,313 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 13:20:11] 2026-03-14 12:19:02,313 | INFO     | update_server=False
[2026-03-14 13:20:11] 2026-03-14 12:19:02,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 13:20:11] 2026-03-14 12:19:02,535 | INFO     | all data control threads have been joined
[2026-03-14 13:20:11] 2026-03-14 12:19:02,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:20:11] 2026-03-14 12:19:02,885 | INFO     | aborting loop
[2026-03-14 13:20:11] 2026-03-14 12:19:02,938 | INFO     | all job control threads have been joined
[2026-03-14 13:20:11] 2026-03-14 12:19:03,320 | INFO     | [job] retrieve thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,337 | INFO     | [payload] failed_post thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 13:20:11] 2026-03-14 12:19:03,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 13:20:11] 2026-03-14 12:19:03,541 | INFO     | [data] control thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,558 | INFO     | [data] copytool_in thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,562 | INFO     | [job] validate thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,638 | INFO     | all payload control threads have been joined
[2026-03-14 13:20:11] 2026-03-14 12:19:03,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 13:20:11] 2026-03-14 12:19:03,891 | INFO     | [job] job monitor thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,920 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:03,944 | INFO     | [job] control thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,048 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,406 | INFO     | [payload] validate_post thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,501 | INFO     | [job] queue monitor thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,644 | INFO     | [payload] control thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,662 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:04,780 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:05,492 | INFO     | [data] copytool_out thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:07,757 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 13:20:11] 2026-03-14 12:19:31,912 | INFO     | PID=11129 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-14 13:20:11] 2026-03-14 12:19:31,912 | INFO     | .. there are 9 such processes running
[2026-03-14 13:20:11] 2026-03-14 12:19:31,913 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 13:20:11] 2026-03-14 12:19:31,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 13:20:11] 2026-03-14 12:19:31,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 13:20:11] 2026-03-14 12:20:01,355 | INFO     | [monitor] cgroup control has ended
[2026-03-14 13:20:11] 2026-03-14 12:20:02,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086740100928)>', '<ExcThread(monitor, started 140086305867520)>']
[2026-03-14 13:20:11] 2026-03-14 12:20:02,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 13:20:11] 2026-03-14 12:20:02,090 | INFO     | [monitor] control thread has ended
[2026-03-14 13:20:11] 2026-03-14 12:20:07,061 | INFO     | all workflow threads have been joined
[2026-03-14 13:20:11] 2026-03-14 12:20:07,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 13:20:11] 2026-03-14 12:20:07,061 | INFO     | traces error code: 0
[2026-03-14 13:20:11] 2026-03-14 12:20:07,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 13:20:11] 2026-03-14 12:20:07,441 [wrapper] ==== pilot stdout END ====
[2026-03-14 13:20:11] 2026-03-14 12:20:07,570 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 13:20:11] 2026-03-14 12:20:07,661 [wrapper] pilotpid: 11129
[2026-03-14 13:20:11] 2026-03-14 12:20:07,713 [wrapper] Pilot exit status: 0
[2026-03-14 13:20:11] 2026-03-14 12:20:08,072 [wrapper] pandaids: 7044871252
[2026-03-14 13:20:11] 2026-03-14 12:20:08,966 [wrapper] cleanup supervisor_pilot 26398 11130
[2026-03-14 13:20:11] 2026-03-14 12:20:09,076 [wrapper] Test setup, not cleaning
[2026-03-14 13:20:11] 2026-03-14 12:20:09,132 [wrapper] apfmon messages muted
[2026-03-14 13:20:11] 2026-03-14 12:20:09,210 [wrapper] ==== wrapper stdout END ====
[2026-03-14 13:20:11] 2026-03-14 12:20:09,257 [wrapper] ==== wrapper stderr END ====
[2026-03-14 13:20:11]  *** Error codes and diagnostics ***
[2026-03-14 13:20:11]     "exeErrorCode": 0,
[2026-03-14 13:20:11]     "exeErrorDiag": "",
[2026-03-14 13:20:11]     "pilotErrorCode": 0,
[2026-03-14 13:20:11]     "pilotErrorDiag": "",
[2026-03-14 13:20:11]  *** Listing of results directory ***
[2026-03-14 13:20:11] total 618232
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc    585013 Mar 13 19:59 pilot3.tar.gz
[2026-03-14 13:20:11] -rwx------. 1 boinc boinc     36322 Mar 13 20:00 runpilot2-wrapper.sh
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc      5111 Mar 13 20:00 queuedata.json
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc       100 Mar 14 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 13:20:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 14 09:19 run_atlas
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc       105 Mar 14 09:19 job.xml
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc 441912776 Mar 14 09:19 EVNT.46701403._002437.pool.root.1
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:19 start_atlas.sh
[2026-03-14 13:20:11] drwxrwx--x. 2 boinc boinc        68 Mar 14 09:19 shared
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc    597531 Mar 14 09:19 input.tar.gz
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc      6390 Mar 14 09:19 init_data.xml
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc         0 Mar 14 09:19 boinc_lockfile
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc      2572 Mar 14 09:19 pandaJob.out
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc       415 Mar 14 09:25 workernode_map.json
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc   1004579 Mar 14 09:25 agis_schedconf.cvmfs.json
[2026-03-14 13:20:11] drwx------. 5 boinc boinc      4096 Mar 14 09:25 pilot3
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc 182377111 Mar 14 13:17 HITS.48955015._019089.pool.root.1
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc       531 Mar 14 13:18 boinc_task_state.xml
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc      1016 Mar 14 13:18 memory_monitor_summary.json
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc   1511579 Mar 14 13:18 agis_ddmendpoints.agis.ALL.json
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc    478553 Mar 14 13:18 log.48955015._019089.job.log.tgz.1
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc      6323 Mar 14 13:18 heartbeat.json
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc        95 Mar 14 13:19 pilot_heartbeat.json
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc      8192 Mar 14 13:20 boinc_mmap_file
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc        28 Mar 14 13:20 wrapper_checkpoint.txt
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc      4880 Mar 14 13:20 pilotlog.txt
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc   1953033 Mar 14 13:20 log.48955015._019089.job.log.1
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc       357 Mar 14 13:20 output.list
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc       620 Mar 14 13:20 runtime_log
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc   2447360 Mar 14 13:20 result.tar.gz
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc      8816 Mar 14 13:20 runtime_log.err
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc       655 Mar 14 13:20 EwZKDmevML9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQtnLDmGP1BLo.diag
[2026-03-14 13:20:11] -rw-r--r--. 1 boinc boinc     20728 Mar 14 13:20 stderr.txt
[2026-03-14 13:20:11] HITS file was successfully produced:
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc 182377111 Mar 14 13:17 shared/HITS.pool.root.1
[2026-03-14 13:20:11]  *** Contents of shared directory: ***
[2026-03-14 13:20:11] total 612652
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc 441912776 Mar 14 09:19 ATLAS.root_0
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc     15845 Mar 14 09:19 start_atlas.sh
[2026-03-14 13:20:11] -rw-r--r--. 2 boinc boinc    597531 Mar 14 09:19 input.tar.gz
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc 182377111 Mar 14 13:17 HITS.pool.root.1
[2026-03-14 13:20:11] -rw-------. 1 boinc boinc   2447360 Mar 14 13:20 result.tar.gz
13:20:13 (7024): run_atlas exited; CPU time 51515.606285
13:20:13 (7024): called boinc_finish(0)

</stderr_txt>
]]>

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